UHGV-2065582 (vOTU-001771)

Viral Genome: UHGV-2065582

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2065582
vOTU ID	vOTU-001771
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029381\|Ga0243902_1000827
Associated BioSample	SAMN05971614
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9698
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	44
Jumbo phage	No

Genome content
Genome length (bp)	38,757
GC content	27.99%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	70
CDS density	93%
Average CDS length (bps)	516.69
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-2065582_2	PF04545,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-2065582_5	K01447	69.6	6.2e-20	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-2065582_5	phrog_7698	161.2	0	endolysin	lysis
UniRef90	UHGV-2065582_5	UniRef90_A0A353JBB4	233.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-2065582_5	561177.ANHYDRO_01426	132.0	3.56e-34	Bacterial SH3 domain	N/A
Pfam	UHGV-2065582_5	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-2065582_5	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-2065582_5	PF01510,MF_04111,NF008758,COG3023	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2065582_6	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_7	phrog_9116	167.0	0	tail protein	tail
UniRef90	UHGV-2065582_7	UniRef90_A0A7V3QID4	143.0	4.77e-36	Collar domain-containing protein	N/A
eggNOG-mapper	UHGV-2065582_7	694427.Palpr_1970	162.0	1.71995e-41	tail collar domain protein	N/A
Pfam	UHGV-2065582_7	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
COG	UHGV-2065582_7	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-2065582_9	phrog_13879	154.5	0	N/A	unknown function
eggNOG-mapper	UHGV-2065582_9	645991.Sgly_0356	94.4	2.09e-17	N/A	N/A
structural_annotation	UHGV-2065582_9	PF14594,PF00754,NF033848,COG3500,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_10	phrog_1194	55.3	9.8e-16	N/A	unknown function
Pfam	UHGV-2065582_10	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-2065582_10	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-2065582_11	K20478	44.8	0.00000000000036	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-2065582_12	phrog_706	117.8	8.2e-35	N/A	unknown function
UniRef90	UHGV-2065582_12	UniRef90_UPI0018996FE6	113.0	3.1e-28	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2065582_12	1232449.BAHV02000010_gene2722	70.1	0.00000000000228	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2065582_12	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2065582_12	PF06854	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2065582_13	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_14	phrog_3099	121.6	5.3e-36	N/A	unknown function
eggNOG-mapper	UHGV-2065582_14	645991.Sgly_0346	97.1	2.87e-23	N/A	N/A
structural_annotation	UHGV-2065582_14	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_16	phrog_3266	83.1	2.7e-24	tail completion	connector
UniRef90	UHGV-2065582_16	UniRef90_A0A353JB81	82.4	2.24e-17	Chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-2065582_16	903814.ELI_3203	52.4	0.00000189	N/A	N/A
structural_annotation	UHGV-2065582_16	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_17	phrog_556	74.6	1.2e-21	minor head protein	head and packaging
UniRef90	UHGV-2065582_17	UniRef90_A0A7X2NEE1	82.0	5.86e-18	Capsid protein	N/A
eggNOG-mapper	UHGV-2065582_17	1300150.EMQU_2260	50.1	0.00000347	Minor capsid protein	N/A
Pfam	UHGV-2065582_17	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-2065582_17	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_18	phrog_3366	60.4	2e-17	N/A	unknown function
Pfam	UHGV-2065582_18	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-2065582_18	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_19	phrog_541	65.4	8.4e-19	head-tail adaptor	connector
PHROG	UHGV-2065582_21	phrog_422	215.3	0	major head protein	head and packaging
UniRef90	UHGV-2065582_21	UniRef90_W0U896	275.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-2065582_21	1123263.AUKY01000051_gene1080	294.0	0	N/A	N/A
structural_annotation	UHGV-2065582_21	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_22	phrog_194	52.6	0.0000000000000092	head scaffolding protein	head and packaging
UniRef90	UHGV-2065582_22	UniRef90_A0A160F7J9	61.6	0.0000000164	Phage minor structural GP20 family protein	N/A
eggNOG-mapper	UHGV-2065582_22	1430331.EP10_10360	58.5	0.0000000376	Phage minor structural protein GP20	N/A
Pfam	UHGV-2065582_22	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-2065582_23	phrog_59	111.0	7e-33	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2065582_23	UniRef90_A0A126HC40	124.0	7.2e-33	HNH endonuclease	N/A
eggNOG-mapper	UHGV-2065582_23	1423814.HMPREF0549_1779	117.0	2.01e-30	NUMOD4 motif	N/A
PADLOC	UHGV-2065582_23	HEase_00016	70.6	2.1e-20	homing endonuclease	RM
Pfam	UHGV-2065582_23	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
structural_annotation	UHGV-2065582_23	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_24	phrog_1818	98.8	4.2e-29	N/A	unknown function
UniRef90	UHGV-2065582_24	UniRef90_UPI000402ED69	72.0	0.000000000000444	HAD domain-containing protein	N/A
eggNOG-mapper	UHGV-2065582_24	1458859.A0A088C4I8_9CAUD	72.4	0.0000000000000826	N/A	N/A
Pfam	UHGV-2065582_24	PF18143	N/A	N/A	HAD domain in Swiss Army Knife RNA repair proteins	HAD_SAK_2
structural_annotation	UHGV-2065582_24	PF18143,TIGR01261	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_25	phrog_581	146.6	1.59748e-43	minor head protein	head and packaging
UniRef90	UHGV-2065582_25	UniRef90_A0A1C6B625	209.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-2065582_25	693746.OBV_18050	142.0	6.85e-34	Phage minor capsid protein 2	N/A
Pfam	UHGV-2065582_25	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2065582_25	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2065582_25	PF06152	N/A	N/A	N/A	N/A
UniRef90	UHGV-2065582_29	UniRef90_A0A0G1KGC4	64.7	0.00000000309	Modification methylase EcoRI	N/A
eggNOG-mapper	UHGV-2065582_29	641143.HMPREF9331_02194	52.4	0.00000991	N/A	N/A
Pfam	UHGV-2065582_29	PF13651	N/A	N/A	Adenine-specific methyltransferase EcoRI	EcoRI_methylase
structural_annotation	UHGV-2065582_29	PF13651,MF_00607,NF011489,COG2263	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2065582_31	PF19891,TIGR04563,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_32	phrog_533	185.5	0	portal protein	head and packaging
UniRef90	UHGV-2065582_32	UniRef90_A0A136WBU7	347.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-2065582_32	411490.ANACAC_00782	141.0	2.9e-34	N/A	N/A
Pfam	UHGV-2065582_32	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-2065582_32	PF05133,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-2065582_33	K06909	78.8	8e-23	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2065582_33	phrog_2	76.1	7e-22	terminase large subunit	head and packaging
UniRef90	UHGV-2065582_33	UniRef90_UPI001B3C8BA8	373.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-2065582_33	742723.HMPREF9477_00911	370.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-2065582_33	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-2065582_33	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2065582_33	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_34	phrog_309	174.2	0	terminase small subunit	head and packaging
UniRef90	UHGV-2065582_34	UniRef90_A0A7X5CDW9	161.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2065582_34	1035196.HMPREF9998_01273	148.0	1.54143e-43	HNH endonuclease	N/A
COG	UHGV-2065582_34	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-2065582_34	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_38	phrog_3490	123.2	1.6e-36	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2065582_38	UniRef90_A0A1C5YVB5	145.0	5.65004e-41	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-2065582_38	1256908.HMPREF0373_00660	126.0	2.8e-34	N/A	N/A
Pfam	UHGV-2065582_38	PF02732	N/A	N/A	ERCC4 domain	ERCC4
PHROG	UHGV-2065582_39	phrog_757	59.7	3.2e-17	DNA methyltransferase	other
eggNOG-mapper	UHGV-2065582_39	658655.HMPREF0988_00884	285.0	0	N/A	N/A
AcrCatalog	UHGV-2065582_39	cluster_47493	186.0	0	NA	N/A
structural_annotation	UHGV-2065582_39	PF00145,MF_00341,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-2065582_40	K00571	159.1	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-2065582_40	phrog_67	144.9	1.96182e-44	DNA methyltransferase	other
UniRef90	UHGV-2065582_40	UniRef90_A0A3E3E030	311.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-2065582_40	469596.HMPREF9488_00879	214.0	0	DNA methylase	N/A
PADLOC	UHGV-2065582_40	MTase_II_00157	153.5	0	Type II methyltransferase	RM
Pfam	UHGV-2065582_40	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-2065582_40	COG2189	N/A	N/A	Adenine specific DNA methylase Mod	N/A
structural_annotation	UHGV-2065582_40	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_41	phrog_98	60.2	2.9e-17	N/A	unknown function
UniRef90	UHGV-2065582_41	UniRef90_A0A845LIT4	129.0	1.03e-35	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-2065582_41	1158614.I592_01110	62.4	0.0000000000968	YopX protein	N/A
Pfam	UHGV-2065582_41	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-2065582_41	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-2065582_41	PF09643,TIGR01671	N/A	N/A	N/A	N/A
KOfam	UHGV-2065582_43	K00571	187.0	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-2065582_43	phrog_67	204.7	0	DNA methyltransferase	other
UniRef90	UHGV-2065582_43	UniRef90_A0A843GY32	464.0	0	Type II methyltransferase	N/A
eggNOG-mapper	UHGV-2065582_43	1527692.A0A096XVB1_9CAUD	357.0	0	helicase activity	N/A
PADLOC	UHGV-2065582_43	MTase_II_00037	421.7	0	Type II methyltransferase	RM
Pfam	UHGV-2065582_43	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
structural_annotation	UHGV-2065582_43	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_48	phrog_2164	60.2	3.2e-17	N/A	unknown function
KOfam	UHGV-2065582_52	K02314	156.9	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-2065582_52	phrog_19	187.9	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2065582_52	UniRef90_A0A223MJF7	233.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-2065582_52	1232449.BAHV02000016_gene1835	231.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-2065582_52	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-2065582_52	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-2065582_52	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
UniRef90	UHGV-2065582_53	UniRef90_A0A6G7Y1V7	95.9	2.02e-20	YdaU family protein	N/A
structural_annotation	UHGV-2065582_55	PF02381,TIGR01439,COG2002	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_56	phrog_18107	110.0	2.6e-32	N/A	unknown function
UniRef90	UHGV-2065582_56	UniRef90_R6I207	98.6	2.12e-22	PF05037 family protein	N/A
eggNOG-mapper	UHGV-2065582_56	1200557.JHWV01000001_gene292	97.4	1.04e-22	N/A	N/A
Pfam	UHGV-2065582_56	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-2065582_56	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_57	phrog_314	66.2	7.1e-19	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2065582_57	UniRef90_A0A075KJD6	129.0	2.02e-33	Putative truncated GIY-YIG endonuclease	N/A
Pfam	UHGV-2065582_57	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
structural_annotation	UHGV-2065582_57	PF15653,PF07453,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_58	phrog_2872	159.5	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2065582_58	UniRef90_A0A2G6HUQ4	114.0	2.19e-25	PDDEXK_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-2065582_58	1304866.K413DRAFT_0827	228.0	0	AAA domain	N/A
Pfam	UHGV-2065582_58	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-2065582_58	PF13479,PF12705,MF_03030,MF_00268,TIGR01618,TIGR00372,COG0468,COG4343	N/A	N/A	N/A	N/A
Pfam	UHGV-2065582_59	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-2065582_59	PF12441,NF041793,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_64	phrog_3754	47.7	0.000000000000014	N/A	unknown function
eggNOG-mapper	UHGV-2065582_64	1226322.HMPREF1545_00073	54.7	0.0000000654	N/A	N/A
PHROG	UHGV-2065582_65	phrog_28802	41.0	0.000000000017	N/A	unknown function
eggNOG-mapper	UHGV-2065582_65	476272.RUMHYD_01772	59.3	0.0000000147	N/A	N/A
structural_annotation	UHGV-2065582_67	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-2065582_68	phrog_16490	159.4	0	N/A	unknown function
eggNOG-mapper	UHGV-2065582_68	476272.RUMHYD_01770	75.5	0.000000000000145	N/A	N/A
eggNOG-mapper	UHGV-2065582_69	658655.HMPREF0988_00918	55.8	0.00000000214	N/A	N/A