UHGV-1964681 (vOTU-123115)

Viral Genome: UHGV-1964681

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1964681
vOTU ID	vOTU-123115
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300023491\|Ga0257045_100469
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	89.5 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9826
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	39.9
Jumbo phage	No

Genome content
Genome length (bp)	36,227
GC content	51.81%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	67
CDS density	95%
Average CDS length (bps)	513.58
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 89.5)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1964681_1	1408437.JNJN01000043_gene801	81.6	4.78e-17	N/A	N/A
PHROG	UHGV-1964681_4	phrog_30113	273.9	0	N/A	unknown function
UniRef90	UHGV-1964681_4	UniRef90_A0A3D3Y6T9	470.0	0	N/A	N/A
eggNOG-mapper	UHGV-1964681_4	77635.BISU_0173	225.0	0	N/A	N/A
Pfam	UHGV-1964681_4	PF12686	N/A	N/A	N/A	DUF3800
structural_annotation	UHGV-1964681_4	PF01351,MF_00052_A,TIGR00729,COG1039	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1964681_5	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1964681_6	K01447	116.2	4.1e-34	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1964681_6	phrog_833	118.7	6.4e-35	endolysin	lysis
UniRef90	UHGV-1964681_6	UniRef90_A0A1V5KCB7	255.0	0	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
eggNOG-mapper	UHGV-1964681_6	1235802.C823_05611	165.0	0	Ami_2	N/A
Pfam	UHGV-1964681_6	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1964681_6	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1964681_6	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_7	phrog_13256	73.2	2e-21	N/A	unknown function
eggNOG-mapper	UHGV-1964681_7	1226322.HMPREF1545_00166	68.2	0.0000000000000367	N/A	N/A
PHROG	UHGV-1964681_8	phrog_355	62.8	5.3e-18	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1964681_8	UniRef90_A0A3E2TS79	130.0	2.11e-37	N/A	N/A
eggNOG-mapper	UHGV-1964681_8	1256908.HMPREF0373_00479	119.0	5.77e-34	N/A	N/A
structural_annotation	UHGV-1964681_8	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_10	phrog_937	60.5	3e-17	hemolysin	other
eggNOG-mapper	UHGV-1964681_10	1519439.JPJG01000023_gene533	75.5	1.5e-16	N/A	N/A
KOfam	UHGV-1964681_11	K18454	44.6	0.000000000002	deaA; chitin disaccharide deacetylase [EC:3.5.1.105]	N/A
PHROG	UHGV-1964681_11	phrog_27545	69.7	4.6e-20	N/A	unknown function
UniRef90	UHGV-1964681_11	UniRef90_A0A1C5VT90	152.0	4.2039e-45	Chitinase A1	N/A
eggNOG-mapper	UHGV-1964681_11	1235796.C815_00903	138.0	1.86e-39	N/A	N/A
Pfam	UHGV-1964681_11	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-1964681_11	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_13	phrog_29409	46.9	0.00000000000041	N/A	unknown function
UniRef90	UHGV-1964681_13	UniRef90_UPI001A9AA1DC	69.7	0.00000000000143	isoaspartyl peptidase	N/A
PHROG	UHGV-1964681_14	phrog_37900	289.2	0	N/A	unknown function
UniRef90	UHGV-1964681_14	UniRef90_UPI001C3EA4DF	336.0	0	N/A	N/A
eggNOG-mapper	UHGV-1964681_14	552398.HMPREF0866_03098	244.0	0	N/A	N/A
Pfam	UHGV-1964681_14	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1964681_14	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1964681_14	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_16	phrog_13589	151.2	5.60519e-45	N/A	unknown function
eggNOG-mapper	UHGV-1964681_16	411460.RUMTOR_01324	196.0	0	N/A	N/A
PHROG	UHGV-1964681_17	phrog_31538	48.4	0.00000000000022	N/A	unknown function
eggNOG-mapper	UHGV-1964681_17	428125.CLOLEP_01433	57.0	0.00000000156	N/A	N/A
structural_annotation	UHGV-1964681_18	PF10651,NF038186	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1964681_19	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_20	phrog_32308	68.8	1.4e-20	N/A	unknown function
eggNOG-mapper	UHGV-1964681_20	1235797.C816_04180	115.0	1.12e-26	N/A	N/A
structural_annotation	UHGV-1964681_20	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_21	phrog_1194	93.8	1.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-1964681_21	1219626.HMPREF1639_07230	63.2	0.0000000000332	N/A	N/A
Pfam	UHGV-1964681_21	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1964681_21	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_22	phrog_1535	118.5	1.6e-35	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1964681_22	693746.OBV_18190	191.0	0	domain protein	N/A
COG	UHGV-1964681_22	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1964681_22	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_23	phrog_706	122.4	3.1e-36	N/A	unknown function
UniRef90	UHGV-1964681_23	UniRef90_UPI000682A80B	214.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1964681_23	693746.OBV_18170	202.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1964681_23	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1964681_23	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_24	phrog_11299	83.3	3.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-1964681_24	693746.OBV_18160	153.0	0	N/A	N/A
structural_annotation	UHGV-1964681_24	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_25	phrog_3099	84.5	1.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-1964681_25	693746.OBV_18150	257.0	0	N/A	N/A
structural_annotation	UHGV-1964681_25	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_26	phrog_3266	58.7	9.3e-17	tail completion	connector
eggNOG-mapper	UHGV-1964681_26	693746.OBV_18140	216.0	0	N/A	N/A
structural_annotation	UHGV-1964681_26	PF08873	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_27	phrog_556	69.0	6e-20	minor head protein	head and packaging
UniRef90	UHGV-1964681_27	UniRef90_A0A4R1QRE8	111.0	1.6e-28	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1964681_27	33035.JPJF01000106_gene3128	77.0	9.49e-16	N/A	N/A
Pfam	UHGV-1964681_27	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1964681_27	PF11114	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1964681_28	PF20536,MF_01370,TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_29	phrog_541	63.9	2.3e-18	head-tail adaptor	connector
eggNOG-mapper	UHGV-1964681_29	693746.OBV_18110	106.0	2.77e-28	N/A	N/A
PHROG	UHGV-1964681_30	phrog_212	261.7	0	major head protein	head and packaging
UniRef90	UHGV-1964681_30	UniRef90_A0A354MR33	540.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1964681_30	1232449.BAHV02000010_gene2714	344.0	0	N/A	N/A
structural_annotation	UHGV-1964681_30	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_31	phrog_194	88.5	9.9e-26	head scaffolding protein	head and packaging
UniRef90	UHGV-1964681_31	UniRef90_UPI00164D9F94	238.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1964681_31	693746.OBV_18080	174.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1964681_31	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1964681_31	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_32	phrog_581	231.6	0	minor head protein	head and packaging
UniRef90	UHGV-1964681_32	UniRef90_UPI0006814CA4	495.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1964681_32	693746.OBV_18050	518.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1964681_32	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1964681_32	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1964681_32	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_33	phrog_533	213.0	0	portal protein	head and packaging
UniRef90	UHGV-1964681_33	UniRef90_UPI000680A1DB	531.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1964681_33	693746.OBV_18040	388.0	0	N/A	N/A
Pfam	UHGV-1964681_33	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1964681_33	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1964681_35	K06909	130.1	2.1e-38	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1964681_35	phrog_10250	160.7	0	N/A	unknown function
UniRef90	UHGV-1964681_35	UniRef90_A0A1C6J947	632.0	0	Bacteriophage terminase large (ATPase) subunit and inactivated derivatives	N/A
eggNOG-mapper	UHGV-1964681_35	1226322.HMPREF1545_00043	612.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1964681_35	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1964681_35	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1964681_35	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1964681_35	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1964681_36	UniRef90_A0A2Z4Q9Z4	155.0	0	Nascent polypeptide-associated complex domain protein	N/A
eggNOG-mapper	UHGV-1964681_36	1226322.HMPREF1545_00042	151.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-1964681_36	PF13542	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_37	phrog_36	78.7	8.6e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-1964681_37	UniRef90_A0A858BU04	89.0	5.97e-20	N/A	N/A
eggNOG-mapper	UHGV-1964681_37	1123075.AUDP01000020_gene1515	57.8	0.0000000127	sigma factor activity	N/A
COG	UHGV-1964681_37	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1964681_37	PF07374,MF_00245,TIGR02980,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_39	phrog_801	80.1	3.2e-23	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-1964681_39	UniRef90_A0A2K9P078	108.0	7.18e-29	N/A	N/A
Pfam	UHGV-1964681_39	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-1964681_39	PF18909	N/A	N/A	N/A	N/A
UniRef90	UHGV-1964681_43	UniRef90_UPI0019D1E2CF	271.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-1964681_43	1410632.JHWW01000006_gene695	213.0	0	N/A	N/A
Pfam	UHGV-1964681_43	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
PHROG	UHGV-1964681_46	phrog_31029	65.3	7.3e-19	N/A	unknown function
PHROG	UHGV-1964681_49	phrog_38832	91.5	8e-27	N/A	unknown function
eggNOG-mapper	UHGV-1964681_49	445972.ANACOL_00165	72.0	0.000000000000389	N/A	N/A
structural_annotation	UHGV-1964681_49	PF11717,TIGR02450	N/A	N/A	N/A	N/A
Pfam	UHGV-1964681_50	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1964681_50	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_51	phrog_9298	66.2	3.8e-19	radical SAM domain protein	other
UniRef90	UHGV-1964681_51	UniRef90_D4C6F1	311.0	0	Elp3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1964681_51	742738.HMPREF9460_03770	295.0	0	radical SAM domain protein	N/A
COG	UHGV-1964681_51	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-1964681_51	PF04055,MF_01864,TIGR04072,COG0621	N/A	N/A	N/A	N/A
KOfam	UHGV-1964681_53	K00571	124.9	7.9e-37	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1964681_53	phrog_67	100.3	9.2e-30	DNA methyltransferase	other
UniRef90	UHGV-1964681_53	UniRef90_A0A2U1CFM2	425.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1964681_53	658655.HMPREF0988_00878	372.0	0	DNA methylase	N/A
PADLOC	UHGV-1964681_53	MTase_II_00157	91.5	1.5e-26	Type II methyltransferase	RM
Pfam	UHGV-1964681_53	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1964681_53	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1964681_53	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-1964681_54	K01160	45.1	0.0000000000026	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
UniRef90	UHGV-1964681_54	UniRef90_A0A1V5ZUM0	111.0	4.61e-29	Endodeoxyribonuclease RusA	N/A
structural_annotation	UHGV-1964681_54	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1964681_57	1444310.JANV01000162_gene1216	135.0	1.31e-35	N/A	N/A
PHROG	UHGV-1964681_58	phrog_16304	103.0	3.7e-30	N/A	unknown function
UniRef90	UHGV-1964681_58	UniRef90_UPI001C10203E	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-1964681_58	1007096.BAGW01000033_gene1617	95.9	1.04e-21	ROK family	N/A
Pfam	UHGV-1964681_58	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1964681_58	COG3355	N/A	N/A	Predicted transcriptional regulator	N/A
structural_annotation	UHGV-1964681_58	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1964681_59	K03111	131.0	1.4e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1964681_59	phrog_44	139.8	1.6e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1964681_59	UniRef90_R6LLA3	190.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1964681_59	693746.OBV_19910	173.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1964681_59	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1964681_59	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1964681_59	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1964681_59	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1964681_59	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-1964681_61	UniRef90_A0A3D1LDS4	132.0	2.62e-38	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-1964681_61	445972.ANACOL_01826	92.4	1.56e-23	HNH nucleases	N/A
Pfam	UHGV-1964681_61	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-1964681_62	phrog_72	58.7	1.1e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1964681_62	UniRef90_UPI001F3F3E5C	162.0	0	recombination protein NinB	N/A
eggNOG-mapper	UHGV-1964681_62	445972.ANACOL_01825	130.0	1.52e-35	N/A	N/A
structural_annotation	UHGV-1964681_62	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_63	phrog_14970	200.6	0	N/A	unknown function
UniRef90	UHGV-1964681_63	UniRef90_A0A3P6JH63	152.0	2.00946e-42	Essential recombination function protein	N/A
eggNOG-mapper	UHGV-1964681_63	397291.C804_03856	156.0	2.10195e-44	double-strand break repair protein	N/A
Pfam	UHGV-1964681_63	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-1964681_63	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1964681_63	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1964681_66	phrog_4973	64.9	1.1e-18	N/A	unknown function
UniRef90	UHGV-1964681_66	UniRef90_A0A3D3Y5F2	154.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1964681_66	584708.Apau_1668	58.5	0.000000000341	Helix-turn-helix domain	N/A
Pfam	UHGV-1964681_66	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1964681_66	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A