Overview | |
---|---|
UHGV ID | UHGV-2042465 |
vOTU ID | vOTU-040458 |
Representative Genome? | Yes |
Source | IMGVR4 |
Original genome ID | 3300029360|Ga0243814_1000491|provirus_1_21936 |
Associated BioSample | SAMN05971521 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 46.51 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 6 |
CheckV host markers | 1 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9622 |
Virus hallmark genes (geNomad) | 3 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 7.98 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 21,936 |
GC content | 60.42% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 36 |
CDS density | 89% |
Average CDS length (bps) | 544.75 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |