UHGV-2027782 (vOTU-070329)

Viral Genome: UHGV-2027782

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2027782
vOTU ID	vOTU-070329
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029119\|Ga0168816_100592
Associated BioSample	SAMEA2737797
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	94.22 (High-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9801
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	42.94
Jumbo phage	No

Genome content
Genome length (bp)	39,798
GC content	53.10%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	73
CDS density	92%
Average CDS length (bps)	503.92
Total tRNA genes	5
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 94.22)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2027782_2	K06909	147.7	9.3887e-44	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2027782_2	phrog_10250	180.1	0	N/A	unknown function
UniRef90	UHGV-2027782_2	UniRef90_A0A844D8I4	796.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2027782_2	903814.ELI_3215	496.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-2027782_2	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-2027782_2	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-2027782_2	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2027782_2	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2027782_2	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2027782_3	phrog_64	125.8	1.3e-37	portal protein	head and packaging
UniRef90	UHGV-2027782_3	UniRef90_A0A6N7TNT3	652.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-2027782_3	673376.F2VHW1_9CAUD	166.0	2.66247e-43	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-2027782_3	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-2027782_3	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-2027782_5	phrog_2468	86.0	4.2e-25	head morphogenesis	head and packaging
UniRef90	UHGV-2027782_5	UniRef90_A0A6N7TLR7	587.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-2027782_5	1504822.CCNO01000013_gene286	114.0	8.25e-25	cell adhesion	N/A
Pfam	UHGV-2027782_5	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-2027782_5	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2027782_5	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-2027782_8	phrog_8680	199.6	0	N/A	unknown function
UniRef90	UHGV-2027782_8	UniRef90_A0A844D688	391.0	0	N/A	N/A
eggNOG-mapper	UHGV-2027782_8	1423790.BN53_04265	172.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-2027782_8	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-2027782_8	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-2027782_8	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-2027782_10	phrog_5	49.9	0.000000000000082	tail completion or Neck1 protein	connector
UniRef90	UHGV-2027782_10	UniRef90_A0A6N7TNP6	295.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-2027782_10	1123309.AQYB01000018_gene814	96.3	1.76e-23	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-2027782_10	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-2027782_10	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-2027782_10	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-2027782_12	phrog_478	125.8	1.9e-37	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-2027782_12	UniRef90_A0A373Q857	164.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-2027782_12	1111121.HMPREF1247_0834	94.4	4.49e-23	N/A	N/A
structural_annotation	UHGV-2027782_13	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2027782_14	phrog_544	155.4	0	major head protein	head and packaging
UniRef90	UHGV-2027782_14	UniRef90_R0BKA1	458.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-2027782_14	476272.RUMHYD_01776	340.0	0	N/A	N/A
structural_annotation	UHGV-2027782_14	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-2027782_16	phrog_17977	43.7	0.0000000000042	N/A	unknown function
UniRef90	UHGV-2027782_16	UniRef90_A0A844DHJ8	127.0	2.12e-35	Phage head closure protein	N/A
structural_annotation	UHGV-2027782_16	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2027782_17	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-2027782_18	phrog_885	68.8	6.8e-20	major tail protein	tail
eggNOG-mapper	UHGV-2027782_18	1111121.HMPREF1247_0789	150.0	1.61149e-43	N/A	N/A
structural_annotation	UHGV-2027782_18	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2027782_21	phrog_1686	90.8	1.2e-26	tail length tape measure protein	tail
UniRef90	UHGV-2027782_21	UniRef90_A0A6N7TLD3	719.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-2027782_21	1492737.FEM08_12070	149.0	6.56e-35	tape measure	N/A
Pfam	UHGV-2027782_21	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-2027782_21	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-2027782_21	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-2027782_21	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-2027782_22	UniRef90_A0A415UCK7	90.5	3.5e-19	MtfA protein	N/A
eggNOG-mapper	UHGV-2027782_22	1111121.HMPREF1247_1241	97.8	1.06e-22	N/A	N/A
structural_annotation	UHGV-2027782_22	PF05709,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-2027782_23	phrog_3558	196.6	0	tail protein	tail
UniRef90	UHGV-2027782_23	UniRef90_UPI001C01D15B	171.0	1.98984e-42	phage tail protein	N/A
eggNOG-mapper	UHGV-2027782_23	411460.RUMTOR_00484	169.0	4.83028e-42	Prophage endopeptidase tail	N/A
Pfam	UHGV-2027782_23	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-2027782_23	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-2027782_23	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
KOfam	UHGV-2027782_25	K07273	152.7	2.8026e-45	acm; lysozyme	N/A
PHROG	UHGV-2027782_25	phrog_291	109.7	3e-32	endolysin	lysis
UniRef90	UHGV-2027782_25	UniRef90_A0A564U0D3	419.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-2027782_25	718252.FP2_04890	249.0	0	hydrolase, family 25	N/A
Pfam	UHGV-2027782_25	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-2027782_25	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-2027782_25	PF01183,TIGR04053,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-2027782_26	phrog_1863	81.1	7.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-2027782_26	718252.FP2_04900	139.0	2.47049e-42	N/A	N/A
PHROG	UHGV-2027782_27	phrog_15303	76.9	2.3e-22	N/A	unknown function
KOfam	UHGV-2027782_30	K23779	55.6	0.0000000000000013	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-2027782_30	phrog_1373	41.8	0.000000000012	transcriptional regulator	transcription regulation
Pfam	UHGV-2027782_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2027782_30	COG1309	N/A	N/A	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	N/A
structural_annotation	UHGV-2027782_30	PF01381,TIGR03070,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-2027782_32	phrog_3754	91.0	1.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-2027782_32	1485543.JMME01000025_gene2462	102.0	5.62e-27	N/A	N/A
PHROG	UHGV-2027782_33	phrog_21718	116.3	2.2e-34	N/A	unknown function
eggNOG-mapper	UHGV-2027782_33	397290.C810_05210	97.4	1.68e-23	N/A	N/A
PHROG	UHGV-2027782_34	phrog_22984	79.9	8.6e-24	N/A	unknown function
PHROG	UHGV-2027782_36	phrog_16490	95.4	4.4e-28	N/A	unknown function
eggNOG-mapper	UHGV-2027782_36	1408437.JNJN01000043_gene803	122.0	1.03e-31	N/A	N/A
PHROG	UHGV-2027782_37	phrog_20016	94.5	7.1e-28	N/A	unknown function
eggNOG-mapper	UHGV-2027782_37	1226322.HMPREF1545_00077	92.4	1.16e-22	N/A	N/A
eggNOG-mapper	UHGV-2027782_38	476272.RUMHYD_01772	50.4	0.00000944	N/A	N/A
structural_annotation	UHGV-2027782_38	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-2027782_40	K14059	139.0	5.60001e-41	int; integrase	N/A
PHROG	UHGV-2027782_40	phrog_1	164.7	0	integrase	integration and excision
UniRef90	UHGV-2027782_40	UniRef90_A0A6N7TNQ4	712.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-2027782_40	411471.SUBVAR_05137	263.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2027782_40	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2027782_40	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-2027782_40	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-2027782_41	UniRef90_A0A6N7TLT0	206.0	0	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-2027782_41	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-2027782_41	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2027782_44	321955.AAGP01000017_gene2211	64.7	0.000000000159	N/A	N/A
structural_annotation	UHGV-2027782_44	PF16900,NF040991	N/A	N/A	N/A	N/A
KOfam	UHGV-2027782_47	K22300	49.5	0.00000000000009	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2027782_47	phrog_2967	48.9	0.00000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-2027782_47	UniRef90_A0A844DFR0	169.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2027782_47	748224.HMPREF9436_01444	140.0	5.38995e-41	N/A	N/A
Pfam	UHGV-2027782_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2027782_47	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2027782_47	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2027782_49	PF16857,NF001981	N/A	N/A	N/A	N/A
KOfam	UHGV-2027782_52	K07741	141.2	1.6e-41	antB; anti-repressor protein	N/A
PHROG	UHGV-2027782_52	phrog_5817	104.8	1.1e-30	anti-repressor Ant	transcription regulation
UniRef90	UHGV-2027782_52	UniRef90_A0A6N7TLD1	225.0	0	Phage antirepressor Ant	N/A
eggNOG-mapper	UHGV-2027782_52	445971.ANASTE_00706	186.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-2027782_52	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-2027782_52	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-2027782_52	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-2027782_52	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-2027782_55	phrog_4433	135.4	0	N/A	unknown function
eggNOG-mapper	UHGV-2027782_55	394503.Ccel_3068	115.0	2.6e-29	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-2027782_55	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-2027782_56	PF10743,NF033787	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2027782_60	PF06718	N/A	N/A	N/A	N/A
PHROG	UHGV-2027782_62	phrog_561	111.9	5.9e-33	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2027782_62	UniRef90_UPI0011C8A287	148.0	7.11019e-42	recombinase RecT	N/A
eggNOG-mapper	UHGV-2027782_62	33035.JPJF01000071_gene4462	147.0	5.06009e-42	N/A	N/A
KOfam	UHGV-2027782_63	K03111	145.7	4.69435e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-2027782_63	phrog_44	145.0	3.19496e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2027782_63	UniRef90_D4K451	271.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-2027782_63	718252.FP2_06770	271.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-2027782_63	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-2027782_63	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-2027782_63	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-2027782_63	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2027782_63	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-2027782_64	K02086	68.3	1.2e-19	dnaD; DNA replication protein	N/A
PHROG	UHGV-2027782_64	phrog_186	77.8	1.7e-22	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2027782_64	UniRef90_A0A6N7TLH4	265.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-2027782_64	877411.JMMA01000002_gene2292	69.3	0.0000000000473	N/A	N/A
Pfam	UHGV-2027782_64	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-2027782_64	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-2027782_64	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
structural_annotation	UHGV-2027782_64	PF19808,PF07261,TIGR01446,COG3935	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2027782_65	PF11417	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2027782_66	PF01775,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
PHROG	UHGV-2027782_68	phrog_3136	111.8	2.9e-33	N/A	unknown function
UniRef90	UHGV-2027782_68	UniRef90_A0A6N7TMC2	167.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-2027782_68	1235793.C809_02645	56.2	0.000000758	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-2027782_68	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-2027782_68	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
KOfam	UHGV-2027782_69	K01160	55.3	0.0000000000000021	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-2027782_69	phrog_34	55.7	0.0000000000000012	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2027782_69	UniRef90_A0A6N7TND6	234.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-2027782_69	875454.BAEW01000002_gene491	147.0	4.62428e-44	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-2027782_69	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-2027782_69	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-2027782_69	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-2027782_70	K05925	67.9	1.4e-19	METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]	N/A
PHROG	UHGV-2027782_70	phrog_359	231.8	0	DNA methyltransferase	other
UniRef90	UHGV-2027782_70	UniRef90_A0A329TJ90	297.0	0	DNA methyltransferase	N/A
eggNOG-mapper	UHGV-2027782_70	1235798.C817_04106	208.0	0	Belongs to the MT-A70-like family	N/A
PADLOC	UHGV-2027782_70	MTase_II_00048	219.9	0	Type II methyltransferase	RM
Pfam	UHGV-2027782_70	PF05063	N/A	N/A	MT-A70	MT-A70
COG	UHGV-2027782_70	COG4725	N/A	N/A	N6-adenosine-specific RNA methylase IME4	N/A
structural_annotation	UHGV-2027782_70	PF05063,MF_01872,NF010253,COG4725	N/A	N/A	N/A	N/A
PHROG	UHGV-2027782_71	phrog_36	54.3	0.0000000000000025	transcriptional regulator	transcription regulation
structural_annotation	UHGV-2027782_71	PF07374,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-2027782_73	phrog_606	89.4	4.2e-26	terminase small subunit	head and packaging
UniRef90	UHGV-2027782_73	UniRef90_UPI001C02EFD1	294.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-2027782_73	397290.C810_05185	140.0	2.27001e-40	DNA-packaging protein gp3	N/A
Pfam	UHGV-2027782_73	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-2027782_73	PF16677	N/A	N/A	N/A	N/A