Overview | |
---|---|
UHGV ID | UHGV-1860807 |
vOTU ID | vOTU-001659 |
Representative Genome? | No |
Source | DEVoC |
Original genome ID | ViralSequence1172 |
Associated BioSample | SAMN18794203 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 20.87 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 12 |
CheckV host markers | 0 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.974 |
Virus hallmark genes (geNomad) | 3 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 12.57 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 19,602 |
GC content | 31.64% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 23 |
CDS density | 90% |
Average CDS length (bps) | 765.13 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |