UHGV-2002128 (vOTU-022200)

Viral Genome: UHGV-2002128

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2002128
vOTU ID	vOTU-022200
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300023499\|Ga0257052_100113\|provirus_193_22537
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	55.91 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9742
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	33.24
Jumbo phage	No

Genome content
Genome length (bp)	22,345
GC content	48.54%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	32
CDS density	96%
Average CDS length (bps)	669.66
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 55.91)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2002128_1	K07474	46.4	0.0000000000011	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-2002128_1	phrog_51	51.7	0.0000000000000097	terminase small subunit	head and packaging
UniRef90	UHGV-2002128_1	UniRef90_UPI000C7A7EA3	77.4	0.00000000000000132	terminase small subunit	N/A
eggNOG-mapper	UHGV-2002128_1	1158607.UAU_05157	64.3	0.0000000000251	Terminase small subunit	N/A
Pfam	UHGV-2002128_1	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
KOfam	UHGV-2002128_2	K06909	119.5	3.4e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2002128_2	phrog_10250	150.5	5.60519e-45	N/A	unknown function
UniRef90	UHGV-2002128_2	UniRef90_UPI000B8B31AD	482.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2002128_2	1226322.HMPREF1545_00043	473.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-2002128_2	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-2002128_2	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2002128_2	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2002128_2	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2002128_4	phrog_533	214.7	0	portal protein	head and packaging
UniRef90	UHGV-2002128_4	UniRef90_UPI000680A1DB	476.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-2002128_4	693746.OBV_18040	381.0	0	N/A	N/A
structural_annotation	UHGV-2002128_4	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-2002128_5	phrog_581	226.6	0	minor head protein	head and packaging
UniRef90	UHGV-2002128_5	UniRef90_UPI0006814CA4	604.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-2002128_5	693746.OBV_18050	456.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-2002128_5	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2002128_5	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2002128_5	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-2002128_7	phrog_194	107.2	1.9e-31	head scaffolding protein	head and packaging
UniRef90	UHGV-2002128_7	UniRef90_A0A2N0ULW9	164.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-2002128_7	742765.HMPREF9457_02126	145.0	1.96995e-41	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-2002128_7	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-2002128_7	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2002128_8	phrog_422	243.6	0	major head protein	head and packaging
UniRef90	UHGV-2002128_8	UniRef90_W0U896	369.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-2002128_8	693746.OBV_18090	402.0	0	N/A	N/A
structural_annotation	UHGV-2002128_8	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
Pfam	UHGV-2002128_9	PF13912	N/A	N/A	C2H2-type zinc finger	zf-C2H2_6
PHROG	UHGV-2002128_10	phrog_541	92.2	4.5e-27	head-tail adaptor	connector
eggNOG-mapper	UHGV-2002128_10	1304866.K413DRAFT_3039	85.1	1.04e-19	N/A	N/A
PHROG	UHGV-2002128_11	phrog_3366	43.1	0.00000000000039	N/A	unknown function
eggNOG-mapper	UHGV-2002128_11	1449050.JNLE01000003_gene3887	77.4	9.64e-17	N/A	N/A
Pfam	UHGV-2002128_11	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-2002128_11	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-2002128_12	phrog_556	95.4	3.8e-28	minor head protein	head and packaging
UniRef90	UHGV-2002128_12	UniRef90_UPI001B3C5A2B	144.0	5.05995e-41	minor capsid protein	N/A
eggNOG-mapper	UHGV-2002128_12	1449050.JNLE01000003_gene3886	130.0	1.26e-36	N/A	N/A
Pfam	UHGV-2002128_12	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-2002128_12	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-2002128_13	phrog_3266	97.9	7.6e-29	tail completion	connector
eggNOG-mapper	UHGV-2002128_13	1304866.K413DRAFT_3042	132.0	1.62e-37	N/A	N/A
structural_annotation	UHGV-2002128_13	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-2002128_14	phrog_3099	138.1	4.90006e-41	N/A	unknown function
eggNOG-mapper	UHGV-2002128_14	1304866.K413DRAFT_3043	155.0	0	N/A	N/A
structural_annotation	UHGV-2002128_14	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2002128_15	phrog_11299	111.9	4.5e-33	N/A	unknown function
eggNOG-mapper	UHGV-2002128_15	1298920.KI911353_gene2067	75.9	0.00000000000000282	N/A	N/A
structural_annotation	UHGV-2002128_15	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-2002128_16	phrog_706	145.9	2.10195e-43	N/A	unknown function
UniRef90	UHGV-2002128_16	UniRef90_UPI00051C36A4	206.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2002128_16	1449050.JNLE01000003_gene3882	205.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2002128_16	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2002128_16	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2002128_17	phrog_1535	125.0	0	tail length tape measure protein	tail
UniRef90	UHGV-2002128_17	UniRef90_A0A810PX76	120.0	1.74e-24	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-2002128_17	1232443.BAIA02000078_gene18	117.0	4.85e-24	phage tail tape measure protein	N/A
COG	UHGV-2002128_17	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2002128_17	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-2002128_18	phrog_1194	66.6	3.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-2002128_18	1211844.CBLM010000023_gene979	50.1	0.0000053	N/A	N/A
Pfam	UHGV-2002128_18	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-2002128_18	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2002128_19	phrog_6616	118.2	4.7e-36	tail protein	tail
eggNOG-mapper	UHGV-2002128_19	469596.HMPREF9488_01318	167.0	3.08e-40	N/A	N/A
structural_annotation	UHGV-2002128_19	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2002128_21	PF10651,NF009453	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2002128_22	PF02973	N/A	N/A	N/A	N/A
PHROG	UHGV-2002128_24	phrog_27545	95.1	7.4e-28	N/A	unknown function
UniRef90	UHGV-2002128_24	UniRef90_A0A2V2GQB6	115.0	2.99e-30	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-2002128_24	411471.SUBVAR_06976	108.0	1.91e-28	N/A	N/A
Pfam	UHGV-2002128_24	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
PHROG	UHGV-2002128_25	phrog_1863	64.2	1.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-2002128_25	1291050.JAGE01000001_gene2942	87.4	3.55e-21	N/A	N/A
PHROG	UHGV-2002128_26	phrog_608	65.7	6.4e-19	holin	lysis
UniRef90	UHGV-2002128_26	UniRef90_R6I9L8	112.0	1.21e-29	Putative phage holin	N/A
Pfam	UHGV-2002128_26	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-2002128_26	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-2002128_27	phrog_15956	42.9	0.0000000000021	tail assembly protein	tail
UniRef90	UHGV-2002128_27	UniRef90_A0A644YJG6	211.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-2002128_27	742740.HMPREF9474_01683	132.0	1.54e-32	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-2002128_27	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-2002128_27	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-2002128_27	PF11910,MF_01354,NF033742	N/A	N/A	N/A	N/A
PHROG	UHGV-2002128_28	phrog_355	68.9	6.8e-20	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2002128_28	UniRef90_A0A396KGT7	184.0	0	N/A	N/A
eggNOG-mapper	UHGV-2002128_28	97138.C820_00250	129.0	1.09e-37	N/A	N/A
Pfam	UHGV-2002128_28	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-2002128_28	PF14359,COG3613	N/A	N/A	N/A	N/A
KOfam	UHGV-2002128_30	K03778	482.8	0	ldhA; D-lactate dehydrogenase [EC:1.1.1.28]	N/A
PHROG	UHGV-2002128_30	phrog_26092	121.0	9.8e-36	N/A	unknown function
UniRef90	UHGV-2002128_30	UniRef90_R6I8H0	650.0	0	4-phosphoerythronate dehydrogenase	N/A
eggNOG-mapper	UHGV-2002128_30	411463.EUBVEN_01915	473.0	0	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family	N/A
Pfam	UHGV-2002128_30	PF02826	N/A	N/A	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain	2-Hacid_dh_C
COG	UHGV-2002128_30	COG1052	N/A	N/A	Lactate dehydrogenase or related 2-hydroxyacid dehydrogenase	N/A