Overview | |
---|---|
UHGV ID | UHGV-1848862 |
vOTU ID | vOTU-160434 |
Representative Genome? | Yes |
Source | DEVoC |
Original genome ID | ViralSequence1852 |
Associated BioSample | SAMN18819057 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 23.33 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 4 |
CheckV host markers | 2 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9799 |
Virus hallmark genes (geNomad) | 2 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 17.43 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 13,444 |
GC content | 47.53% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 27 |
CDS density | 79% |
Average CDS length (bps) | 395.67 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |