UHGV-1852860 (vOTU-112968)

Viral Genome: UHGV-1852860

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1852860
vOTU ID	vOTU-112968
Representative Genome?	Yes
Source	GFD
Original genome ID	GFD_14.3_NODE_564_length_20497_cov_17.434204
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	52.85 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9822
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	16.22
Jumbo phage	No

Genome content
Genome length (bp)	20,497
GC content	39.07%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	28
CDS density	95%
Average CDS length (bps)	697.61
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 52.85)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1852860_1	phrog_435	76.6	5.1e-22	endolysin	lysis
UniRef90	UHGV-1852860_1	UniRef90_A0A7R7IDZ6	109.0	3.67e-29	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1852860_1	537007.BLAHAN_05253	91.3	7.71e-21	Ami_3	N/A
Pfam	UHGV-1852860_1	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1852860_1	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
PHROG	UHGV-1852860_2	phrog_199	45.7	0.00000000000073	holin	lysis
UniRef90	UHGV-1852860_2	UniRef90_C0EDS3	117.0	1.55e-30	Toxin secretion/phage lysis holin	N/A
Pfam	UHGV-1852860_2	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
COG	UHGV-1852860_2	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1852860_2	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1852860_3	phrog_6616	66.6	2.6e-19	tail protein	tail
UniRef90	UHGV-1852860_3	UniRef90_UPI001D0763AB	301.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1852860_3	1232453.BAIF02000058_gene1641	162.0	1.25e-38	Phage minor structural protein	N/A
COG	UHGV-1852860_3	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1852860_3	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1852860_5	phrog_1194	79.8	3.2e-23	N/A	unknown function
eggNOG-mapper	UHGV-1852860_5	33035.JPJF01000093_gene2242	135.0	7.71e-40	N/A	N/A
structural_annotation	UHGV-1852860_5	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1852860_6	phrog_1535	308.9	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1852860_6	742733.HMPREF9469_01814	343.0	0	tape measure	N/A
COG	UHGV-1852860_6	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1852860_6	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1852860_7	phrog_8355	104.4	3.7e-31	N/A	unknown function
UniRef90	UHGV-1852860_7	UniRef90_UPI0006BBA9AA	149.0	3.36312e-44	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1852860_7	394503.Ccel_3036	110.0	2.13e-29	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1852860_7	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1852860_7	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1852860_8	phrog_8300	69.6	4e-20	N/A	unknown function
eggNOG-mapper	UHGV-1852860_8	1151292.QEW_2425	62.8	0.0000000000265	N/A	N/A
structural_annotation	UHGV-1852860_8	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-1852860_9	phrog_820	113.2	1.7e-33	major tail protein	tail
UniRef90	UHGV-1852860_9	UniRef90_T3DDR1	202.0	0	Phage major tail 2 family protein	N/A
eggNOG-mapper	UHGV-1852860_9	1151292.QEW_2426	202.0	0	N/A	N/A
structural_annotation	UHGV-1852860_9	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1852860_10	phrog_2595	82.9	3.6e-24	head-tail connector protein	connector
UniRef90	UHGV-1852860_10	UniRef90_UPI00164BAA81	137.0	3.22e-39	minor capsid protein	N/A
eggNOG-mapper	UHGV-1852860_10	742740.HMPREF9474_03510	115.0	4.64e-31	N/A	N/A
Pfam	UHGV-1852860_10	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1852860_10	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1852860_11	phrog_556	49.1	0.00000000000011	minor head protein	head and packaging
eggNOG-mapper	UHGV-1852860_11	742740.HMPREF9474_03509	147.0	4.06377e-44	N/A	N/A
PHROG	UHGV-1852860_12	phrog_8710	137.1	5.29999e-41	N/A	unknown function
eggNOG-mapper	UHGV-1852860_12	742740.HMPREF9474_03508	155.0	0	N/A	N/A
structural_annotation	UHGV-1852860_12	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1852860_13	phrog_541	87.2	1.6e-25	head-tail adaptor	connector
eggNOG-mapper	UHGV-1852860_13	33035.JPJF01000093_gene2250	161.0	0	N/A	N/A
PHROG	UHGV-1852860_14	phrog_10541	79.9	2.7e-23	N/A	unknown function
UniRef90	UHGV-1852860_14	UniRef90_A0A841L8S8	82.8	2.24e-18	Rho_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1852860_14	1294142.CINTURNW_1030	82.8	3.28e-19	N/A	N/A
PHROG	UHGV-1852860_15	phrog_212	263.1	0	major head protein	head and packaging
UniRef90	UHGV-1852860_15	UniRef90_A0A2S8XBH2	411.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1852860_15	1294142.CINTURNW_1029	402.0	0	N/A	N/A
structural_annotation	UHGV-1852860_15	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1852860_16	phrog_194	175.2	0	head scaffolding protein	head and packaging
UniRef90	UHGV-1852860_16	UniRef90_UPI0015B46778	189.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1852860_16	1151292.QEW_2434	178.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-1852860_16	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1852860_16	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1852860_19	phrog_581	236.0	0	minor head protein	head and packaging
UniRef90	UHGV-1852860_19	UniRef90_A0A413YU28	469.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1852860_19	742740.HMPREF9474_03503	407.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1852860_19	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1852860_19	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1852860_19	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1852860_20	phrog_25639	78.7	4.9e-23	N/A	unknown function
eggNOG-mapper	UHGV-1852860_20	483218.BACPEC_01160	62.8	0.00000000000324	N/A	N/A
PHROG	UHGV-1852860_21	phrog_533	251.0	0	portal protein	head and packaging
UniRef90	UHGV-1852860_21	UniRef90_A0A174NM20	587.0	0	Phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1852860_21	195103.CPF_0951	528.0	0	N/A	N/A
structural_annotation	UHGV-1852860_21	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1852860_22	K06909	90.2	3.3e-26	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1852860_22	phrog_2	77.8	2.3e-22	terminase large subunit	head and packaging
UniRef90	UHGV-1852860_22	UniRef90_A0A413RCQ1	753.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1852860_22	552396.HMPREF0863_01628	582.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1852860_22	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1852860_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1852860_22	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1852860_23	phrog_309	182.4	0	terminase small subunit	head and packaging
UniRef90	UHGV-1852860_23	UniRef90_UPI000AC737F1	200.0	0	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-1852860_23	411470.RUMGNA_02210	163.0	0	transposase activity	N/A
Pfam	UHGV-1852860_23	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
COG	UHGV-1852860_23	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-1852860_23	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-1852860_24	phrog_36	56.5	6.5e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1852860_24	UniRef90_UPI001F1822AF	56.2	0.000000284	RNA polymerase subunit sigma-24	N/A
eggNOG-mapper	UHGV-1852860_24	397290.C810_01391	94.4	1e-22	N/A	N/A
structural_annotation	UHGV-1852860_24	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-1852860_25	phrog_355	89.5	3.3e-26	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1852860_25	UniRef90_A0A6L5T7G2	117.0	4.03e-31	N/A	N/A
eggNOG-mapper	UHGV-1852860_25	573061.Clocel_3558	83.2	3.19e-19	N/A	N/A
Pfam	UHGV-1852860_25	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-1852860_25	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-1852860_25	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1852860_27	phrog_874	159.6	0	N/A	unknown function
UniRef90	UHGV-1852860_27	UniRef90_A0A3P6JHM7	147.0	2.66e-40	Upf86.8	N/A
eggNOG-mapper	UHGV-1852860_27	1232449.BAHV02000016_gene1832	137.0	1.78e-37	N/A	N/A
structural_annotation	UHGV-1852860_27	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1852860_28	97139.C824_00134	54.3	0.00000011	N/A	N/A