UHGV-2073049 (vOTU-129126)

Viral Genome: UHGV-2073049

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2073049
vOTU ID	vOTU-129126
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029372\|Ga0243963_100916
Associated BioSample	SAMN05971675
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	76.5 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9811
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	49.29
Jumbo phage	No

Genome content
Genome length (bp)	30,019
GC content	41.08%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	55
CDS density	88%
Average CDS length (bps)	478.53
Total tRNA genes	9
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 76.5)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2073049_1	phrog_58	119.3	4.2e-35	tail length tape measure protein	tail
PHROG	UHGV-2073049_2	phrog_1533	445.6	0	tail length tape measure protein	tail
UniRef90	UHGV-2073049_2	UniRef90_R5TQ69	1150.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-2073049_2	903814.ELI_1307	419.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-2073049_2	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-2073049_2	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-2073049_2	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
PHROG	UHGV-2073049_3	phrog_3033	58.4	1.1e-16	N/A	unknown function
UniRef90	UHGV-2073049_3	UniRef90_A0A2X2UJ60	68.9	0.0000000000000177	Phage-like protein	N/A
eggNOG-mapper	UHGV-2073049_3	1341157.RF007C_02605	72.0	1.79e-16	N/A	N/A
PHROG	UHGV-2073049_4	phrog_709	113.7	8.2e-34	N/A	unknown function
eggNOG-mapper	UHGV-2073049_4	879305.HMPREF9290_0132	121.0	7.69e-34	N/A	N/A
structural_annotation	UHGV-2073049_4	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-2073049_5	phrog_88	128.4	5.1e-38	major tail protein	tail
UniRef90	UHGV-2073049_5	UniRef90_A0A2N5NUL1	346.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-2073049_5	610130.Closa_0749	162.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-2073049_5	TIGR01603.1	N/A	N/A	major tail protein	N/A
PHROG	UHGV-2073049_6	phrog_78	47.7	0.0000000000003	tail terminator	connector
eggNOG-mapper	UHGV-2073049_6	483218.BACPEC_01313	115.0	5.6e-32	N/A	N/A
structural_annotation	UHGV-2073049_6	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-2073049_7	phrog_5	53.7	0.0000000000000055	tail completion or Neck1 protein	connector
UniRef90	UHGV-2073049_7	UniRef90_A0A4R3JAK0	166.0	0	Bacteriophage HK97-gp10 putative tail-component	N/A
eggNOG-mapper	UHGV-2073049_7	411473.RUMCAL_01154	84.7	1.9e-19	N/A	N/A
Pfam	UHGV-2073049_7	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-2073049_7	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-2073049_8	phrog_19734	73.4	2.6e-21	N/A	unknown function
eggNOG-mapper	UHGV-2073049_8	1235792.C808_00088	102.0	2.72e-26	N/A	N/A
structural_annotation	UHGV-2073049_8	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2073049_9	phrog_749	73.4	2.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-2073049_9	1235792.C808_00087	98.2	1.82e-25	N/A	N/A
PHROG	UHGV-2073049_10	phrog_10	133.5	1.6e-39	major head protein	head and packaging
UniRef90	UHGV-2073049_10	UniRef90_A0A4R3JAF4	812.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-2073049_10	1235792.C808_00086	538.0	0	Phage capsid family	N/A
Pfam	UHGV-2073049_10	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-2073049_10	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-2073049_10	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-2073049_10	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-2073049_11	K01358	114.4	1.4e-33	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-2073049_11	phrog_94	188.6	0	head maturation protease	head and packaging
UniRef90	UHGV-2073049_11	UniRef90_A0A6N3GKE0	468.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-2073049_11	610130.Closa_0743	357.0	0	Clp protease	N/A
Pfam	UHGV-2073049_11	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-2073049_11	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-2073049_11	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-2073049_12	phrog_12	120.5	1e-35	portal protein	head and packaging
UniRef90	UHGV-2073049_12	UniRef90_R5TQ78	730.0	0	Phage portal protein HK97 family	N/A
eggNOG-mapper	UHGV-2073049_12	610130.Closa_0742	475.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-2073049_12	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-2073049_12	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-2073049_12	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-2073049_12	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-2073049_13	phrog_9	262.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-2073049_13	UniRef90_A0A2N5NUK9	1188.0	0	Terminase	N/A
eggNOG-mapper	UHGV-2073049_13	610130.Closa_0741	937.0	0	Phage Terminase	N/A
Pfam	UHGV-2073049_13	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-2073049_13	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-2073049_13	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-2073049_13	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-2073049_14	phrog_5110	119.4	1.2e-35	terminase small subunit	head and packaging
UniRef90	UHGV-2073049_14	UniRef90_UPI001A9A3020	259.0	0	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-2073049_14	349161.Dred_2608	124.0	2.14e-35	N/A	N/A
Pfam	UHGV-2073049_14	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-2073049_14	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-2073049_15	K07451	45.5	0.0000000000014	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-2073049_15	phrog_119	77.0	2.6e-22	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2073049_15	UniRef90_R5TPY3	238.0	0	Phage related protein	N/A
eggNOG-mapper	UHGV-2073049_15	1235792.C808_00081	170.0	0	HNH nucleases	N/A
Pfam	UHGV-2073049_15	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-2073049_15	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
UniRef90	UHGV-2073049_16	UniRef90_UPI00156EF43B	67.8	0.000000000000131	chemotaxis protein	N/A
eggNOG-mapper	UHGV-2073049_16	658088.HMPREF0987_01711	103.0	1.37e-28	N/A	N/A
structural_annotation	UHGV-2073049_16	PF10723,NF008671,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-2073049_18	phrog_36	62.4	8.4e-18	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-2073049_18	742765.HMPREF9457_02116	147.0	2.77457e-43	N/A	N/A
structural_annotation	UHGV-2073049_18	PF02996	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2073049_20	411470.RUMGNA_02203	277.0	0	N/A	N/A
UniRef90	UHGV-2073049_22	UniRef90_A0A2N5PB17	363.0	0	N/A	N/A
eggNOG-mapper	UHGV-2073049_22	742723.HMPREF9477_00919	83.6	8.07e-18	N/A	N/A
Pfam	UHGV-2073049_22	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-2073049_22	NF041588	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2073049_23	PF02895	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2073049_28	97139.C824_00033	56.2	0.00000000592	N/A	N/A
KOfam	UHGV-2073049_29	K00390	95.4	3e-28	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-2073049_29	phrog_424	125.4	4.1e-37	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2073049_29	UniRef90_A0A6N3DEG0	610.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-2073049_29	1232452.BAIB02000007_gene1640	448.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-2073049_29	BrxP_00001	66.9	5.4e-21	BrxP	BREX
Pfam	UHGV-2073049_29	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-2073049_29	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-2073049_29	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-2073049_31	phrog_2600	120.4	1.9e-35	N/A	unknown function
eggNOG-mapper	UHGV-2073049_31	1178540.BA70_18565	186.0	0	N/A	N/A
PHROG	UHGV-2073049_32	phrog_1163	230.0	0	N/A	unknown function
UniRef90	UHGV-2073049_32	UniRef90_A0A415S878	541.0	0	Replication protein	N/A
eggNOG-mapper	UHGV-2073049_32	1042163.BRLA_c031420	185.0	0	Conserved phage C-terminus (Phg_2220_C)	N/A
Pfam	UHGV-2073049_32	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
Pfam	UHGV-2073049_32	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-2073049_32	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-2073049_32	COG1846	N/A	N/A	DNA-binding transcriptional regulator, MarR family	N/A
structural_annotation	UHGV-2073049_32	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
KOfam	UHGV-2073049_33	K01160	56.0	0.0000000000000012	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-2073049_33	phrog_140	132.7	2e-39	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2073049_33	UniRef90_A7B3R6	266.0	0	Crossover junction endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-2073049_33	411470.RUMGNA_02196	266.0	0	COG COG4570 Holliday junction resolvase	N/A
Pfam	UHGV-2073049_33	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-2073049_33	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-2073049_33	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-2073049_34	phrog_7566	65.1	6.9e-19	N/A	unknown function
UniRef90	UHGV-2073049_34	UniRef90_A0A2N5NVH0	261.0	0	Phosphoenolpyruvate carboxykinase	N/A
PHROG	UHGV-2073049_35	phrog_72	49.2	0.000000000000083	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2073049_35	411470.RUMGNA_02194	331.0	0	N/A	N/A
structural_annotation	UHGV-2073049_35	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-2073049_36	phrog_14970	285.6	0	N/A	unknown function
eggNOG-mapper	UHGV-2073049_36	411470.RUMGNA_02193	275.0	0	double-strand break repair protein	N/A
COG	UHGV-2073049_36	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-2073049_36	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-2073049_37	phrog_253	123.9	1.1e-36	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2073049_37	UniRef90_A7B3R2	281.0	0	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-2073049_37	411470.RUMGNA_02192	281.0	0	Siphovirus Gp157	N/A
Pfam	UHGV-2073049_37	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-2073049_37	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-2073049_42	phrog_36464	61.6	1.6e-17	N/A	unknown function
eggNOG-mapper	UHGV-2073049_42	411461.DORFOR_01136	63.2	0.0000000000028	N/A	N/A
structural_annotation	UHGV-2073049_42	PF09035	N/A	N/A	N/A	N/A
KOfam	UHGV-2073049_45	K07741	139.9	3.69999e-41	antB; anti-repressor protein	N/A
PHROG	UHGV-2073049_45	phrog_63	143.1	2.10055e-42	anti-repressor Ant	transcription regulation
UniRef90	UHGV-2073049_45	UniRef90_A7B3Q4	456.0	0	AntA/AntB antirepressor	N/A
eggNOG-mapper	UHGV-2073049_45	411470.RUMGNA_02184	456.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-2073049_45	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-2073049_45	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-2073049_45	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-2073049_45	PF09669,PF03374,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-2073049_47	phrog_373	110.1	2.6e-32	anti-repressor	transcription regulation
UniRef90	UHGV-2073049_47	UniRef90_UPI000E4A5456	466.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2073049_47	1304866.K413DRAFT_3063	316.0	0	TIGRFAM phage regulatory protein, Rha family	N/A
Pfam	UHGV-2073049_47	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-2073049_47	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-2073049_47	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-2073049_47	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-2073049_49	phrog_20330	92.1	4.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-2073049_49	235909.GK0498	82.0	1.59e-18	N/A	N/A
KOfam	UHGV-2073049_51	K18830	49.2	0.000000000000084	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-2073049_51	phrog_8	42.3	0.000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-2073049_51	UniRef90_UPI000677B37D	207.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2073049_51	1235798.C817_05486	140.0	2.31999e-41	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-2073049_51	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-2073049_51	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2073049_51	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-2073049_54	K14059	161.9	0	int; integrase	N/A
PHROG	UHGV-2073049_54	phrog_1	161.6	0	integrase	integration and excision
UniRef90	UHGV-2073049_54	UniRef90_A0A3E4V887	724.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-2073049_54	1232453.BAIF02000027_gene4194	454.0	0	Phage integrase family	N/A
Pfam	UHGV-2073049_54	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2073049_54	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2073049_54	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-2073049_55	UniRef90_A0A6M2DUE3	84.0	1.23e-19	Hipothetical protein (Fragment)	N/A
eggNOG-mapper	UHGV-2073049_55	1232452.BAIB02000025_gene2970	116.0	5.64e-34	N/A	N/A