Overview | |
---|---|
UHGV ID | UHGV-1880012 |
vOTU ID | vOTU-020246 |
Representative Genome? | Yes |
Source | DEVoC |
Original genome ID | ViralSequence1185 |
Associated BioSample | SAMN18819112 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 45.68 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 9 |
CheckV host markers | 0 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9823 |
Virus hallmark genes (geNomad) | 7 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 28.45 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 19,425 |
GC content | 55.54% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 28 |
CDS density | 96% |
Average CDS length (bps) | 663.43 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |