Overview | |
---|---|
UHGV ID | UHGV-1871384 |
vOTU ID | vOTU-099404 |
Representative Genome? | Yes |
Source | DEVoC |
Original genome ID | ViralSequence1225 |
Associated BioSample | SAMN18819055 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 41.8 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 11 |
CheckV host markers | 0 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9832 |
Virus hallmark genes (geNomad) | 5 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 28.84 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 18,795 |
GC content | 43.21% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 31 |
CDS density | 90% |
Average CDS length (bps) | 547.07 |
Total tRNA genes | 1 |
Suppressor tRNA genes | 0 |