UHGV-1853552 (vOTU-095029)

Viral Genome: UHGV-1853552

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1853552
vOTU ID	vOTU-095029
Representative Genome?	Yes
Source	GFD
Original genome ID	GFD_15.3_NODE_72_length_28803_cov_15.723668
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	63.93 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9822
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	32.49
Jumbo phage	No

Genome content
Genome length (bp)	28,803
GC content	41.99%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	38
CDS density	92%
Average CDS length (bps)	696.63
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 63.93)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1853552_1	K07273	162.8	0	acm; lysozyme	N/A
PHROG	UHGV-1853552_1	phrog_6745	126.4	2.7e-37	endolysin	lysis
UniRef90	UHGV-1853552_1	UniRef90_UPI00191FD049	269.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-1853552_1	476272.RUMHYD_02876	220.0	0	autolytic lysozime (1,4-beta-N-acetylmuramidase), family 25 of glycosyl hydrolases	N/A
Pfam	UHGV-1853552_1	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1853552_1	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-1853552_2	PF07880	N/A	N/A	N/A	N/A
PHROG	UHGV-1853552_3	phrog_18444	79.8	2.2e-23	N/A	unknown function
PHROG	UHGV-1853552_4	phrog_6616	664.3	0	tail protein	tail
UniRef90	UHGV-1853552_4	UniRef90_R5QUN9	617.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1853552_4	33035.JPJF01000043_gene1002	249.0	0	N/A	N/A
structural_annotation	UHGV-1853552_4	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1853552_5	phrog_1194	85.1	6.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-1853552_5	1122918.KB907248_gene4488	52.8	0.000000437	N/A	N/A
structural_annotation	UHGV-1853552_5	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1853552_6	phrog_1535	467.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1853552_6	UniRef90_A0A173R880	835.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1853552_6	476272.RUMHYD_01785	829.0	0	phage tail tape measure protein	N/A
COG	UHGV-1853552_6	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1853552_6	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1853552_7	phrog_706	130.8	1e-38	N/A	unknown function
UniRef90	UHGV-1853552_7	UniRef90_UPI001BAD00AD	207.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1853552_7	411459.RUMOBE_01383	350.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1853552_7	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1853552_7	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1853552_8	phrog_11299	66.1	6.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-1853552_8	411459.RUMOBE_01382	58.2	0.00000000822	N/A	N/A
structural_annotation	UHGV-1853552_8	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1853552_9	phrog_3099	132.5	2.7e-39	N/A	unknown function
eggNOG-mapper	UHGV-1853552_9	411902.CLOBOL_00129	170.0	0	N/A	N/A
structural_annotation	UHGV-1853552_9	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1853552_10	phrog_3266	93.8	1.5e-27	tail completion	connector
eggNOG-mapper	UHGV-1853552_10	476272.RUMHYD_01781	152.0	5.60519e-45	N/A	N/A
structural_annotation	UHGV-1853552_10	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1853552_11	phrog_556	65.0	9.5e-19	minor head protein	head and packaging
UniRef90	UHGV-1853552_11	UniRef90_UPI000E4989EB	273.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1853552_11	476272.RUMHYD_01780	147.0	3.15292e-43	N/A	N/A
Pfam	UHGV-1853552_11	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1853552_11	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1853552_12	phrog_3366	94.2	1.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-1853552_12	476272.RUMHYD_01779	153.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-1853552_12	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1853552_13	phrog_1129	75.6	4.3e-22	holin	lysis
UniRef90	UHGV-1853552_13	UniRef90_A0A395X7B2	170.0	0	Enolase	N/A
eggNOG-mapper	UHGV-1853552_13	411461.DORFOR_00721	114.0	4.03e-32	N/A	N/A
Pfam	UHGV-1853552_13	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1853552_13	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1853552_14	phrog_541	98.6	3.9e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-1853552_14	476272.RUMHYD_01778	108.0	5.47e-28	N/A	N/A
PHROG	UHGV-1853552_15	phrog_544	165.7	0	major head protein	head and packaging
UniRef90	UHGV-1853552_15	UniRef90_A0A395X7A1	666.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1853552_15	1232453.BAIF02000011_gene3359	385.0	0	N/A	N/A
Pfam	UHGV-1853552_15	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1853552_15	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1853552_16	phrog_194	66.9	4.2e-19	head scaffolding protein	head and packaging
UniRef90	UHGV-1853552_16	UniRef90_UPI001D14C9C8	185.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1853552_16	476272.RUMHYD_01775	192.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1853552_16	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-1853552_17	phrog_28802	223.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1853552_17	476272.RUMHYD_01772	197.0	0	N/A	N/A
PHROG	UHGV-1853552_18	phrog_20016	203.6	0	N/A	unknown function
UniRef90	UHGV-1853552_18	UniRef90_A0A285PT46	167.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1853552_18	397290.C810_05214	186.0	0	N/A	N/A
structural_annotation	UHGV-1853552_18	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1853552_19	phrog_16490	197.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1853552_19	397290.C810_01328	173.0	0	N/A	N/A
PHROG	UHGV-1853552_20	phrog_22984	95.1	4.5e-28	N/A	unknown function
PHROG	UHGV-1853552_21	phrog_21718	134.7	4.3e-40	N/A	unknown function
eggNOG-mapper	UHGV-1853552_21	476272.RUMHYD_01768	130.0	7.97e-37	N/A	N/A
UniRef90	UHGV-1853552_22	UniRef90_A0A395X7A4	176.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-1853552_22	476272.RUMHYD_01766	120.0	3.06e-34	N/A	N/A
PHROG	UHGV-1853552_23	phrog_3754	115.5	3.8e-34	N/A	unknown function
eggNOG-mapper	UHGV-1853552_23	476272.RUMHYD_01764	174.0	0	N/A	N/A
PHROG	UHGV-1853552_24	phrog_581	277.1	0	minor head protein	head and packaging
UniRef90	UHGV-1853552_24	UniRef90_A0A412EKN3	800.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1853552_24	33035.JPJF01000106_gene3134	351.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1853552_24	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1853552_24	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1853552_24	PF06152	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1853552_26	476272.RUMHYD_00002	141.0	1.41e-33	N/A	N/A
PHROG	UHGV-1853552_28	phrog_533	283.9	0	portal protein	head and packaging
UniRef90	UHGV-1853552_28	UniRef90_A0A1C6CDM8	699.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1853552_28	33035.JPJF01000106_gene3135	541.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-1853552_28	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1853552_29	411473.RUMCAL_02525	144.0	1.35926e-43	N/A	N/A
KOfam	UHGV-1853552_30	K06909	423.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1853552_30	phrog_3717	167.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1853552_30	UniRef90_UPI001C0ECFC2	967.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1853552_30	33035.JPJF01000106_gene3136	677.0	0	Terminase small subunit	N/A
Pfam	UHGV-1853552_30	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-1853552_30	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1853552_30	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1853552_30	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1853552_30	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1853552_30	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1853552_31	phrog_33130	104.2	5.2e-31	N/A	unknown function
structural_annotation	UHGV-1853552_31	PF10922,MF_00839	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1853552_35	476272.RUMHYD_03348	53.9	0.000000147	N/A	N/A
PHROG	UHGV-1853552_37	phrog_8684	107.6	5.1e-32	N/A	unknown function
UniRef90	UHGV-1853552_37	UniRef90_A0A2V2D5P6	167.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1853552_37	742733.HMPREF9469_00912	135.0	4.06e-39	YopX protein	N/A
Pfam	UHGV-1853552_37	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1853552_37	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1853552_37	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1853552_38	phrog_20593	40.2	0.000000000012	N/A	unknown function