Overview | |
---|---|
UHGV ID | UHGV-1704388 |
vOTU ID | vOTU-000018 |
Representative Genome? | No |
Source | MGV |
Original genome ID | MGV-GENOME-4354520 |
Associated BioSample | SAMN04261338 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 10.81 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 4 |
CheckV host markers | 3 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9697 |
Virus hallmark genes (geNomad) | 0 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Uncertain - plasmid or chromosomal |
viralVerify score | -5.73 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 18,938 |
GC content | 30.05% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 35 |
CDS density | 84% |
Average CDS length (bps) | 452.31 |
Total tRNA genes | 5 |
Suppressor tRNA genes | 0 |