Overview | |
---|---|
UHGV ID | UHGV-1937322 |
vOTU ID | vOTU-005067 |
Representative Genome? | No |
Source | IMGVR4 |
Original genome ID | 3300007222|Ga0104061_100412|provirus_903_52588 |
Associated BioSample | N/A |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 49.39 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 6 |
CheckV host markers | 5 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9645 |
Virus hallmark genes (geNomad) | 1 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 24.52 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 51,686 |
GC content | 43.03% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 89 |
CDS density | 84% |
Average CDS length (bps) | 484.96 |
Total tRNA genes | 8 |
Suppressor tRNA genes | 1 |