UHGV-1861081 (vOTU-154315)

Viral Genome: UHGV-1861081

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1861081
vOTU ID	vOTU-154315
Representative Genome?	Yes
Source	DEVoC
Original genome ID	ViralSequence928
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	57.51 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	8
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9829
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	26.97
Jumbo phage	No

Genome content
Genome length (bp)	24,274
GC content	52.46%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	34
CDS density	97%
Average CDS length (bps)	694.94
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 57.51)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1861081_1	K08640	95.4	9e-28	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-1861081_1	phrog_18955	152.2	2.8026e-45	N/A	unknown function
UniRef90	UHGV-1861081_1	UniRef90_UPI001C035E39	602.0	0	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-1861081_1	1235797.C816_04171	331.0	0	Peptidase M15	N/A
Pfam	UHGV-1861081_1	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
Pfam	UHGV-1861081_1	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-1861081_1	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1861081_1	PF09992,PF08291,COG4632,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-1861081_2	phrog_199	93.3	2.5e-27	holin	lysis
UniRef90	UHGV-1861081_2	UniRef90_K1UL76	286.0	0	Holin, toxin secretion/phage lysis	N/A
eggNOG-mapper	UHGV-1861081_2	411467.BACCAP_00280	139.0	5.85e-40	Bacteriophage holin family	N/A
Pfam	UHGV-1861081_2	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1861081_2	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1861081_2	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1861081_2	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1861081_5	phrog_37900	74.2	6.6e-25	N/A	unknown function
UniRef90	UHGV-1861081_5	UniRef90_UPI00051B4A1C	293.0	0	N/A	N/A
eggNOG-mapper	UHGV-1861081_5	1519439.JPJG01000060_gene1894	293.0	0	N/A	N/A
Pfam	UHGV-1861081_5	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1861081_5	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1861081_5	PF19789	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1861081_6	PF02973	N/A	N/A	N/A	N/A
PHROG	UHGV-1861081_7	phrog_10993	208.4	0	Hoc-like head decoration	head and packaging
UniRef90	UHGV-1861081_7	UniRef90_K1UI43	341.0	0	N/A	N/A
eggNOG-mapper	UHGV-1861081_7	1121334.KB911071_gene1970	229.0	0	N/A	N/A
Pfam	UHGV-1861081_7	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1861081_7	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1861081_9	phrog_13589	156.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1861081_9	428125.CLOLEP_01434	210.0	0	N/A	N/A
PHROG	UHGV-1861081_10	phrog_31538	52.6	0.0000000000000094	N/A	unknown function
structural_annotation	UHGV-1861081_11	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-1861081_13	phrog_32744	675.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1861081_13	1120998.AUFC01000030_gene2247	233.0	0	N/A	N/A
structural_annotation	UHGV-1861081_13	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1861081_14	phrog_1194	54.7	0.0000000000000016	N/A	unknown function
eggNOG-mapper	UHGV-1861081_14	1226322.HMPREF1545_00060	204.0	0	N/A	N/A
structural_annotation	UHGV-1861081_14	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1861081_15	phrog_1535	91.4	5.4e-28	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1861081_15	693746.OBV_18190	520.0	0	domain protein	N/A
COG	UHGV-1861081_15	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1861081_15	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-1861081_17	phrog_706	125.0	5.2e-37	N/A	unknown function
UniRef90	UHGV-1861081_17	UniRef90_UPI000682A80B	228.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1861081_17	693746.OBV_18170	219.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1861081_17	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1861081_17	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1861081_18	phrog_11299	87.8	1.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-1861081_18	693746.OBV_18160	218.0	0	N/A	N/A
structural_annotation	UHGV-1861081_18	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1861081_19	phrog_3099	96.0	4.4e-28	N/A	unknown function
eggNOG-mapper	UHGV-1861081_19	1226322.HMPREF1545_00056	241.0	0	N/A	N/A
structural_annotation	UHGV-1861081_19	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1861081_20	phrog_3266	52.6	0.0000000000000065	tail completion	connector
eggNOG-mapper	UHGV-1861081_20	1232443.BAIA02000078_gene24	142.0	2.65e-41	N/A	N/A
structural_annotation	UHGV-1861081_20	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1861081_21	phrog_556	69.7	3.4e-20	minor head protein	head and packaging
UniRef90	UHGV-1861081_21	UniRef90_UPI00195E1497	171.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1861081_21	1226322.HMPREF1545_00054	132.0	1e-37	Minor capsid protein	N/A
Pfam	UHGV-1861081_21	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1861081_21	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1861081_22	phrog_3366	91.5	8.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-1861081_22	1226322.HMPREF1545_00053	152.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-1861081_22	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1861081_23	phrog_541	106.1	2.1e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-1861081_23	642492.Clole_0822	65.9	0.00000000000809	N/A	N/A
PHROG	UHGV-1861081_24	phrog_544	190.0	0	major head protein	head and packaging
UniRef90	UHGV-1861081_24	UniRef90_A0A810PZM2	501.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1861081_24	1347392.CCEZ01000005_gene1236	290.0	0	N/A	N/A
structural_annotation	UHGV-1861081_24	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
UniRef90	UHGV-1861081_25	UniRef90_A0A6B9SU02	85.5	3.31e-17	Fibronectin autolysin	N/A
structural_annotation	UHGV-1861081_25	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1861081_26	PF18152	N/A	N/A	N/A	N/A
PHROG	UHGV-1861081_28	phrog_581	287.3	0	minor head protein	head and packaging
UniRef90	UHGV-1861081_28	UniRef90_UPI001D080D49	555.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1861081_28	1226322.HMPREF1545_00046	371.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1861081_28	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1861081_28	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1861081_28	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1861081_29	phrog_533	395.4	0	portal protein	head and packaging
UniRef90	UHGV-1861081_29	UniRef90_A0A1C5N775	585.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1861081_29	1226322.HMPREF1545_00044	552.0	0	N/A	N/A
Pfam	UHGV-1861081_29	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1861081_29	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1861081_30	K06909	114.8	9.2e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1861081_30	phrog_2	116.2	4.8e-34	terminase large subunit	head and packaging
UniRef90	UHGV-1861081_30	UniRef90_A0A3D3Y0N9	414.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1861081_30	1226322.HMPREF1545_00043	392.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1861081_30	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1861081_30	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1861081_30	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1861081_30	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1861081_33	K07319	123.3	2.2e-36	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1861081_33	phrog_498	441.5	0	DNA methyltransferase	other
UniRef90	UHGV-1861081_33	UniRef90_A0A810Q3Z7	438.0	0	N6_N4_Mtase domain-containing protein	N/A
eggNOG-mapper	UHGV-1861081_33	1423758.BN55_01455	425.0	0	DNA methylase	N/A
PADLOC	UHGV-1861081_33	MTase_II_00015	239.5	0	Type II methyltransferase	RM
Pfam	UHGV-1861081_33	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1861081_33	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1861081_33	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1861081_33	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-1861081_34	phrog_872	144.7	5.60519e-45	N/A	unknown function
UniRef90	UHGV-1861081_34	UniRef90_A0A8J6M9F5	199.0	0	N/A	N/A
eggNOG-mapper	UHGV-1861081_34	1519439.JPJG01000060_gene1880	179.0	0	N/A	N/A
Pfam	UHGV-1861081_34	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-1861081_34	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-1861081_34	PF11195	N/A	N/A	N/A	N/A