UHGV-1923191 (vOTU-072893)

Viral Genome: UHGV-1923191

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1923191
vOTU ID	vOTU-072893
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300007801\|Ga0105807_100347
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	87.4 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9786
Virus hallmark genes (geNomad)	15
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	52.91
Jumbo phage	No

Genome content
Genome length (bp)	30,917
GC content	50.22%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	52
CDS density	94%
Average CDS length (bps)	559.90
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 87.4)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1923191_1	K03529	45.0	0.00000000000059	smc; chromosome segregation protein	N/A
PHROG	UHGV-1923191_1	phrog_21084	181.4	0	recombinase	other
UniRef90	UHGV-1923191_1	UniRef90_UPI001D060172	629.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1923191_1	1382358.JHVN01000024_gene1691	281.0	0	N/A	N/A
COG	UHGV-1923191_1	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1923191_1	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
KOfam	UHGV-1923191_2	K07455	101.8	9.7e-30	recT; recombination protein RecT	N/A
PHROG	UHGV-1923191_2	phrog_148	93.6	2.1e-27	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1923191_2	UniRef90_UPI0008ECD644	395.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-1923191_2	1121085.AUCI01000010_gene513	94.0	3.98e-19	RecT family	N/A
Pfam	UHGV-1923191_2	PF03837	N/A	N/A	RecT family	RecT
structural_annotation	UHGV-1923191_2	PF03837,NF007351	N/A	N/A	N/A	N/A
KOfam	UHGV-1923191_3	K06167	43.7	0.0000000000032	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-1923191_3	phrog_392	139.2	3.59994e-41	metal-dependent hydrolase	other
UniRef90	UHGV-1923191_3	UniRef90_UPI001D06240E	228.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-1923191_3	1027292.HMPREF9372_3394	144.0	3.64e-40	Beta-lactamase superfamily domain	N/A
Pfam	UHGV-1923191_3	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-1923191_3	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1923191_3	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_4	phrog_2514	86.3	3.4e-25	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1923191_4	UniRef90_A0A356Z6K6	133.0	1.24e-36	DNA replication protein DnaD (Fragment)	N/A
eggNOG-mapper	UHGV-1923191_4	1321778.HMPREF1982_02671	112.0	6.18e-28	DnaD domain protein	N/A
COG	UHGV-1923191_4	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
KOfam	UHGV-1923191_5	K02315	170.6	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1923191_5	phrog_50	157.2	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1923191_5	UniRef90_UPI0018A8E70C	207.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1923191_5	203119.Cthe_2467	198.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-1923191_5	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-1923191_5	NF005992.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-1923191_5	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1923191_5	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_6	phrog_236	96.7	4.9e-28	nucleotide kinase	other
UniRef90	UHGV-1923191_6	UniRef90_A0A848EVQ9	111.0	8.26e-30	N/A	N/A
eggNOG-mapper	UHGV-1923191_6	706434.HMPREF9429_00388	94.7	7.29e-24	N/A	N/A
Pfam	UHGV-1923191_6	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-1923191_6	PF11753	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_7	phrog_6721	261.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1923191_7	904296.HMPREF9124_0807	245.0	0	N/A	N/A
structural_annotation	UHGV-1923191_7	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
KOfam	UHGV-1923191_10	K03111	137.8	1.2e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1923191_10	phrog_44	134.0	1.1e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1923191_10	UniRef90_D2RN22	226.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1923191_10	591001.Acfer_0039	226.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1923191_10	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1923191_10	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1923191_10	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1923191_10	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1923191_10	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_11	phrog_824	44.3	0.0000000000029	N/A	unknown function
UniRef90	UHGV-1923191_11	UniRef90_UPI001D0184F4	182.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1923191_11	1123288.SOV_4c02500	91.7	9.05e-23	Archaeal holliday junction resolvase (hjc)	N/A
Pfam	UHGV-1923191_11	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-1923191_11	PF18743,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_14	phrog_36	58.8	1.2e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1923191_14	UniRef90_A0A6N7VYZ5	70.1	0.00000000000249	N/A	N/A
eggNOG-mapper	UHGV-1923191_14	1111454.HMPREF1250_1040	66.6	0.00000000000658	N/A	N/A
Pfam	UHGV-1923191_14	PF07374	N/A	N/A	N/A	DUF1492
KOfam	UHGV-1923191_15	K07451	47.5	0.00000000000034	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1923191_15	phrog_144	75.6	6.9e-22	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1923191_15	UniRef90_UPI00138AE710	167.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1923191_15	1304866.K413DRAFT_1217	105.0	2.59e-27	HNH nucleases	N/A
Pfam	UHGV-1923191_15	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-1923191_16	phrog_13845	120.0	7.7e-36	N/A	unknown function
eggNOG-mapper	UHGV-1923191_16	1399942.U3PDR2_9CAUD	120.0	1.43e-33	N/A	N/A
structural_annotation	UHGV-1923191_16	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_17	phrog_9	260.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1923191_17	UniRef90_UPI000406183D	992.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1923191_17	508419.F8J159_9CAUD	614.0	0	Phage Terminase	N/A
Pfam	UHGV-1923191_17	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1923191_17	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-1923191_17	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_18	phrog_12	173.6	0	portal protein	head and packaging
UniRef90	UHGV-1923191_18	UniRef90_UPI0003FDC1C6	632.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1923191_18	742738.HMPREF9460_01364	316.0	0	Portal protein	N/A
Pfam	UHGV-1923191_18	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1923191_18	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1923191_18	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1923191_18	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1923191_19	K06904	86.4	4.4e-25	N/A	N/A
PHROG	UHGV-1923191_19	phrog_80	111.4	1.2e-32	head maturation protease	head and packaging
UniRef90	UHGV-1923191_19	UniRef90_UPI000415264F	301.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-1923191_19	1285586.H131_21307	136.0	7.6e-38	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1923191_19	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1923191_19	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1923191_19	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1923191_19	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_20	phrog_10	234.6	0	major head protein	head and packaging
UniRef90	UHGV-1923191_20	UniRef90_UPI000400CBEC	475.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1923191_20	903814.ELI_1299	343.0	0	Phage capsid family	N/A
Pfam	UHGV-1923191_20	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1923191_20	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1923191_20	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1923191_20	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_21	phrog_2616	45.6	0.0000000000014	N/A	unknown function
structural_annotation	UHGV-1923191_21	PF01281	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_22	phrog_40	46.2	0.00000000000069	head-tail adaptor Ad1	connector
UniRef90	UHGV-1923191_22	UniRef90_UPI00041E0DD1	167.0	0	head-tail connector protein	N/A
eggNOG-mapper	UHGV-1923191_22	632245.CLP_2916	81.6	6.76e-19	Phage gp6-like head-tail connector protein	N/A
NCBIFam	UHGV-1923191_22	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-1923191_22	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_23	phrog_25	61.1	1.8e-17	head closure Hc1	connector
UniRef90	UHGV-1923191_23	UniRef90_UPI000415E870	186.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-1923191_23	1285586.H131_21292	87.4	8.04e-21	Phage head-tail joining protein	N/A
Pfam	UHGV-1923191_23	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1923191_23	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1923191_23	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1923191_23	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1923191_24	UniRef90_UPI000410849E	236.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1923191_24	1095747.HMPREF1049_2007	89.0	1.56e-20	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1923191_24	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1923191_24	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_25	phrog_525	53.1	0.0000000000000025	N/A	unknown function
Pfam	UHGV-1923191_25	PF20765	N/A	N/A	N/A	DUF6838
PHROG	UHGV-1923191_26	phrog_1480	313.7	0	tail sheath	tail
UniRef90	UHGV-1923191_26	UniRef90_A0A7X2XHA8	378.0	0	Phage tail sheath protein	N/A
eggNOG-mapper	UHGV-1923191_26	1095747.HMPREF1049_2005	245.0	0	Phage tail sheath C-terminal domain	N/A
Pfam	UHGV-1923191_26	PF17482	N/A	N/A	Phage tail sheath C-terminal domain	Phage_sheath_1C
structural_annotation	UHGV-1923191_26	PF10758,COG3497	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_27	phrog_365	116.2	1.9e-34	tail protein	tail
UniRef90	UHGV-1923191_27	UniRef90_UPI000429BBBA	248.0	0	phage tail tube protein	N/A
eggNOG-mapper	UHGV-1923191_27	536232.CLM_1667	109.0	1.39e-28	Phage tail tube protein	N/A
Pfam	UHGV-1923191_27	PF09393	N/A	N/A	Phage tail tube protein	DUF2001
structural_annotation	UHGV-1923191_27	PF09393,TIGR02241,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_28	phrog_4976	55.8	9.2e-16	tail assembly chaperone	tail
UniRef90	UHGV-1923191_28	UniRef90_A0A162J0C0	55.5	0.000000411	Phage portal protein	N/A
eggNOG-mapper	UHGV-1923191_28	632245.CLP_2608	60.5	0.000000000756	N/A	N/A
structural_annotation	UHGV-1923191_28	PF08890,TIGR01674	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_30	phrog_7972	194.0	0	N/A	unknown function
UniRef90	UHGV-1923191_30	UniRef90_A0A8G0NSD2	179.0	2.10195e-44	Phage tail protein	N/A
eggNOG-mapper	UHGV-1923191_30	469617.FUAG_00846	210.0	0	tape measure	N/A
COG	UHGV-1923191_30	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-1923191_31	phrog_5184	94.5	7.8e-28	N/A	unknown function
UniRef90	UHGV-1923191_31	UniRef90_UPI000C0691FE	95.9	4.23e-22	phage portal protein	N/A
eggNOG-mapper	UHGV-1923191_31	1285586.H131_21257	54.3	0.000000562	LysM domain	N/A
COG	UHGV-1923191_31	COG1652	N/A	N/A	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	N/A
PHROG	UHGV-1923191_32	phrog_400	191.4	0	tail protein	tail
UniRef90	UHGV-1923191_32	UniRef90_UPI000F0469E9	125.0	9.63e-29	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1923191_32	1449126.JQKL01000051_gene3158	148.0	4.04e-39	N/A	N/A
COG	UHGV-1923191_32	COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1923191_32	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_33	phrog_579	56.6	4.2e-16	N/A	unknown function
UniRef90	UHGV-1923191_33	UniRef90_UPI001D082D0B	265.0	0	N/A	N/A
eggNOG-mapper	UHGV-1923191_33	1095747.HMPREF1049_1996	57.0	0.0000000391	N/A	N/A
Pfam	UHGV-1923191_33	PF10844	N/A	N/A	N/A	DUF2577
structural_annotation	UHGV-1923191_33	PF10844	N/A	N/A	N/A	N/A
UniRef90	UHGV-1923191_34	UniRef90_UPI001D06F821	306.0	0	N/A	N/A
Pfam	UHGV-1923191_34	PF10934	N/A	N/A	N/A	DUF2634
COG	UHGV-1923191_34	COG3628	N/A	N/A	Phage baseplate assembly protein W	N/A
structural_annotation	UHGV-1923191_34	PF10934,TIGR03357,COG3628	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_35	phrog_6	200.9	0	baseplate protein	tail
UniRef90	UHGV-1923191_35	UniRef90_UPI001D063BBB	684.0	0	baseplate J/gp47 family protein	N/A
eggNOG-mapper	UHGV-1923191_35	1123239.KB898628_gene3248	288.0	0	Baseplate J-like protein	N/A
Pfam	UHGV-1923191_35	PF04865	N/A	N/A	Baseplate J-like protein	Baseplate_J
COG	UHGV-1923191_35	COG3299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1923191_35	PF04865,PF21379,MF_04102,TIGR02243,COG3299	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_36	phrog_521	67.8	1.3e-19	tail protein	tail
UniRef90	UHGV-1923191_36	UniRef90_UPI000478E68D	327.0	0	N/A	N/A
COG	UHGV-1923191_36	COG3778	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1923191_36	PF10076,TIGR02242,COG3778	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1923191_38	910314.HMPREF9220_1078	120.0	5.1e-34	N/A	N/A
structural_annotation	UHGV-1923191_38	PF16407,NF032891,COG5456	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1923191_40	411473.RUMCAL_00421	59.7	0.00000000066	tail collar domain protein	N/A
COG	UHGV-1923191_40	COG4675	N/A	N/A	Phage tail collar domain	N/A
UniRef90	UHGV-1923191_41	UniRef90_R6WL35	80.9	1.64e-16	Side tail fiber protein from lambdoid prophage Rac	N/A
eggNOG-mapper	UHGV-1923191_41	1200557.JHWV01000006_gene1705	94.4	4.58e-21	Membrane	N/A
COG	UHGV-1923191_41	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
eggNOG-mapper	UHGV-1923191_43	1273103.NM10_08099	118.0	1.05e-31	N/A	N/A
structural_annotation	UHGV-1923191_43	NF012201	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_44	phrog_32639	42.2	0.000000000017	N/A	unknown function
eggNOG-mapper	UHGV-1923191_47	568816.Acin_1951	53.1	0.0000000102	N/A	N/A
PHROG	UHGV-1923191_48	phrog_5867	133.0	1.4e-39	endolysin	lysis
UniRef90	UHGV-1923191_48	UniRef90_UPI001D06C26B	420.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1923191_48	500635.MITSMUL_03167	265.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1923191_48	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
structural_annotation	UHGV-1923191_48	MF_04111	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_49	phrog_21498	252.3	0	N/A	unknown function
UniRef90	UHGV-1923191_49	UniRef90_A0A7X2P836	236.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-1923191_49	1095750.HMPREF9970_2290	217.0	0	chromosome segregation	N/A
COG	UHGV-1923191_49	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1923191_49	PF05869,TIGR01712	N/A	N/A	N/A	N/A
PHROG	UHGV-1923191_50	phrog_18996	42.9	0.000000000007	N/A	unknown function
eggNOG-mapper	UHGV-1923191_50	1273103.NM10_01746	118.0	2.05e-33	N/A	N/A
eggNOG-mapper	UHGV-1923191_51	568816.Acin_2131	250.0	0	N/A	N/A
KOfam	UHGV-1923191_52	K16089	74.8	1.4e-21	TC.FEV.OM2, cirA, cfrA, hmuR; outer membrane receptor for ferrienterochelin and colicins	N/A
UniRef90	UHGV-1923191_52	UniRef90_A0A447JQE5	58.9	0.0000000166	Vitamin B12 receptor protein	N/A
eggNOG-mapper	UHGV-1923191_52	568816.Acin_2130	220.0	0	TonB-dependent receptor	N/A
Pfam	UHGV-1923191_52	PF07715	N/A	N/A	TonB-dependent Receptor Plug Domain	Plug
COG	UHGV-1923191_52	COG1629	N/A	N/A	Outer membrane receptor protein, Fe transport	N/A