Overview | |
---|---|
UHGV ID | UHGV-1869430 |
vOTU ID | vOTU-168743 |
Representative Genome? | Yes |
Source | DEVoC |
Original genome ID | ViralSequence1192 |
Associated BioSample | SAMN18819049 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 45.44 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 10 |
CheckV host markers | 0 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9834 |
Virus hallmark genes (geNomad) | 5 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 21.84 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 19,365 |
GC content | 51.49% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 29 |
CDS density | 90% |
Average CDS length (bps) | 603.10 |
Total tRNA genes | 2 |
Suppressor tRNA genes | 0 |