Overview | |
---|---|
UHGV ID | UHGV-2043177 |
vOTU ID | vOTU-017003 |
Representative Genome? | No |
Source | IMGVR4 |
Original genome ID | 3300029354|Ga0243832_100277|provirus_3_61349 |
Associated BioSample | SAMN05971539 |
Viral genome confidence | Uncertain |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 74.51 (Medium-quality) |
Trimmed provirus | No |
CheckV viral markers | 18 |
CheckV host markers | 2 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.965 |
Virus hallmark genes (geNomad) | 13 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Plasmid |
viralVerify score | 12.21 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 61,347 |
GC content | 51.60% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 62 |
CDS density | 89% |
Average CDS length (bps) | 882.44 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |