UHGV-1973393 (vOTU-123217)

Viral Genome: UHGV-1973393

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1973393
vOTU ID	vOTU-123217
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300014941\|Ga0134385_100382
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	52.31 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	5
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9688
Virus hallmark genes (geNomad)	3
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Uncertain - viral or bacterial
viralVerify score	0.05
Jumbo phage	No

Genome content
Genome length (bp)	20,942
GC content	59.46%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	28
CDS density	93%
Average CDS length (bps)	697.18
Total tRNA genes	3
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 52.31)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1973393_1	phrog_1236	45.3	0.00000000000015	head protein	head and packaging
PHROG	UHGV-1973393_2	phrog_17977	71.7	7.4e-21	N/A	unknown function
UniRef90	UHGV-1973393_2	UniRef90_UPI00141211AB	97.1	9.51e-24	head-tail adaptor protein	N/A
structural_annotation	UHGV-1973393_2	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1973393_3	UniRef90_A0A415JI88	109.0	1.79e-28	N/A	N/A
structural_annotation	UHGV-1973393_3	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1973393_4	phrog_885	100.6	1.2e-29	major tail protein	tail
UniRef90	UHGV-1973393_4	UniRef90_A0A843J9F0	154.0	5.74532e-43	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1973393_4	1111121.HMPREF1247_0789	173.0	0	N/A	N/A
structural_annotation	UHGV-1973393_4	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1973393_5	UniRef90_A0A285PXU7	78.6	4.28e-16	Consensus disorder prediction	N/A
PHROG	UHGV-1973393_7	phrog_6900	254.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1973393_7	1499683.CCFF01000017_gene2565	286.0	0	tape measure	N/A
COG	UHGV-1973393_7	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1973393_7	MF_04138,COG5281	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1973393_8	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1973393_9	phrog_13879	501.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1973393_9	1235797.C816_02659	735.0	0	N/A	N/A
structural_annotation	UHGV-1973393_9	PF14594,PF06588,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1973393_10	PF00354	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1973393_11	552398.HMPREF0866_02181	57.4	0.00000024	N/A	N/A
UniRef90	UHGV-1973393_13	UniRef90_A0A1Y4UUC3	53.1	0.0000000227	XkdX family protein	N/A
structural_annotation	UHGV-1973393_13	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-1973393_14	phrog_37604	186.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1973393_14	1232443.BAIA02000078_gene10	131.0	6.17e-37	N/A	N/A
PHROG	UHGV-1973393_15	phrog_13256	73.5	1.8e-21	N/A	unknown function
eggNOG-mapper	UHGV-1973393_15	1226322.HMPREF1545_00132	83.6	1.89e-20	N/A	N/A
KOfam	UHGV-1973393_17	K01448	123.1	3e-36	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1973393_17	phrog_435	125.0	6.3e-37	endolysin	lysis
UniRef90	UHGV-1973393_17	UniRef90_UPI001C107E48	99.8	4.55e-19	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1973393_17	1410668.JNKC01000001_gene1675	161.0	2.49431e-43	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1973393_17	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1973393_17	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-1973393_17	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1973393_17	PF01520,PF09992,PF01471,MF_00562,TIGR02883,COG0860,COG4632,COG3409	N/A	N/A	N/A	N/A
UniRef90	UHGV-1973393_18	UniRef90_A0A1C6JAI6	75.9	2.48e-16	RNA polymerase sigma factor, sigma-70 family	N/A
structural_annotation	UHGV-1973393_18	PF16509,MF_00674,NF008895,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1973393_20	phrog_3754	101.2	9.6e-30	N/A	unknown function
eggNOG-mapper	UHGV-1973393_20	476272.RUMHYD_01764	181.0	0	N/A	N/A
PHROG	UHGV-1973393_21	phrog_21718	119.9	1.6e-35	N/A	unknown function
eggNOG-mapper	UHGV-1973393_21	397290.C810_05210	75.5	0.00000000000000515	N/A	N/A
PHROG	UHGV-1973393_22	phrog_22984	107.8	5.1e-32	N/A	unknown function
PHROG	UHGV-1973393_23	phrog_16490	213.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1973393_23	658655.HMPREF0988_00917	184.0	0	N/A	N/A
PHROG	UHGV-1973393_24	phrog_20016	171.2	0	N/A	unknown function
UniRef90	UHGV-1973393_24	UniRef90_A0A285PT46	158.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1973393_24	1226322.HMPREF1545_00077	144.0	1.26958e-42	N/A	N/A
structural_annotation	UHGV-1973393_24	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1973393_26	1226322.HMPREF1545_00079	134.0	5.01e-39	N/A	N/A
UniRef90	UHGV-1973393_27	UniRef90_A0A1Y4L993	351.0	0	Hydrolase	N/A
eggNOG-mapper	UHGV-1973393_27	552398.HMPREF0866_03060	399.0	0	GMP reductase activity	N/A
COG	UHGV-1973393_27	COG0516	N/A	N/A	IMP dehydrogenase/GMP reductase	N/A
KOfam	UHGV-1973393_28	K01952	786.0	0	PFAS, purL; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]	N/A
UniRef90	UHGV-1973393_28	UniRef90_A0A1C6EJ68	2336.0	0	Phosphoribosylformylglycinamidine synthase 2	N/A
eggNOG-mapper	UHGV-1973393_28	552398.HMPREF0866_03061	2014.0	0	phosphoribosylformylglycinamidine synthase	N/A
Pfam	UHGV-1973393_28	PF18072	N/A	N/A	Formylglycinamide ribonucleotide amidotransferase linker domain	FGAR-AT_linker
Pfam	UHGV-1973393_28	PF02769	N/A	N/A	AIR synthase related protein, C-terminal domain	AIRS_C
Pfam	UHGV-1973393_28	PF00586	N/A	N/A	AIR synthase related protein, N-terminal domain	AIRS
Pfam	UHGV-1973393_28	PF13507	N/A	N/A	CobB/CobQ-like glutamine amidotransferase domain	GATase_5
NCBIFam	UHGV-1973393_28	TIGR01857.1	N/A	N/A	phosphoribosylformylglycinamidine synthase	N/A
COG	UHGV-1973393_28	COG0046	N/A	N/A	Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain	N/A