UHGV-2031680 (vOTU-006697)

Viral Genome: UHGV-2031680

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2031680
vOTU ID	vOTU-006697
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029130\|Ga0168772_100402
Associated BioSample	SAMEA2737753
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.981
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	38.6
Jumbo phage	No

Genome content
Genome length (bp)	42,941
GC content	56.93%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	60
CDS density	92%
Average CDS length (bps)	661.15
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2031680_1	K00390	69.6	3.7e-20	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-2031680_1	phrog_424	77.0	2.1e-22	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2031680_1	UniRef90_UPI00164AFBC1	265.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-2031680_1	1408437.JNJN01000032_gene2312	247.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-2031680_1	BrxP_00001	41.0	0.0000000000037	BrxP	BREX
Pfam	UHGV-2031680_1	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-2031680_1	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-2031680_1	PF01507	N/A	N/A	N/A	N/A
PHROG	UHGV-2031680_2	phrog_111	157.2	0	DNA methyltransferase	other
UniRef90	UHGV-2031680_2	UniRef90_A0A1Y4EVK6	206.0	0	Adenine methyltransferase	N/A
eggNOG-mapper	UHGV-2031680_2	1121468.AUBR01000099_gene3089	189.0	0	DNA N-6-adenine-methyltransferase	N/A
PADLOC	UHGV-2031680_2	oMTase_00015	177.6	0	orphan methyltransferase	RM
Pfam	UHGV-2031680_2	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-2031680_2	PF05869,MF_03187,TIGR01712,COG2263	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2031680_4	PF14354	N/A	N/A	N/A	N/A
PHROG	UHGV-2031680_7	phrog_924	41.7	0.0000000000044	N/A	unknown function
UniRef90	UHGV-2031680_7	UniRef90_A0A417H740	142.0	3.32e-40	N/A	N/A
Pfam	UHGV-2031680_7	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-2031680_10	phrog_190	64.8	1.5e-18	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2031680_10	UniRef90_A0A830TZW4	62.8	0.000000000036	N/A	N/A
eggNOG-mapper	UHGV-2031680_10	445974.CLORAM_02947	67.8	0.0000000000000978	N/A	N/A
Pfam	UHGV-2031680_10	PF06356	N/A	N/A	N/A	DUF1064
UniRef90	UHGV-2031680_12	UniRef90_A0A3C0NNN3	79.0	0.00000000000000167	HTH psq-type domain-containing protein	N/A
KOfam	UHGV-2031680_13	K06909	105.7	5.6e-31	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2031680_13	phrog_979	216.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-2031680_13	UniRef90_A0A2V2CDD6	805.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-2031680_13	411483.FAEPRAA2165_01044	558.0	0	Terminase-like family	N/A
Pfam	UHGV-2031680_13	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-2031680_13	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2031680_13	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2031680_14	PF05534,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-2031680_16	phrog_156	287.4	0	portal protein	head and packaging
eggNOG-mapper	UHGV-2031680_16	1410650.JHWL01000003_gene2833	517.0	0	N/A	N/A
structural_annotation	UHGV-2031680_16	PF16510,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-2031680_17	K07584	48.4	0.00000000000018	N/A	N/A
PHROG	UHGV-2031680_17	phrog_4478	52.7	0.0000000000000056	peptidase	other
UniRef90	UHGV-2031680_17	UniRef90_A0A7C6WRZ1	58.2	0.00000000444	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-2031680_17	718252.FP2_29210	50.1	0.00000669	Cysteine protease Prp	N/A
Pfam	UHGV-2031680_17	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-2031680_17	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2031680_17	PF04327,NF011132,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-2031680_18	phrog_372	119.9	2e-35	tail protein	tail
UniRef90	UHGV-2031680_18	UniRef90_UPI001373A0FD	195.0	0	N/A	N/A
eggNOG-mapper	UHGV-2031680_18	1042156.CXIVA_07170	96.7	3.9e-18	tail collar domain protein	N/A
Pfam	UHGV-2031680_18	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-2031680_18	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-2031680_18	PF05895,MF_04116,NF010681,COG3401,COG4675	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2031680_19	1410650.JHWL01000003_gene2815	68.6	0.000000000756	N/A	N/A
PHROG	UHGV-2031680_20	phrog_22978	719.9	0	N/A	unknown function
eggNOG-mapper	UHGV-2031680_20	1321782.HMPREF1986_00356	196.0	0	N/A	N/A
Pfam	UHGV-2031680_20	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
PHROG	UHGV-2031680_21	phrog_13908	117.2	1e-34	N/A	unknown function
PHROG	UHGV-2031680_22	phrog_1357	200.9	0	major head protein	head and packaging
UniRef90	UHGV-2031680_22	UniRef90_A0A3C0NPN1	585.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-2031680_22	1410650.JHWL01000003_gene2830	263.0	0	N/A	N/A
NCBIFam	UHGV-2031680_22	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-2031680_22	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2031680_23	phrog_15239	51.1	0.000000000000016	N/A	unknown function
PHROG	UHGV-2031680_24	phrog_12105	111.9	3.8e-33	N/A	unknown function
eggNOG-mapper	UHGV-2031680_24	1519439.JPJG01000060_gene1891	78.2	6.11e-17	N/A	N/A
PHROG	UHGV-2031680_25	phrog_511	230.1	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-2031680_25	1410650.JHWL01000003_gene2827	311.0	0	N/A	N/A
structural_annotation	UHGV-2031680_25	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-2031680_27	phrog_355	61.6	1e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2031680_27	UniRef90_A0A417J5P5	165.0	0	N/A	N/A
eggNOG-mapper	UHGV-2031680_27	97138.C820_00250	115.0	6.35e-32	N/A	N/A
Pfam	UHGV-2031680_27	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-2031680_27	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-2031680_28	phrog_355	59.1	6.8e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2031680_28	UniRef90_A0A417J5P5	113.0	3.32e-30	N/A	N/A
eggNOG-mapper	UHGV-2031680_28	97138.C820_00250	101.0	2.53e-26	N/A	N/A
Pfam	UHGV-2031680_28	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-2031680_28	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-2031680_29	phrog_1493	58.2	1.7e-16	endolysin	lysis
UniRef90	UHGV-2031680_29	UniRef90_A0A1C6GMR6	199.0	0	NlpC/P60 family	N/A
eggNOG-mapper	UHGV-2031680_29	394503.Ccel_3272	121.0	4.89e-31	NLP P60 protein	N/A
Pfam	UHGV-2031680_29	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-2031680_29	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-2031680_29	PF01471,PF00877,NF033742,NF038080,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-2031680_30	phrog_937	65.6	8.1e-19	hemolysin	other
eggNOG-mapper	UHGV-2031680_30	1519439.JPJG01000023_gene533	92.4	3.53e-23	N/A	N/A
PHROG	UHGV-2031680_31	phrog_1129	69.3	3.9e-20	holin	lysis
UniRef90	UHGV-2031680_31	UniRef90_A0A2V2CUX8	127.0	1.19e-36	Enolase	N/A
eggNOG-mapper	UHGV-2031680_31	1226322.HMPREF1545_00069	118.0	1.02e-33	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-2031680_31	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-2031680_31	PF06946	N/A	N/A	N/A	N/A
UniRef90	UHGV-2031680_32	UniRef90_A0A8D9PDT6	82.8	5.67e-19	Transcriptional regulatory protein	N/A
structural_annotation	UHGV-2031680_33	PF20477,NF033819	N/A	N/A	N/A	N/A
PHROG	UHGV-2031680_34	phrog_22984	41.0	0.000000000035	N/A	unknown function
structural_annotation	UHGV-2031680_36	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-2031680_37	UniRef90_A0A843GWV6	91.7	5.25e-22	Rubrerythrin domain-containing protein	N/A
structural_annotation	UHGV-2031680_37	PF02255,NF007156,COG1447	N/A	N/A	N/A	N/A
KOfam	UHGV-2031680_38	K14059	94.0	2.5e-27	int; integrase	N/A
PHROG	UHGV-2031680_38	phrog_1	120.3	1.8e-35	integrase	integration and excision
UniRef90	UHGV-2031680_38	UniRef90_UPI00195CC1EE	441.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-2031680_38	411471.SUBVAR_05816	120.0	2.15e-28	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2031680_38	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2031680_38	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2031680_38	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2031680_39	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-2031680_42	K22300	42.5	0.000000000012	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2031680_42	phrog_2967	43.4	0.0000000000045	transcriptional regulator	transcription regulation
UniRef90	UHGV-2031680_42	UniRef90_UPI001EDCF802	112.0	2.66e-29	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2031680_42	411471.SUBVAR_05818	90.1	1.67e-21	sequence-specific DNA binding	N/A
Pfam	UHGV-2031680_42	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-2031680_42	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2031680_42	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-2031680_45	UniRef90_A0A1F1H878	59.3	0.00000000126	Repressor	N/A
eggNOG-mapper	UHGV-2031680_45	171693.BN988_01635	62.0	0.0000000000168	N/A	N/A
Pfam	UHGV-2031680_45	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-2031680_45	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
eggNOG-mapper	UHGV-2031680_46	1235835.C814_03153	66.2	0.000000000000148	N/A	N/A
structural_annotation	UHGV-2031680_46	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-2031680_50	phrog_2113	43.2	0.0000000000031	N/A	unknown function
UniRef90	UHGV-2031680_50	UniRef90_A0A8D9UH91	108.0	9.41e-27	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-2031680_50	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-2031680_50	PF01381,PF21715,NF041951,TIGR04176,COG1476,COG1654	N/A	N/A	N/A	N/A
PHROG	UHGV-2031680_51	phrog_253	106.9	1.9e-31	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2031680_51	UniRef90_A0A1C5N4H2	142.0	1.76e-40	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-2031680_51	1410670.JHXF01000015_gene2268	105.0	1.52e-26	Siphovirus Gp157	N/A
Pfam	UHGV-2031680_51	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-2031680_51	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-2031680_53	phrog_7838	120.5	1.4e-35	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2031680_53	UniRef90_A0A8D9UGW3	188.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-2031680_53	742767.HMPREF9456_02052	160.0	0	N/A	N/A
structural_annotation	UHGV-2031680_53	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
KOfam	UHGV-2031680_54	K03111	140.0	2.59997e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-2031680_54	phrog_44	137.7	8.00001e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2031680_54	UniRef90_A0A316NQ75	177.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-2031680_54	1007096.BAGW01000023_gene151	167.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-2031680_54	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-2031680_54	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-2031680_54	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-2031680_54	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2031680_54	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-2031680_55	phrog_270	93.9	2.1e-27	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2031680_55	UniRef90_A0A8B3R1H0	111.0	6.68e-26	Phage replication protein	N/A
eggNOG-mapper	UHGV-2031680_55	1449126.JQKL01000046_gene2061	109.0	8.03e-26	N/A	N/A
structural_annotation	UHGV-2031680_55	PF01475,NF006999,COG0735	N/A	N/A	N/A	N/A
PHROG	UHGV-2031680_56	phrog_9804	130.0	1.8e-38	N/A	unknown function
UniRef90	UHGV-2031680_56	UniRef90_A0A174S716	167.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-2031680_56	585394.RHOM_14005	117.0	6.63e-31	Loader and inhibitor of phage G40P	N/A
AcrCatalog	UHGV-2031680_56	cluster_137185	112.0	8.75e-34	NA	N/A
Pfam	UHGV-2031680_56	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-2031680_56	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-2031680_57	phrog_72	48.0	0.00000000000011	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2031680_57	UniRef90_A0A2Z4Q9W9	116.0	8.23e-30	NinB	N/A
eggNOG-mapper	UHGV-2031680_57	1304866.K413DRAFT_1197	72.8	0.0000000000000921	N/A	N/A
structural_annotation	UHGV-2031680_57	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-2031680_58	phrog_7566	74.6	1e-21	N/A	unknown function
eggNOG-mapper	UHGV-2031680_58	693746.OBV_25470	69.3	0.0000000000000761	N/A	N/A
PHROG	UHGV-2031680_59	phrog_15773	54.7	7.1e-22	N/A	unknown function
dbAPIS	UHGV-2031680_59	APIS008	N/A	N/A	Alphafold2 predicted that Gad2 is an enzyme with a nucleotidyltransferase protein domain, suggesting that it inhibits Gabija via a mechanism of action different than Gad1.	N/A
PHROG	UHGV-2031680_60	phrog_424	40.5	0.000000000044	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2031680_60	UniRef90_A0A1C5QCK7	117.0	4.3e-32	PUA domain (Predicted RNA-binding domain)	N/A
eggNOG-mapper	UHGV-2031680_60	411902.CLOBOL_06768	126.0	4.8e-34	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-2031680_60	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-2031680_60	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-2031680_60	MF_00063,TIGR02432,COG0171	N/A	N/A	N/A	N/A