UHGV-1868125 (vOTU-119677)

Viral Genome: UHGV-1868125

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1868125
vOTU ID	vOTU-119677
Representative Genome?	Yes
Source	DEVoC
Original genome ID	ViralSequence1067
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	50.2 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	9
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9801
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	37.71
Jumbo phage	No

Genome content
Genome length (bp)	21,178
GC content	52.93%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	31
CDS density	97%
Average CDS length (bps)	664.16
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 50.2)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1868125_2	K07317	48.4	0.00000000000011	K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1868125_2	phrog_21201	70.4	2.3e-20	DNA methyltransferase	other
UniRef90	UHGV-1868125_2	UniRef90_UPI001C033A7E	114.0	6.7e-30	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-1868125_2	592010.GCWU000182_001827	84.3	5.68e-18	site-specific DNA-methyltransferase (adenine-specific) activity	N/A
COG	UHGV-1868125_2	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-1868125_2	PF20473,NF041658	N/A	N/A	N/A	N/A
PHROG	UHGV-1868125_3	phrog_606	87.8	1.2e-25	terminase small subunit	head and packaging
UniRef90	UHGV-1868125_3	UniRef90_UPI00195648BB	173.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1868125_3	397290.C810_05185	147.0	3.1249e-43	DNA-packaging protein gp3	N/A
Pfam	UHGV-1868125_3	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1868125_3	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-1868125_4	K06909	379.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1868125_4	phrog_5653	163.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1868125_4	UniRef90_A0A2U1BEH4	712.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1868125_4	33035.JPJF01000106_gene3136	466.0	0	Terminase small subunit	N/A
Pfam	UHGV-1868125_4	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1868125_4	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1868125_4	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1868125_4	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1868125_4	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1868125_5	phrog_533	361.2	0	portal protein	head and packaging
UniRef90	UHGV-1868125_5	UniRef90_UPI0006C81717	705.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1868125_5	1226322.HMPREF1545_00044	607.0	0	N/A	N/A
Pfam	UHGV-1868125_5	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1868125_5	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1868125_7	phrog_8680	220.4	0	N/A	unknown function
UniRef90	UHGV-1868125_7	UniRef90_A0A3R6D7I3	250.0	0	N/A	N/A
eggNOG-mapper	UHGV-1868125_7	411470.RUMGNA_02208	224.0	0	N/A	N/A
Pfam	UHGV-1868125_7	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-1868125_7	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-1868125_8	phrog_581	285.7	0	minor head protein	head and packaging
UniRef90	UHGV-1868125_8	UniRef90_UPI001D080D49	566.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1868125_8	1226322.HMPREF1545_00046	376.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1868125_8	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1868125_8	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1868125_8	PF06152	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1868125_10	PF19593	N/A	N/A	N/A	N/A
UniRef90	UHGV-1868125_11	UniRef90_A0A2Z4Q9Y8	74.7	0.000000000000175	Minor structural protein	N/A
eggNOG-mapper	UHGV-1868125_11	1232443.BAIA02000078_gene31	90.1	1.88e-20	N/A	N/A
structural_annotation	UHGV-1868125_11	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1868125_12	phrog_10	167.1	0	major head protein	head and packaging
UniRef90	UHGV-1868125_12	UniRef90_UPI0006C7DD66	455.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1868125_12	1226322.HMPREF1545_00050	446.0	0	Phage capsid family	N/A
Pfam	UHGV-1868125_12	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1868125_12	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1868125_12	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1868125_12	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
Pfam	UHGV-1868125_13	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-1868125_13	COG2247	N/A	N/A	Putative cell wall-binding domain (amidase enhancer), LytB superfamily	N/A
PHROG	UHGV-1868125_14	phrog_541	106.7	1.4e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-1868125_14	642492.Clole_0822	66.2	0.00000000000559	N/A	N/A
PHROG	UHGV-1868125_15	phrog_3366	85.2	8.2e-25	N/A	unknown function
eggNOG-mapper	UHGV-1868125_15	1226322.HMPREF1545_00053	161.0	0	N/A	N/A
structural_annotation	UHGV-1868125_15	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1868125_16	phrog_556	74.4	1.4e-21	minor head protein	head and packaging
UniRef90	UHGV-1868125_16	UniRef90_UPI00195E1497	159.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1868125_16	1226322.HMPREF1545_00054	121.0	1.24e-33	Minor capsid protein	N/A
Pfam	UHGV-1868125_16	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1868125_16	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1868125_17	phrog_3266	54.1	0.0000000000000024	tail completion	connector
eggNOG-mapper	UHGV-1868125_17	1232443.BAIA02000078_gene24	140.0	1.52e-40	N/A	N/A
structural_annotation	UHGV-1868125_17	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1868125_18	phrog_3099	93.5	2.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-1868125_18	1226322.HMPREF1545_00056	254.0	0	N/A	N/A
structural_annotation	UHGV-1868125_18	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1868125_19	phrog_11299	74.1	2.2e-21	N/A	unknown function
eggNOG-mapper	UHGV-1868125_19	693746.OBV_18160	194.0	0	N/A	N/A
structural_annotation	UHGV-1868125_19	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1868125_20	phrog_706	119.5	2.7e-35	N/A	unknown function
UniRef90	UHGV-1868125_20	UniRef90_UPI000682A80B	235.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1868125_20	693746.OBV_18170	226.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1868125_20	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1868125_20	PF06854	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1868125_21	PF02883,MF_00791,TIGR04209,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-1868125_22	phrog_1535	92.4	2.7e-37	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1868125_22	693746.OBV_18190	240.0	0	domain protein	N/A
COG	UHGV-1868125_22	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1868125_22	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-1868125_23	phrog_1194	56.7	4.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-1868125_23	1226322.HMPREF1545_00060	209.0	0	N/A	N/A
structural_annotation	UHGV-1868125_23	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1868125_24	phrog_32744	488.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1868125_24	1120998.AUFC01000030_gene2247	230.0	0	N/A	N/A
structural_annotation	UHGV-1868125_24	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1868125_26	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-1868125_27	phrog_31538	41.0	0.000000000039	N/A	unknown function
PHROG	UHGV-1868125_28	phrog_13589	188.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1868125_28	428125.CLOLEP_01434	230.0	0	N/A	N/A
eggNOG-mapper	UHGV-1868125_29	742733.HMPREF9469_05008	50.4	0.00000349	N/A	N/A
Pfam	UHGV-1868125_30	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1868125_30	PF19789	N/A	N/A	N/A	N/A