UHGV-2010251 (vOTU-040532)

Viral Genome: UHGV-2010251

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2010251
vOTU ID	vOTU-040532
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300023545\|Ga0257041_100045\|provirus_2_29988
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	70.44 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	6
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9684
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	21.3
Jumbo phage	No

Genome content
Genome length (bp)	29,987
GC content	50.42%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	45
CDS density	90%
Average CDS length (bps)	598.87
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 70.44)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2010251_1	phrog_18723	51.1	2.6e-21	N/A	unknown function
eggNOG-mapper	UHGV-2010251_2	665956.HMPREF1032_03261	63.5	0.00000000933	N/A	N/A
PHROG	UHGV-2010251_3	phrog_3287	147.7	7.56701e-44	virion structural protein	head and packaging
eggNOG-mapper	UHGV-2010251_3	693746.OBV_23870	578.0	0	N/A	N/A
structural_annotation	UHGV-2010251_3	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-2010251_4	phrog_13046	42.9	0.00000000000016	N/A	unknown function
eggNOG-mapper	UHGV-2010251_4	693746.OBV_23880	86.7	4.17e-18	N/A	N/A
structural_annotation	UHGV-2010251_4	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-2010251_5	phrog_371	140.1	1.10002e-41	major head protein	head and packaging
UniRef90	UHGV-2010251_5	UniRef90_R5AAY6	694.0	0	Mu-like_gpT domain-containing protein	N/A
eggNOG-mapper	UHGV-2010251_5	1226322.HMPREF1545_03848	290.0	0	N/A	N/A
Pfam	UHGV-2010251_5	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
structural_annotation	UHGV-2010251_5	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2010251_6	phrog_24113	52.7	0.0000000000000052	N/A	unknown function
structural_annotation	UHGV-2010251_6	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-2010251_7	phrog_35275	43.4	0.0000000000048	N/A	unknown function
eggNOG-mapper	UHGV-2010251_7	693746.OBV_23910	78.6	0.0000000000000716	N/A	N/A
PHROG	UHGV-2010251_10	phrog_156	273.8	0	portal protein	head and packaging
eggNOG-mapper	UHGV-2010251_10	693746.OBV_23930	478.0	0	N/A	N/A
structural_annotation	UHGV-2010251_10	PF16510,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-2010251_11	K04763	108.7	7.3e-32	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-2010251_11	phrog_216	154.7	0	integrase	integration and excision
UniRef90	UHGV-2010251_11	UniRef90_R5AM78	376.0	0	Integrase family protein	N/A
eggNOG-mapper	UHGV-2010251_11	97138.C820_00621	198.0	0	integrase family	N/A
Pfam	UHGV-2010251_11	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2010251_11	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2010251_11	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-2010251_12	phrog_24361	103.5	1.5e-30	terminase	head and packaging
UniRef90	UHGV-2010251_12	UniRef90_R5AHR8	1120.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-2010251_12	693746.OBV_23980	534.0	0	phage Terminase large subunit	N/A
COG	UHGV-2010251_12	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-2010251_12	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-2010251_13	phrog_309	69.4	4.4e-20	terminase small subunit	head and packaging
UniRef90	UHGV-2010251_13	UniRef90_A0A316MAA8	86.3	6.73e-18	Xaa-His dipeptidase	N/A
eggNOG-mapper	UHGV-2010251_13	97138.C820_00620	121.0	3.31e-32	transposase activity	N/A
COG	UHGV-2010251_13	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-2010251_13	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-2010251_14	K06218	77.9	2.8e-22	relE, stbE; mRNA interferase RelE/StbE	N/A
PHROG	UHGV-2010251_14	phrog_1213	78.1	1.1e-22	RelE-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2010251_14	UniRef90_R5AEV9	163.0	0	Cytotoxic translational repressor of toxin-antitoxin stability system	N/A
eggNOG-mapper	UHGV-2010251_14	97139.C824_00468	128.0	5.69e-38	ParE toxin of type II toxin-antitoxin system, parDE	N/A
Pfam	UHGV-2010251_14	PF05016	N/A	N/A	ParE toxin of type II toxin-antitoxin system, parDE	ParE_toxin
COG	UHGV-2010251_14	COG2026	N/A	N/A	mRNA-degrading endonuclease RelE, toxin component of the RelBE toxin-antitoxin system	N/A
structural_annotation	UHGV-2010251_14	PF05016,TIGR00053,COG2026	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2010251_15	1235792.C808_02931	105.0	1.79e-28	N/A	N/A
KOfam	UHGV-2010251_16	K07727	43.2	0.0000000000095	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-2010251_16	UniRef90_R5AM83	141.0	1.02015e-42	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2010251_16	445972.ANACOL_01859	93.2	2.33e-24	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-2010251_16	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-2010251_16	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-2010251_16	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2010251_18	PF07374,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-2010251_20	K02314	376.6	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-2010251_20	phrog_19	279.6	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2010251_20	UniRef90_R5AEW4	859.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-2010251_20	97138.C820_00625	278.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-2010251_20	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-2010251_20	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-2010251_20	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-2010251_20	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-2010251_21	phrog_15768	88.2	1e-25	N/A	unknown function
UniRef90	UHGV-2010251_21	UniRef90_R5AB02	206.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-2010251_21	1231057.AMGD01000018_gene3636	102.0	5.86e-23	Conserved phage C-terminus (Phg_2220_C)	N/A
COG	UHGV-2010251_21	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-2010251_21	PF09681,TIGR01714,COG1846	N/A	N/A	N/A	N/A
UniRef90	UHGV-2010251_22	UniRef90_A0A401LG95	294.0	0	MazG domain-containing protein	N/A
Pfam	UHGV-2010251_22	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
eggNOG-mapper	UHGV-2010251_24	760568.Desku_0919	90.9	7.84e-20	N/A	N/A
structural_annotation	UHGV-2010251_24	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
KOfam	UHGV-2010251_29	K22300	52.0	4.1e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2010251_29	phrog_8	50.4	0.0000000000000015	transcriptional regulator	transcription regulation
UniRef90	UHGV-2010251_29	UniRef90_A0A401LG78	251.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2010251_29	1378168.N510_00479	53.9	0.000000173	sequence-specific DNA binding	N/A
Pfam	UHGV-2010251_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2010251_29	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2010251_29	PF12844,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-2010251_32	phrog_9467	210.7	0	N/A	unknown function
UniRef90	UHGV-2010251_32	UniRef90_UPI001C3853B3	154.0	1.68156e-44	Gp49 family protein	N/A
eggNOG-mapper	UHGV-2010251_32	1226322.HMPREF1545_00781	204.0	0	N/A	N/A
Pfam	UHGV-2010251_32	PF13876	N/A	N/A	N/A	Phage_gp49_66
dbAPIS	UHGV-2010251_32	APIS043	N/A	N/A	N/A	N/A
PHROG	UHGV-2010251_33	phrog_774	55.8	5.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-2010251_33	397290.C810_05225	68.9	0.000000000000728	N/A	N/A
KOfam	UHGV-2010251_34	K03111	130.3	2.3e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-2010251_34	phrog_44	134.3	8.1e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2010251_34	UniRef90_R5AMA1	258.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-2010251_34	97138.C820_02339	197.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-2010251_34	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-2010251_34	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-2010251_34	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-2010251_34	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2010251_34	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-2010251_35	phrog_1029	279.8	0	N/A	unknown function
eggNOG-mapper	UHGV-2010251_35	1510440.A0A068EPX8_9CAUD	209.0	0	N/A	N/A
structural_annotation	UHGV-2010251_35	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-2010251_36	phrog_997	106.6	1.9e-31	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2010251_36	UniRef90_A0A350U067	246.0	0	Replication terminator protein	N/A
eggNOG-mapper	UHGV-2010251_36	1443125.Z962_p0033	77.0	2.55e-16	replication terminator protein, phage associated	N/A
KOfam	UHGV-2010251_43	K18830	45.9	0.00000000000096	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-2010251_43	phrog_4	42.3	0.000000000015	transcriptional repressor	transcription regulation
UniRef90	UHGV-2010251_43	UniRef90_R5AEY7	244.0	0	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-2010251_43	1235797.C816_03553	109.0	1.95e-28	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-2010251_43	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-2010251_43	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2010251_43	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
COG	UHGV-2010251_44	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
KOfam	UHGV-2010251_45	K06400	283.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-2010251_45	phrog_95	298.3	0	integrase	integration and excision
UniRef90	UHGV-2010251_45	UniRef90_R5AMB7	1032.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-2010251_45	697281.Mahau_2563	491.0	0	resolvase	N/A
Pfam	UHGV-2010251_45	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-2010251_45	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-2010251_45	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-2010251_45	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A