UHGV-2029179 (vOTU-021149)

Viral Genome: UHGV-2029179

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2029179
vOTU ID	vOTU-021149
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029120\|Ga0168814_100600
Associated BioSample	SAMEA2737795
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	70.56 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9821
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	14.45
Jumbo phage	No

Genome content
Genome length (bp)	31,797
GC content	41.45%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	37
CDS density	92%
Average CDS length (bps)	789.16
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 70.56)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2029179_2	phrog_21101	44.8	0.00000000000044	N/A	unknown function
UniRef90	UHGV-2029179_2	UniRef90_A0A3E5ENM1	142.0	1.99965e-42	N/A	N/A
eggNOG-mapper	UHGV-2029179_2	997350.HMPREF9129_2191	83.2	6.37e-20	N/A	N/A
Pfam	UHGV-2029179_2	PF07866	N/A	N/A	N/A	DUF1653
COG	UHGV-2029179_2	COG4728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2029179_2	PF07866,TIGR02450,COG4728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2029179_3	PF06107,COG4481	N/A	N/A	N/A	N/A
KOfam	UHGV-2029179_10	K06909	385.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2029179_10	phrog_3717	149.1	1.96182e-44	terminase large subunit	head and packaging
UniRef90	UHGV-2029179_10	UniRef90_A0A6L8SYJ6	1042.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2029179_10	33035.JPJF01000106_gene3136	530.0	0	Terminase small subunit	N/A
Pfam	UHGV-2029179_10	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-2029179_10	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-2029179_10	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2029179_10	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2029179_10	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2029179_11	phrog_533	281.3	0	portal protein	head and packaging
UniRef90	UHGV-2029179_11	UniRef90_A0A1C6CDM8	701.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-2029179_11	33035.JPJF01000106_gene3135	533.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-2029179_11	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-2029179_12	phrog_581	279.1	0	minor head protein	head and packaging
UniRef90	UHGV-2029179_12	UniRef90_A0A412EKN3	805.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-2029179_12	33035.JPJF01000106_gene3134	355.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-2029179_12	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2029179_12	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2029179_12	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-2029179_13	phrog_3754	117.7	7e-35	N/A	unknown function
eggNOG-mapper	UHGV-2029179_13	476272.RUMHYD_01764	182.0	0	N/A	N/A
UniRef90	UHGV-2029179_14	UniRef90_A0A395X7A4	178.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-2029179_14	476272.RUMHYD_01766	120.0	3.06e-34	N/A	N/A
PHROG	UHGV-2029179_15	phrog_21718	131.7	3.1e-39	N/A	unknown function
eggNOG-mapper	UHGV-2029179_15	476272.RUMHYD_01768	128.0	9.14e-36	N/A	N/A
PHROG	UHGV-2029179_16	phrog_22984	90.7	9.4e-27	N/A	unknown function
PHROG	UHGV-2029179_17	phrog_16490	189.8	0	N/A	unknown function
eggNOG-mapper	UHGV-2029179_17	397290.C810_01328	188.0	0	N/A	N/A
PHROG	UHGV-2029179_18	phrog_20016	207.4	0	N/A	unknown function
UniRef90	UHGV-2029179_18	UniRef90_A0A285PT46	172.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-2029179_18	397290.C810_05214	189.0	0	N/A	N/A
structural_annotation	UHGV-2029179_18	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-2029179_19	phrog_28802	225.9	0	N/A	unknown function
eggNOG-mapper	UHGV-2029179_19	476272.RUMHYD_01772	202.0	0	N/A	N/A
PHROG	UHGV-2029179_20	phrog_194	65.8	8.1e-19	head scaffolding protein	head and packaging
UniRef90	UHGV-2029179_20	UniRef90_UPI001D14C9C8	194.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-2029179_20	476272.RUMHYD_01775	196.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-2029179_20	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-2029179_21	phrog_544	157.5	0	major head protein	head and packaging
UniRef90	UHGV-2029179_21	UniRef90_A0A395X7A1	662.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-2029179_21	1232453.BAIF02000011_gene3359	385.0	0	N/A	N/A
Pfam	UHGV-2029179_21	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-2029179_21	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2029179_22	phrog_541	103.0	1.7e-30	head-tail adaptor	connector
eggNOG-mapper	UHGV-2029179_22	476272.RUMHYD_01778	119.0	6.84e-32	N/A	N/A
PHROG	UHGV-2029179_24	phrog_1129	76.1	2.9e-22	holin	lysis
UniRef90	UHGV-2029179_24	UniRef90_A0A395X7B2	174.0	0	Enolase	N/A
eggNOG-mapper	UHGV-2029179_24	411461.DORFOR_00721	113.0	7.79e-32	N/A	N/A
Pfam	UHGV-2029179_24	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-2029179_24	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-2029179_25	phrog_3366	95.7	4.3e-28	N/A	unknown function
eggNOG-mapper	UHGV-2029179_25	476272.RUMHYD_01779	156.0	0	N/A	N/A
structural_annotation	UHGV-2029179_25	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2029179_26	phrog_556	54.9	6e-16	minor head protein	head and packaging
UniRef90	UHGV-2029179_26	UniRef90_UPI000E4989EB	319.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-2029179_26	476272.RUMHYD_01780	148.0	1.65353e-43	N/A	N/A
Pfam	UHGV-2029179_26	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-2029179_26	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-2029179_27	phrog_3266	91.9	5.2e-27	tail completion	connector
eggNOG-mapper	UHGV-2029179_27	476272.RUMHYD_01781	149.0	1.26117e-43	N/A	N/A
structural_annotation	UHGV-2029179_27	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2029179_28	phrog_3099	129.9	1.6e-38	N/A	unknown function
eggNOG-mapper	UHGV-2029179_28	411902.CLOBOL_00129	169.0	0	N/A	N/A
structural_annotation	UHGV-2029179_28	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2029179_29	phrog_11299	62.8	6.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-2029179_29	411459.RUMOBE_01382	57.4	0.0000000162	N/A	N/A
structural_annotation	UHGV-2029179_29	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-2029179_30	phrog_706	135.3	4.00001e-40	N/A	unknown function
UniRef90	UHGV-2029179_30	UniRef90_UPI001BAD00AD	211.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2029179_30	411459.RUMOBE_01383	328.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2029179_30	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2029179_30	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2029179_31	phrog_1535	308.6	0	tail length tape measure protein	tail
UniRef90	UHGV-2029179_31	UniRef90_A0A173R880	644.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-2029179_31	476272.RUMHYD_01785	681.0	0	phage tail tape measure protein	N/A
COG	UHGV-2029179_31	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2029179_31	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-2029179_32	phrog_1194	64.1	1.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-2029179_32	483218.BACPEC_01144	113.0	3.06e-30	N/A	N/A
Pfam	UHGV-2029179_32	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-2029179_32	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-2029179_33	K17256	75.8	1.3e-22	IGFALS, ALS; insulin-like growth factor-binding protein complex acid labile subunit	N/A
PHROG	UHGV-2029179_33	phrog_18190	107.5	5.4e-36	N/A	unknown function
UniRef90	UHGV-2029179_33	UniRef90_UPI000E4C0A8F	1543.0	0	bacterial Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-2029179_33	428125.CLOLEP_02759	161.0	7.99e-37	pathogenesis	N/A
Pfam	UHGV-2029179_33	PF07523	N/A	N/A	Bacterial Ig-like domain (group 3)	Big_3
Pfam	UHGV-2029179_33	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-2029179_33	COG0683	N/A	N/A	ABC-type branched-chain amino acid transport system, periplasmic component	N/A
structural_annotation	UHGV-2029179_33	PF13306,PF07523,PF05113,NF033848,NF040978,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2029179_34	PF10395,MF_03022,NF037948,COG4257	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2029179_35	1235802.C823_01049	192.0	0	N/A	N/A
Pfam	UHGV-2029179_35	PF19789	N/A	N/A	N/A	DUF6273
KOfam	UHGV-2029179_36	K07273	183.6	0	acm; lysozyme	N/A
PHROG	UHGV-2029179_36	phrog_6745	192.1	0	endolysin	lysis
UniRef90	UHGV-2029179_36	UniRef90_A0A412SB50	927.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-2029179_36	476272.RUMHYD_02876	350.0	0	autolytic lysozime (1,4-beta-N-acetylmuramidase), family 25 of glycosyl hydrolases	N/A
Pfam	UHGV-2029179_36	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-2029179_36	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-2029179_36	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-2029179_36	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-2029179_36	PF01183,PF18342,PF14603,NF040678,TIGR04303,COG3757,COG3807	N/A	N/A	N/A	N/A
KOfam	UHGV-2029179_37	K14059	91.1	1.7e-26	int; integrase	N/A
PHROG	UHGV-2029179_37	phrog_1	119.0	4.8e-35	integrase	integration and excision
UniRef90	UHGV-2029179_37	UniRef90_A0A6L8SXX0	613.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-2029179_37	1235792.C808_05256	356.0	0	Belongs to the 'phage' integrase family	N/A
COG	UHGV-2029179_37	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2029179_37	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A