Overview | |
---|---|
UHGV ID | UHGV-2039479 |
vOTU ID | vOTU-013362 |
Representative Genome? | No |
Source | IMGVR4 |
Original genome ID | 3300029343|Ga0243725_1000162|provirus_66267_109111 |
Associated BioSample | SAMN05971426 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 99.9 (High-quality) |
Trimmed provirus | No |
CheckV viral markers | 18 |
CheckV host markers | 3 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9713 |
Virus hallmark genes (geNomad) | 10 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Uncertain - viral or bacterial |
viralVerify score | 1.6 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 42,845 |
GC content | 53.87% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 57 |
CDS density | 91% |
Average CDS length (bps) | 685.53 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |