UHGV-2086145 (vOTU-007785)

Viral Genome: UHGV-2086145

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2086145
vOTU ID	vOTU-007785
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029496\|Ga0244086_100031\|provirus_27843_66946
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	Yes
CheckV viral markers	21
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9736
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	62.25
Jumbo phage	No

Genome content
Genome length (bp)	36,709
GC content	44.38%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	49
CDS density	94%
Average CDS length (bps)	703.10
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2086145_1	phrog_11747	328.9	0	N/A	unknown function
UniRef90	UHGV-2086145_1	UniRef90_A0A7X4ZGL9	382.0	0	Serine protease	N/A
eggNOG-mapper	UHGV-2086145_1	1158602.I590_03017	330.0	0	Serine dehydrogenase proteinase	N/A
Pfam	UHGV-2086145_1	PF01972	N/A	N/A	Serine dehydrogenase proteinase	SDH_sah
COG	UHGV-2086145_1	COG0616	N/A	N/A	Periplasmic serine protease, ClpP class	N/A
structural_annotation	UHGV-2086145_1	PF01972,MF_00444,TIGR00706,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_3	phrog_297	175.6	0	holin	lysis
UniRef90	UHGV-2086145_3	UniRef90_A0A356CY82	463.0	0	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-2086145_3	1160721.RBI_II00521	94.0	3.74e-20	hydrolase, family 25	N/A
Pfam	UHGV-2086145_3	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-2086145_3	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-2086145_3	PF06940,TIGR02594,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_4	phrog_199	80.6	1.8e-23	holin	lysis
UniRef90	UHGV-2086145_4	UniRef90_A0A373XMP0	276.0	0	Holin	N/A
eggNOG-mapper	UHGV-2086145_4	1160721.RBI_I01565	181.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-2086145_4	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-2086145_4	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-2086145_4	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-2086145_4	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_5	phrog_134	44.7	0.0000000000018	N/A	unknown function
UniRef90	UHGV-2086145_5	UniRef90_A0A374HLL3	89.0	1.63e-22	XkdX family protein	N/A
eggNOG-mapper	UHGV-2086145_5	1298920.KI911353_gene4834	61.6	0.00000000000181	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-2086145_5	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-2086145_5	PF09693,TIGR01669	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2086145_7	1410617.JHXH01000006_gene232	85.1	0.0000000000000121	N/A	N/A
structural_annotation	UHGV-2086145_7	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_9	phrog_9680	49.1	0.0000000000000032	host range and adsorption protein	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-2086145_9	1160721.RBI_II00526	621.0	0	N/A	N/A
structural_annotation	UHGV-2086145_9	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_10	phrog_1194	88.3	6.7e-26	N/A	unknown function
eggNOG-mapper	UHGV-2086145_10	1160721.RBI_II00527	211.0	0	N/A	N/A
structural_annotation	UHGV-2086145_10	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_11	phrog_1535	313.0	0	tail length tape measure protein	tail
UniRef90	UHGV-2086145_11	UniRef90_R6TDK7	1305.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-2086145_11	1226322.HMPREF1545_00059	462.0	0	tape measure	N/A
COG	UHGV-2086145_11	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-2086145_11	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_12	phrog_706	146.1	1.90577e-43	N/A	unknown function
UniRef90	UHGV-2086145_12	UniRef90_UPI001B3C82AE	216.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2086145_12	1449050.JNLE01000003_gene3882	197.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2086145_12	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2086145_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_13	phrog_11299	185.6	0	N/A	unknown function
structural_annotation	UHGV-2086145_13	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_14	phrog_3099	147.4	6.86636e-44	N/A	unknown function
eggNOG-mapper	UHGV-2086145_14	1160721.RBI_II00532	206.0	0	N/A	N/A
structural_annotation	UHGV-2086145_14	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_15	phrog_3266	123.3	1.1e-36	tail completion	connector
eggNOG-mapper	UHGV-2086145_15	411902.CLOBOL_00130	112.0	1.53e-29	N/A	N/A
structural_annotation	UHGV-2086145_15	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_16	phrog_556	120.6	6e-36	minor head protein	head and packaging
UniRef90	UHGV-2086145_16	UniRef90_A0A1M7NJ72	124.0	9.77e-34	Minor capsid protein	N/A
eggNOG-mapper	UHGV-2086145_16	1449050.JNLE01000003_gene3886	110.0	5.59e-29	N/A	N/A
Pfam	UHGV-2086145_16	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-2086145_16	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_17	phrog_3366	76.3	3.8e-23	N/A	unknown function
eggNOG-mapper	UHGV-2086145_17	1449050.JNLE01000003_gene3887	83.2	5.46e-19	N/A	N/A
Pfam	UHGV-2086145_17	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-2086145_17	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_18	phrog_541	93.3	2e-27	head-tail adaptor	connector
UniRef90	UHGV-2086145_18	UniRef90_A0A371AQT0	103.0	3.51e-26	N/A	N/A
eggNOG-mapper	UHGV-2086145_18	1304866.K413DRAFT_3039	95.5	9.97e-24	N/A	N/A
PHROG	UHGV-2086145_19	phrog_544	343.7	0	major head protein	head and packaging
UniRef90	UHGV-2086145_19	UniRef90_R6T873	668.0	0	Major head protein	N/A
eggNOG-mapper	UHGV-2086145_19	936580.HMPREF1516_0718	313.0	0	N/A	N/A
NCBIFam	UHGV-2086145_19	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-2086145_19	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_20	phrog_194	101.1	1.3e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-2086145_20	UniRef90_R6U550	374.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-2086145_20	742765.HMPREF9457_02126	154.0	1.12104e-44	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-2086145_20	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-2086145_20	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2086145_21	PF12305	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_22	phrog_581	336.8	0	minor head protein	head and packaging
UniRef90	UHGV-2086145_22	UniRef90_R6SXL7	992.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-2086145_22	658655.HMPREF0988_02563	409.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-2086145_22	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2086145_22	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2086145_22	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_23	phrog_533	348.1	0	portal protein	head and packaging
UniRef90	UHGV-2086145_23	UniRef90_R6TDI6	889.0	0	Phage portal protein SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-2086145_23	1304866.K413DRAFT_3035	438.0	0	N/A	N/A
structural_annotation	UHGV-2086145_23	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-2086145_24	K06909	418.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2086145_24	phrog_18557	160.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-2086145_24	UniRef90_A0A1C6IMR2	1094.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-2086145_24	411461.DORFOR_01162	665.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-2086145_24	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-2086145_24	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-2086145_24	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2086145_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2086145_24	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2086145_26	768710.DesyoDRAFT_5186	259.0	0	N/A	N/A
AcrCatalog	UHGV-2086145_26	cluster_38765	164.0	0	NA	N/A
structural_annotation	UHGV-2086145_26	PF15931,NF001462,COG2974	N/A	N/A	N/A	N/A
UniRef90	UHGV-2086145_27	UniRef90_A0A5R9MHA3	231.0	0	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-2086145_27	875454.BAEW01000002_gene486	51.6	0.00000158	N/A	N/A
structural_annotation	UHGV-2086145_27	PF07374	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_28	phrog_986	79.9	2.6e-23	RNA-binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2086145_28	UniRef90_A0A373XQS7	231.0	0	N/A	N/A
eggNOG-mapper	UHGV-2086145_28	2754.EH55_06950	68.6	0.000000000000224	N/A	N/A
Pfam	UHGV-2086145_28	PF12961	N/A	N/A	N/A	DUF3850
structural_annotation	UHGV-2086145_28	PF12961,MF_00771,NF003443,COG4043	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2086145_29	PF08141,MF_00667,TIGR02861,COG0231	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_30	phrog_140	87.1	2.4e-25	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2086145_30	UniRef90_A0A373Y8T3	259.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-2086145_30	411462.DORLON_00806	192.0	0	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-2086145_30	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-2086145_30	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-2086145_30	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-2086145_31	K07505	435.3	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-2086145_31	phrog_2597	1196.0	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2086145_31	UniRef90_A0A1C6E992	1511.0	0	Regulatory protein repA	N/A
eggNOG-mapper	UHGV-2086145_31	394503.Ccel_3304	1025.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-2086145_31	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-2086145_31	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-2086145_31	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-2086145_31	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-2086145_32	K17677	349.2	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-2086145_32	phrog_16	284.2	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2086145_32	UniRef90_A0A1C6E943	1042.0	0	Type-1 restriction enzyme R protein	N/A
eggNOG-mapper	UHGV-2086145_32	1235792.C808_05388	817.0	0	helicase superfamily c-terminal domain	N/A
PADLOC	UHGV-2086145_32	mREase_IV_00005	122.7	3.6e-36	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-2086145_32	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-2086145_32	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-2086145_32	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-2086145_32	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_33	phrog_2698	192.7	0	N/A	unknown function
UniRef90	UHGV-2086145_33	UniRef90_UPI001D0882DA	236.0	0	N/A	N/A
eggNOG-mapper	UHGV-2086145_33	742723.HMPREF9477_00927	164.0	0	N/A	N/A
structural_annotation	UHGV-2086145_33	PF17426,NF005674	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_34	phrog_124	244.0	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2086145_34	UniRef90_UPI000F52E538	486.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-2086145_34	1235792.C808_05390	426.0	0	AAA domain	N/A
Pfam	UHGV-2086145_34	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-2086145_34	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-2086145_35	K03546	60.9	1.6e-17	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-2086145_35	phrog_1499	472.3	0	N/A	unknown function
UniRef90	UHGV-2086145_35	UniRef90_A0A1C6E8X2	761.0	0	Chromosome segregation protein	N/A
eggNOG-mapper	UHGV-2086145_35	641112.ACOK01000073_gene2873	521.0	0	domain protein	N/A
Pfam	UHGV-2086145_35	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-2086145_35	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-2086145_35	PF11398,MF_00365,TIGR00634,COG0497	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2086145_40	PF11372	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_41	phrog_14088	40.5	0.000000000019	N/A	unknown function
UniRef90	UHGV-2086145_41	UniRef90_A0A1C6GIT4	254.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2086145_41	626523.GCWU000342_01045	53.1	0.0000000752	N/A	N/A
PHROG	UHGV-2086145_42	phrog_5079	61.9	8.7e-18	N/A	unknown function
eggNOG-mapper	UHGV-2086145_42	1341157.RF007C_05240	45.4	0.00000395	N/A	N/A
UniRef90	UHGV-2086145_43	UniRef90_R6C4T1	105.0	1.65e-28	Putative phage protein	N/A
structural_annotation	UHGV-2086145_43	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-2086145_44	UniRef90_R6TEQ2	142.0	2.67648e-43	Conserved domain protein	N/A
eggNOG-mapper	UHGV-2086145_44	246199.CUS_5910	120.0	4.55e-35	N/A	N/A
structural_annotation	UHGV-2086145_44	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-2086145_45	K01356	122.8	4.6e-36	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-2086145_45	phrog_4	137.5	1.10001e-40	transcriptional repressor	transcription regulation
UniRef90	UHGV-2086145_45	UniRef90_R6T2B0	434.0	0	Peptidase S24-like protein	N/A
eggNOG-mapper	UHGV-2086145_45	246199.CUS_5911	233.0	0	N/A	N/A
Pfam	UHGV-2086145_45	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
Pfam	UHGV-2086145_45	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-2086145_45	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-2086145_45	PF00717,PF12844,MF_00015,TIGR00498,TIGR03070,COG1974,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_46	phrog_10292	54.8	3.6e-16	N/A	unknown function
UniRef90	UHGV-2086145_46	UniRef90_R6T9F1	270.0	0	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-2086145_46	537013.CLOSTMETH_02269	85.1	2.2e-19	TM2 domain	N/A
Pfam	UHGV-2086145_46	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-2086145_46	COG2314	N/A	N/A	N/A	N/A
PHROG	UHGV-2086145_47	phrog_9605	381.6	0	N/A	unknown function
UniRef90	UHGV-2086145_47	UniRef90_UPI0014593EBE	436.0	0	N/A	N/A
eggNOG-mapper	UHGV-2086145_47	478749.BRYFOR_09856	383.0	0	N/A	N/A
Pfam	UHGV-2086145_47	PF12358	N/A	N/A	N/A	DUF3644
Pfam	UHGV-2086145_47	PF18740	N/A	N/A	EC042_2821-like Restriction Endonuclease-like domain	EC042_2821
structural_annotation	UHGV-2086145_47	PF12358,COG1895	N/A	N/A	N/A	N/A
KOfam	UHGV-2086145_48	K14059	249.7	0	int; integrase	N/A
PHROG	UHGV-2086145_48	phrog_1	211.4	0	integrase	integration and excision
UniRef90	UHGV-2086145_48	UniRef90_A0A1C6FGR9	747.0	0	Integrase	N/A
eggNOG-mapper	UHGV-2086145_48	1408823.AXUS01000024_gene2685	174.0	0	Arm DNA-binding domain	N/A
Pfam	UHGV-2086145_48	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-2086145_48	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2086145_48	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2086145_48	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2086145_49	1160721.RBI_II00383	382.0	0	N/A	N/A