UHGV-1922608 (vOTU-083414)

Viral Genome: UHGV-1922608

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1922608
vOTU ID	vOTU-083414
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300008100\|Ga0114174_100010\|provirus_70440_103607
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	93.6 (High-quality)
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9771
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	53.93
Jumbo phage	No

Genome content
Genome length (bp)	33,168
GC content	45.47%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	49
CDS density	93%
Average CDS length (bps)	630.67
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 93.6)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1922608_1	phrog_10292	54.3	5.1e-16	N/A	unknown function
UniRef90	UHGV-1922608_1	UniRef90_R6T9F1	270.0	0	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1922608_1	537013.CLOSTMETH_02269	85.5	1.56e-19	TM2 domain	N/A
Pfam	UHGV-1922608_1	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1922608_1	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-1922608_2	K01356	120.8	1.9e-35	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1922608_2	phrog_4	135.3	5e-40	transcriptional repressor	transcription regulation
UniRef90	UHGV-1922608_2	UniRef90_R6T2B0	434.0	0	Peptidase S24-like protein	N/A
eggNOG-mapper	UHGV-1922608_2	246199.CUS_5911	235.0	0	N/A	N/A
Pfam	UHGV-1922608_2	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
Pfam	UHGV-1922608_2	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1922608_2	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1922608_2	PF00717,PF12844,MF_00015,TIGR00498,TIGR03070,COG1974,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1922608_3	UniRef90_R6TEQ2	142.0	2.67648e-43	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1922608_3	246199.CUS_5910	120.0	4.55e-35	N/A	N/A
structural_annotation	UHGV-1922608_3	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_5	phrog_750	74.1	1.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-1922608_5	742723.HMPREF9477_00931	99.8	6.32e-26	N/A	N/A
structural_annotation	UHGV-1922608_5	PF13835,NF040858	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1922608_8	PF01775,MF_00273,NF010188	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_12	phrog_38338	101.4	8.3e-30	N/A	unknown function
UniRef90	UHGV-1922608_12	UniRef90_UPI00137B3A8C	89.4	4.99e-20	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-1922608_12	693746.OBV_25410	83.2	6.32e-19	N/A	N/A
PHROG	UHGV-1922608_13	phrog_8470	206.5	0	N/A	unknown function
UniRef90	UHGV-1922608_13	UniRef90_UPI0019175B9C	313.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1922608_13	641112.ACOK01000073_gene2870	402.0	0	PcfJ-like protein	N/A
Pfam	UHGV-1922608_13	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1922608_13	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_14	phrog_15609	99.7	2.5e-29	N/A	unknown function
UniRef90	UHGV-1922608_14	UniRef90_A0A373SLQ6	572.0	0	N/A	N/A
eggNOG-mapper	UHGV-1922608_14	641112.ACOK01000073_gene2872	93.2	2.6e-19	N/A	N/A
Pfam	UHGV-1922608_14	PF11300	N/A	N/A	N/A	DUF3102
structural_annotation	UHGV-1922608_14	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_15	phrog_253	111.6	5.8e-33	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1922608_15	UniRef90_UPI0019171ADA	117.0	7.66e-30	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-1922608_15	881621.LIV_2167	75.5	0.0000000000000084	Siphovirus Gp157	N/A
Pfam	UHGV-1922608_15	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1922608_15	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_16	phrog_2872	246.1	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1922608_16	UniRef90_A0A373VPJ3	393.0	0	ATP-binding protein (Fragment)	N/A
eggNOG-mapper	UHGV-1922608_16	754027.HMPREF9554_00709	214.0	0	N/A	N/A
Pfam	UHGV-1922608_16	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1922608_16	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-1922608_17	K19789	323.8	0	radD; DNA repair protein RadD	N/A
PHROG	UHGV-1922608_17	phrog_16	276.5	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1922608_17	UniRef90_A0A356CZA9	894.0	0	Helicase	N/A
eggNOG-mapper	UHGV-1922608_17	1410670.JHXF01000015_gene2270	589.0	0	helicase	N/A
PADLOC	UHGV-1922608_17	mREase_IV_00005	103.1	5.2e-31	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1922608_17	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1922608_17	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1922608_17	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-1922608_17	PF04851,PF00271,MF_01489,TIGR04095,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_18	phrog_5702	79.5	2.1e-23	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1922608_18	UniRef90_A0A373SNE0	206.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1922608_18	1410670.JHXF01000015_gene2271	139.0	2.07995e-41	VRR_NUC	N/A
Pfam	UHGV-1922608_18	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-1922608_18	PF03838,MF_00130,NF002585,COG3331	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_19	phrog_378	96.9	2.7e-28	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1922608_19	UniRef90_A0A373SL44	375.0	0	N/A	N/A
eggNOG-mapper	UHGV-1922608_19	1423807.BACO01000050_gene1454	79.7	4.36e-16	N/A	N/A
Pfam	UHGV-1922608_19	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-1922608_19	PF05037,NF004948	N/A	N/A	N/A	N/A
KOfam	UHGV-1922608_20	K06919	109.5	3.1e-32	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-1922608_20	phrog_1829	855.1	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1922608_20	UniRef90_A0A356CZ91	1536.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-1922608_20	1410670.JHXF01000015_gene2274	835.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-1922608_20	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-1922608_20	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-1922608_20	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-1922608_20	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-1922608_20	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-1922608_20	PF08706,PF05272,PF02257,MF_04000,NF011296,COG3378,COG4983	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1922608_22	PF07374,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-1922608_25	K06909	423.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1922608_25	phrog_18557	160.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1922608_25	UniRef90_A0A1C6IMR2	1073.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1922608_25	411461.DORFOR_01162	667.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1922608_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1922608_25	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1922608_25	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1922608_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1922608_25	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_26	phrog_533	347.0	0	portal protein	head and packaging
UniRef90	UHGV-1922608_26	UniRef90_R6TDI6	890.0	0	Phage portal protein SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-1922608_26	1304866.K413DRAFT_3035	438.0	0	N/A	N/A
structural_annotation	UHGV-1922608_26	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_27	phrog_581	335.0	0	minor head protein	head and packaging
UniRef90	UHGV-1922608_27	UniRef90_R6SXL7	1003.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1922608_27	658655.HMPREF0988_02563	409.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1922608_27	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1922608_27	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1922608_27	PF06152	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1922608_28	PF12305	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_29	phrog_194	104.5	1.2e-30	head scaffolding protein	head and packaging
UniRef90	UHGV-1922608_29	UniRef90_R6U550	373.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1922608_29	742765.HMPREF9457_02126	152.0	3.22299e-44	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1922608_29	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1922608_29	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_30	phrog_544	345.2	0	major head protein	head and packaging
UniRef90	UHGV-1922608_30	UniRef90_R6T873	667.0	0	Major head protein	N/A
eggNOG-mapper	UHGV-1922608_30	936580.HMPREF1516_0718	315.0	0	N/A	N/A
NCBIFam	UHGV-1922608_30	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1922608_30	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_31	phrog_541	93.0	2.5e-27	head-tail adaptor	connector
UniRef90	UHGV-1922608_31	UniRef90_A0A371AQT0	102.0	1e-25	N/A	N/A
eggNOG-mapper	UHGV-1922608_31	1304866.K413DRAFT_3039	96.7	3.51e-24	N/A	N/A
PHROG	UHGV-1922608_32	phrog_3366	79.6	3.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-1922608_32	1449050.JNLE01000003_gene3887	83.6	3.86e-19	N/A	N/A
Pfam	UHGV-1922608_32	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1922608_32	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_33	phrog_556	124.2	4.4e-37	minor head protein	head and packaging
UniRef90	UHGV-1922608_33	UniRef90_UPI00143BEF55	125.0	3.43e-34	minor capsid protein	N/A
eggNOG-mapper	UHGV-1922608_33	1449050.JNLE01000003_gene3886	107.0	9.02e-28	N/A	N/A
Pfam	UHGV-1922608_33	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1922608_33	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_34	phrog_3266	123.2	1.2e-36	tail completion	connector
eggNOG-mapper	UHGV-1922608_34	411902.CLOBOL_00130	112.0	1.08e-29	N/A	N/A
structural_annotation	UHGV-1922608_34	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_35	phrog_3099	147.4	7.00649e-44	N/A	unknown function
eggNOG-mapper	UHGV-1922608_35	1160721.RBI_II00532	206.0	0	N/A	N/A
structural_annotation	UHGV-1922608_35	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_36	phrog_11299	184.8	0	N/A	unknown function
structural_annotation	UHGV-1922608_36	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_37	phrog_706	146.7	1.30321e-43	N/A	unknown function
UniRef90	UHGV-1922608_37	UniRef90_UPI001B3C82AE	216.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1922608_37	1449050.JNLE01000003_gene3882	197.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1922608_37	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1922608_37	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_38	phrog_1535	308.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1922608_38	UniRef90_R6TDK7	1226.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-1922608_38	1226322.HMPREF1545_00059	391.0	0	tape measure	N/A
COG	UHGV-1922608_38	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1922608_38	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_39	phrog_1194	89.7	2.6e-26	N/A	unknown function
eggNOG-mapper	UHGV-1922608_39	1160721.RBI_II00527	207.0	0	N/A	N/A
structural_annotation	UHGV-1922608_39	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_40	phrog_9680	53.9	1e-16	host range and adsorption protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1922608_40	UniRef90_R5LL83	70.1	0.00000000158	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-1922608_40	1160721.RBI_II00526	507.0	0	N/A	N/A
structural_annotation	UHGV-1922608_40	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1922608_42	1410617.JHXH01000006_gene232	84.7	1.59e-16	N/A	N/A
structural_annotation	UHGV-1922608_42	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_45	phrog_134	43.5	0.0000000000042	N/A	unknown function
UniRef90	UHGV-1922608_45	UniRef90_A0A373VFP4	105.0	4.05e-29	XkdX family protein	N/A
eggNOG-mapper	UHGV-1922608_45	1298920.KI911353_gene543	60.1	0.00000000000875	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-1922608_45	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-1922608_45	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-1922608_46	phrog_13256	80.1	1.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-1922608_46	1160721.RBI_II00522	93.2	1.79e-24	N/A	N/A
PHROG	UHGV-1922608_47	phrog_1863	58.3	1.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-1922608_47	1226322.HMPREF1545_04027	72.4	0.00000000000000111	N/A	N/A
KOfam	UHGV-1922608_48	K07273	217.9	0	acm; lysozyme	N/A
PHROG	UHGV-1922608_48	phrog_291	181.2	0	endolysin	lysis
UniRef90	UHGV-1922608_48	UniRef90_A0A1C6IMI8	511.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-1922608_48	246199.CUS_5914	298.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1922608_48	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1922608_48	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-1922608_48	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1922608_48	PF01183,MF_02227,NF002576,COG3757	N/A	N/A	N/A	N/A