UHGV-1866112 (vOTU-076802)

Viral Genome: UHGV-1866112

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1866112
vOTU ID	vOTU-076802
Representative Genome?	Yes
Source	DEVoC
Original genome ID	ViralSequence542
Associated BioSample	SAMN18794243
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	93.81 (High-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9811
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	37.26
Jumbo phage	No

Genome content
Genome length (bp)	37,545
GC content	54.52%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	68
CDS density	92%
Average CDS length (bps)	508.94
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 93.81)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1866112_1	phrog_33	42.7	0.000000000013	distal tail protein Dit	tail
UniRef90	UHGV-1866112_1	UniRef90_A0A374UNT1	110.0	4.49e-27	MtfA protein	N/A
eggNOG-mapper	UHGV-1866112_1	877414.ATWA01000019_gene2049	102.0	7.75e-25	N/A	N/A
PHROG	UHGV-1866112_2	phrog_6900	264.8	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1866112_2	1499683.CCFF01000017_gene2565	304.0	0	tape measure	N/A
COG	UHGV-1866112_2	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1866112_2	MF_04138,COG5281	N/A	N/A	N/A	N/A
UniRef90	UHGV-1866112_4	UniRef90_A0A285PXU7	80.9	5.56e-17	Consensus disorder prediction	N/A
PHROG	UHGV-1866112_5	phrog_885	111.6	6.3e-33	major tail protein	tail
UniRef90	UHGV-1866112_5	UniRef90_A0A843J9F0	174.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1866112_5	1111121.HMPREF1247_0789	192.0	0	N/A	N/A
structural_annotation	UHGV-1866112_5	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1866112_6	phrog_17405	43.5	0.0000000000049	head protein	head and packaging
structural_annotation	UHGV-1866112_6	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1866112_7	phrog_17977	95.7	2.8e-28	N/A	unknown function
UniRef90	UHGV-1866112_7	UniRef90_A0A285PT57	108.0	1.84e-28	Phage head-tail joining protein	N/A
structural_annotation	UHGV-1866112_7	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1866112_9	phrog_544	114.6	1e-33	major head protein	head and packaging
UniRef90	UHGV-1866112_9	UniRef90_A0A1C6B5R0	327.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1866112_9	476272.RUMHYD_01776	312.0	0	N/A	N/A
structural_annotation	UHGV-1866112_9	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
UniRef90	UHGV-1866112_10	UniRef90_A0A174AAF6	55.8	0.00000298	Clp R domain-containing protein	N/A
structural_annotation	UHGV-1866112_10	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1866112_14	phrog_5	77.6	2e-22	tail completion or Neck1 protein	connector
UniRef90	UHGV-1866112_14	UniRef90_A0A7X5E1T2	198.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1866112_14	1280685.AUKC01000004_gene1630	112.0	3.1e-30	N/A	N/A
Pfam	UHGV-1866112_14	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1866112_14	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1866112_14	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1866112_15	PF06442,MF_01194,NF000331,COG4014	N/A	N/A	N/A	N/A
PHROG	UHGV-1866112_16	phrog_115	133.2	1.2e-39	minor head protein	head and packaging
UniRef90	UHGV-1866112_16	UniRef90_A0A810PSD3	558.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1866112_16	1504822.CCNO01000013_gene286	196.0	0	cell adhesion	N/A
Pfam	UHGV-1866112_16	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1866112_16	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1866112_16	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1866112_17	phrog_28328	82.0	4.6e-24	N/A	unknown function
eggNOG-mapper	UHGV-1866112_17	428125.CLOLEP_01381	83.6	6.61e-20	N/A	N/A
PHROG	UHGV-1866112_18	phrog_64	161.9	0	portal protein	head and packaging
UniRef90	UHGV-1866112_18	UniRef90_UPI0018A8A301	618.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1866112_18	608534.GCWU000341_02296	57.0	0.00000718	phage portal protein, SPP1	N/A
Pfam	UHGV-1866112_18	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1866112_18	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1866112_19	K06909	123.6	2.2e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1866112_19	phrog_10250	167.3	0	N/A	unknown function
UniRef90	UHGV-1866112_19	UniRef90_A0A3D3Y0N9	695.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1866112_19	1226322.HMPREF1545_00043	608.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1866112_19	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1866112_19	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1866112_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1866112_19	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1866112_22	K03497	53.1	0.0000000000000043	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1866112_22	phrog_21498	290.8	0	N/A	unknown function
UniRef90	UHGV-1866112_22	UniRef90_C7MM70	287.0	0	ParB-like nuclease	N/A
eggNOG-mapper	UHGV-1866112_22	469378.Ccur_02830	287.0	0	DNA binding	N/A
PADLOC	UHGV-1866112_22	MTase_II_00015	90.3	2.8e-26	Type II methyltransferase	RM
Pfam	UHGV-1866112_22	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1866112_22	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1866112_22	PF02195,PF05869,MF_02015,TIGR00180,TIGR01712,COG1475	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1866112_24	693746.OBV_18010	130.0	2.06e-36	N/A	N/A
structural_annotation	UHGV-1866112_24	TIGR01636	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1866112_28	PF06289,COG1582	N/A	N/A	N/A	N/A
PHROG	UHGV-1866112_32	phrog_38832	77.7	1.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-1866112_32	665956.HMPREF1032_00143	73.2	0.0000000000000645	N/A	N/A
structural_annotation	UHGV-1866112_32	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-1866112_34	phrog_111	146.0	1.79366e-43	DNA methyltransferase	other
UniRef90	UHGV-1866112_34	UniRef90_A0A1L5KS67	194.0	0	DNA N-6-adenine-methyltransferase (Dam)	N/A
eggNOG-mapper	UHGV-1866112_34	445972.ANACOL_03344	178.0	0	DNA N-6-adenine-methyltransferase (Dam)	N/A
PADLOC	UHGV-1866112_34	oMTase_00015	162.2	0	orphan methyltransferase	RM
Pfam	UHGV-1866112_34	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
PHROG	UHGV-1866112_35	phrog_757	168.0	0	DNA methyltransferase	other
UniRef90	UHGV-1866112_35	UniRef90_A0A3A6EPW1	258.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1866112_35	748224.HMPREF9436_03069	232.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1866112_35	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1866112_35	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1866112_36	K00390	59.7	1.5e-17	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1866112_36	phrog_424	137.0	1.3e-40	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1866112_36	UniRef90_A0A1H7KWC5	319.0	0	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase	N/A
eggNOG-mapper	UHGV-1866112_36	665956.HMPREF1032_00140	294.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1866112_36	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1866112_36	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1866112_36	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1866112_37	phrog_190	110.4	1.5e-32	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1866112_37	UniRef90_A0A8D9PDD6	258.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-1866112_37	1226322.HMPREF1545_00295	117.0	1.28e-31	N/A	N/A
Pfam	UHGV-1866112_37	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1866112_37	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-1866112_39	K02315	120.4	2.1e-35	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1866112_39	phrog_50	124.6	9.9e-37	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1866112_39	UniRef90_A0A810Q3X8	292.0	0	IstB_IS21 domain-containing protein	N/A
eggNOG-mapper	UHGV-1866112_39	445972.ANACOL_01829	183.0	0	N/A	N/A
Pfam	UHGV-1866112_39	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1866112_39	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1866112_39	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
KOfam	UHGV-1866112_41	K03111	146.5	2.70451e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1866112_41	phrog_44	146.3	1.69557e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1866112_41	UniRef90_A0A350TKS2	195.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1866112_41	1007096.BAGW01000030_gene5	194.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1866112_41	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1866112_41	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1866112_41	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1866112_41	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1866112_41	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1866112_42	phrog_7566	99.0	2.7e-29	N/A	unknown function
UniRef90	UHGV-1866112_42	UniRef90_A0A8D9UHC0	168.0	0	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-1866112_42	693746.OBV_24070	119.0	9.01e-34	N/A	N/A
PHROG	UHGV-1866112_43	phrog_72	44.7	0.000000000001	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1866112_43	UniRef90_A0A8D9PDS2	266.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-1866112_43	445972.ANACOL_01825	128.0	1.13e-35	N/A	N/A
structural_annotation	UHGV-1866112_43	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1866112_44	phrog_155	149.4	2.10195e-44	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1866112_44	UniRef90_UPI00130EB09C	191.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1866112_44	748224.HMPREF9436_03360	174.0	0	ERF superfamily	N/A
Pfam	UHGV-1866112_44	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1866112_44	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1866112_45	phrog_253	81.5	1.2e-23	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1866112_45	UniRef90_A0A8D9PDS3	222.0	0	Resistance protein	N/A
eggNOG-mapper	UHGV-1866112_45	748224.HMPREF9436_03356	104.0	2.6e-26	Siphovirus Gp157	N/A
Pfam	UHGV-1866112_45	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1866112_45	PF05565	N/A	N/A	N/A	N/A
KOfam	UHGV-1866112_48	K22299	42.6	0.000000000013	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1866112_48	phrog_8	48.9	0.00000000000016	transcriptional regulator	transcription regulation
UniRef90	UHGV-1866112_48	UniRef90_A0A096BAN9	62.4	0.0000000000218	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1866112_48	1282665.H353_08829	56.2	0.0000000218	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1866112_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1866112_48	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1866112_48	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1866112_49	phrog_8	40.6	0.000000000055	transcriptional regulator	transcription regulation
UniRef90	UHGV-1866112_49	UniRef90_Q2RLS1	52.8	0.00000148	Transcriptional regulator, XRE family	N/A
eggNOG-mapper	UHGV-1866112_49	264732.Moth_0284	52.8	0.000000248	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1866112_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1866112_49	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1866112_49	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1866112_53	UniRef90_A0A6J6XLY5	72.0	9.28e-16	Unannotated protein	N/A
eggNOG-mapper	UHGV-1866112_53	483216.BACEGG_01163	65.5	0.0000000000000753	N/A	N/A
UniRef90	UHGV-1866112_54	UniRef90_A0A810PZB1	71.6	0.00000000000102	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1866112_54	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1866112_54	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1866112_54	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1866112_55	K06400	274.0	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1866112_55	phrog_95	294.0	0	integrase	integration and excision
UniRef90	UHGV-1866112_55	UniRef90_A0A3A9I9T1	367.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1866112_55	357809.Cphy_2997	293.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-1866112_55	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1866112_55	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1866112_55	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1866112_55	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1866112_56	1226322.HMPREF1545_00079	95.5	3.53e-24	N/A	N/A
structural_annotation	UHGV-1866112_57	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-1866112_58	phrog_20016	170.2	0	N/A	unknown function
UniRef90	UHGV-1866112_58	UniRef90_A0A2Z4QB67	156.0	0	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-1866112_58	1226322.HMPREF1545_00077	148.0	4.2039e-44	N/A	N/A
structural_annotation	UHGV-1866112_58	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1866112_59	phrog_16490	156.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1866112_59	397290.C810_01328	134.0	6.87e-35	N/A	N/A
PHROG	UHGV-1866112_60	phrog_22984	82.4	4.5e-24	N/A	unknown function
PHROG	UHGV-1866112_61	phrog_21718	104.0	1.4e-30	N/A	unknown function
eggNOG-mapper	UHGV-1866112_61	397290.C810_05210	76.6	0.00000000000000155	N/A	N/A
PHROG	UHGV-1866112_62	phrog_3754	109.4	2.8e-32	N/A	unknown function
eggNOG-mapper	UHGV-1866112_62	1226322.HMPREF1545_00073	164.0	0	N/A	N/A
KOfam	UHGV-1866112_64	K01448	44.5	0.0000000000019	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1866112_64	phrog_435	86.0	5.8e-25	endolysin	lysis
UniRef90	UHGV-1866112_64	UniRef90_UPI001BF1661D	421.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1866112_64	994573.T472_0210960	144.0	3.88e-40	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-1866112_64	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1866112_64	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-1866112_64	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1866112_64	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-1866112_65	phrog_199	78.0	1.1e-22	holin	lysis
UniRef90	UHGV-1866112_65	UniRef90_UPI001BEFC888	297.0	0	Phage holin family protein	N/A
eggNOG-mapper	UHGV-1866112_65	1160721.RBI_I01565	135.0	1.21e-38	Bacteriophage holin family	N/A
Pfam	UHGV-1866112_65	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1866112_65	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1866112_65	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1866112_65	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1866112_66	K13925	54.0	0.0000000000000014	pfbA; plasmin and fibronectin-binding protein A	N/A
PHROG	UHGV-1866112_66	phrog_2234	47.6	0.00000000000016	tail spike protein	tail
UniRef90	UHGV-1866112_66	UniRef90_UPI0019264D81	67.8	0.0000000385	right-handed parallel beta-helix repeat-containing protein	N/A
eggNOG-mapper	UHGV-1866112_66	474922.ELA28925	61.2	0.000000934	Glucan 1,3-beta-glucosidase	N/A
Pfam	UHGV-1866112_66	PF12708	N/A	N/A	Pectate lyase superfamily protein	Pectate_lyase_3