Overview | |
---|---|
UHGV ID | UHGV-1986903 |
vOTU ID | vOTU-016093 |
Representative Genome? | Yes |
Source | IMGVR4 |
Original genome ID | 3300014963|Ga0134523_1000438|provirus_251_32625 |
Associated BioSample | SAMN04158624 |
Viral genome confidence | Uncertain |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 39.03 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 6 |
CheckV host markers | 2 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9355 |
Virus hallmark genes (geNomad) | 6 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Uncertain - viral or bacterial |
viralVerify score | -3.29 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 17,298 |
GC content | 65.76% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 21 |
CDS density | 92% |
Average CDS length (bps) | 754.86 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |