Overview | |
---|---|
UHGV ID | UHGV-1977808 |
vOTU ID | vOTU-000018 |
Representative Genome? | No |
Source | IMGVR4 |
Original genome ID | 3300014571|Ga0134369_100100 |
Associated BioSample | SAMN03922456 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 71.63 (Medium-quality) |
Trimmed provirus | No |
CheckV viral markers | 9 |
CheckV host markers | 2 |
Recoded stop codon | Yes |
Viral Content | |
---|---|
geNomad score | 0.9748 |
Virus hallmark genes (geNomad) | 5 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Uncertain - viral or bacterial |
viralVerify score | 3.44 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 125,462 |
GC content | 30.98% |
Genetic code | The Mold, Protozoan, and Coelenterate Mitochondrial Code and the Mycoplasma/Spiroplasma Code (4) |
CDS genes | 123 |
CDS density | 85% |
Average CDS length (bps) | 867.51 |
Total tRNA genes | 22 |
Suppressor tRNA genes | 0 |