Overview | |
---|---|
UHGV ID | UHGV-1864569 |
vOTU ID | vOTU-000016 |
Representative Genome? | No |
Source | DEVoC |
Original genome ID | ViralSequence1163 |
Associated BioSample | SAMN18794185 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 43.1 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 7 |
CheckV host markers | 1 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.98 |
Virus hallmark genes (geNomad) | 1 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 13.55 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 19,686 |
GC content | 43.84% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 30 |
CDS density | 93% |
Average CDS length (bps) | 609.40 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |