UHGV-2099896 (vOTU-059335)

Viral Genome: UHGV-2099896

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2099896
vOTU ID	vOTU-059335
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029437\|Ga0242826_1000828
Associated BioSample	SAMN05545074
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	6
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9822
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	21.96
Jumbo phage	No

Genome content
Genome length (bp)	41,698
GC content	57.40%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	54
CDS density	95%
Average CDS length (bps)	733.67
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-2099896_1	UniRef90_UPI0013C3FC23	48.9	0.0000035	chromate transporter	N/A
eggNOG-mapper	UHGV-2099896_1	1304866.K413DRAFT_4686	84.0	8.95e-21	N/A	N/A
PHROG	UHGV-2099896_2	phrog_25567	50.3	0.000000000000033	N/A	unknown function
eggNOG-mapper	UHGV-2099896_2	1235798.C817_04600	59.3	0.000000000769	N/A	N/A
structural_annotation	UHGV-2099896_2	NF040522,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-2099896_4	phrog_3584	127.0	1.2e-37	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2099896_4	1226322.HMPREF1545_03841	144.0	1.31e-38	N/A	N/A
structural_annotation	UHGV-2099896_4	PF01446,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-2099896_14	phrog_355	62.4	7e-18	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2099896_14	UniRef90_A0A415G5B2	141.0	1.21002e-41	N/A	N/A
eggNOG-mapper	UHGV-2099896_14	397290.C810_05229	141.0	2.22947e-42	N/A	N/A
Pfam	UHGV-2099896_14	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-2099896_14	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
Pfam	UHGV-2099896_16	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-2099896_16	NF041588	N/A	N/A	N/A	N/A
KOfam	UHGV-2099896_17	K00558	160.8	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-2099896_17	phrog_363	250.4	0	DNA methyltransferase	other
UniRef90	UHGV-2099896_17	UniRef90_G4KRB8	340.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-2099896_17	693746.OBV_01900	340.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-2099896_17	MTase_II_00058	121.8	8e-36	Type II methyltransferase	RM
Pfam	UHGV-2099896_17	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-2099896_17	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-2099896_17	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-2099896_17	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-2099896_18	phrog_4433	179.7	0	N/A	unknown function
eggNOG-mapper	UHGV-2099896_18	665950.HMPREF1025_01373	112.0	6.44e-27	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-2099896_18	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
KOfam	UHGV-2099896_19	K22300	48.1	0.00000000000025	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
Pfam	UHGV-2099896_19	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-2099896_19	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
PHROG	UHGV-2099896_22	phrog_7566	90.9	8.8e-27	N/A	unknown function
UniRef90	UHGV-2099896_22	UniRef90_A0A3D5LSW4	60.5	0.000000000487	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-2099896_22	693746.OBV_24070	102.0	5.38e-27	N/A	N/A
KOfam	UHGV-2099896_26	K22300	66.4	6.2e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2099896_26	phrog_8	53.5	0.0000000000000051	transcriptional regulator	transcription regulation
UniRef90	UHGV-2099896_26	UniRef90_A0A417W960	122.0	1.72e-33	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2099896_26	445972.ANACOL_03315	115.0	9.22e-32	N/A	N/A
Pfam	UHGV-2099896_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2099896_26	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2099896_26	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2099896_28	1232449.BAHV02000010_gene3216	60.5	0.00000017	Metallo-beta-lactamase superfamily	N/A
Pfam	UHGV-2099896_28	PF02805	N/A	N/A	Metal binding domain of Ada	Ada_Zn_binding
COG	UHGV-2099896_28	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
Pfam	UHGV-2099896_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-2099896_30	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-2099896_31	K14059	122.9	4.2e-36	int; integrase	N/A
PHROG	UHGV-2099896_31	phrog_1	126.8	2.3e-37	integrase	integration and excision
UniRef90	UHGV-2099896_31	UniRef90_A0A174DBH0	327.0	0	Site-specific tyrosine recombinase XerC	N/A
eggNOG-mapper	UHGV-2099896_31	1514668.JOOA01000001_gene242	117.0	2.34e-27	Phage integrase family	N/A
Pfam	UHGV-2099896_31	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2099896_31	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2099896_31	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2099896_32	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-2099896_33	phrog_20016	190.0	0	N/A	unknown function
UniRef90	UHGV-2099896_33	UniRef90_A0A285PT46	178.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-2099896_33	1226322.HMPREF1545_00077	162.0	0	N/A	N/A
structural_annotation	UHGV-2099896_33	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-2099896_34	phrog_16490	120.0	8e-36	N/A	unknown function
eggNOG-mapper	UHGV-2099896_34	1408437.JNJN01000043_gene803	140.0	3.75e-38	N/A	N/A
PHROG	UHGV-2099896_35	phrog_22984	55.9	8e-17	N/A	unknown function
PHROG	UHGV-2099896_36	phrog_21718	85.4	5.5e-25	N/A	unknown function
UniRef90	UHGV-2099896_36	UniRef90_A0A285PT36	58.5	0.0000000266	Consensus disorder prediction	N/A
eggNOG-mapper	UHGV-2099896_36	476272.RUMHYD_01768	82.0	2.49e-18	N/A	N/A
PHROG	UHGV-2099896_37	phrog_3754	98.9	4.8e-29	N/A	unknown function
eggNOG-mapper	UHGV-2099896_37	1226322.HMPREF1545_00073	156.0	0	N/A	N/A
eggNOG-mapper	UHGV-2099896_38	1519439.JPJG01000060_gene1905	598.0	0	N/A	N/A
Pfam	UHGV-2099896_38	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
Pfam	UHGV-2099896_38	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
eggNOG-mapper	UHGV-2099896_39	1203606.HMPREF1526_02741	78.2	0.000000000000184	N/A	N/A
PHROG	UHGV-2099896_40	phrog_156	213.7	0	portal protein	head and packaging
eggNOG-mapper	UHGV-2099896_40	1519439.JPJG01000060_gene1886	538.0	0	N/A	N/A
structural_annotation	UHGV-2099896_40	PF16510,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-2099896_41	K06909	215.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2099896_41	phrog_3717	202.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-2099896_41	UniRef90_A0A1Y3SC75	576.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-2099896_41	1226322.HMPREF1545_03843	567.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-2099896_41	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-2099896_41	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2099896_41	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2099896_41	PF04466,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2099896_42	phrog_511	162.0	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-2099896_42	1519439.JPJG01000060_gene1903	281.0	0	N/A	N/A
structural_annotation	UHGV-2099896_42	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-2099896_44	phrog_371	119.9	2.2e-35	major head protein	head and packaging
UniRef90	UHGV-2099896_44	UniRef90_A0A8F2JBL2	248.0	0	Mu-like prophage major head subunit gpT family protein	N/A
eggNOG-mapper	UHGV-2099896_44	1226322.HMPREF1545_03848	275.0	0	N/A	N/A
Pfam	UHGV-2099896_44	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
structural_annotation	UHGV-2099896_44	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2099896_45	phrog_24113	81.2	9.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-2099896_45	1226322.HMPREF1545_03847	67.4	0.00000000000246	N/A	N/A
structural_annotation	UHGV-2099896_45	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-2099896_46	phrog_35275	153.0	0	N/A	unknown function
eggNOG-mapper	UHGV-2099896_46	1226322.HMPREF1545_03846	132.0	2.25e-33	N/A	N/A
structural_annotation	UHGV-2099896_48	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-2099896_49	phrog_21357	134.5	5.30001e-40	endolysin	lysis
UniRef90	UHGV-2099896_49	UniRef90_D4MVQ6	152.0	6.13068e-42	CHAP domain	N/A
eggNOG-mapper	UHGV-2099896_49	693746.OBV_19030	128.0	1.78e-33	CHAP domain	N/A
Pfam	UHGV-2099896_49	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-2099896_49	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-2099896_49	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-2099896_49	PF01471,PF00877,TIGR02594,TIGR03979,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-2099896_50	phrog_881	86.1	2.1e-25	holin	lysis
UniRef90	UHGV-2099896_50	UniRef90_A0A4Q7P349	112.0	2.06e-31	Dp-1 family holin	N/A
eggNOG-mapper	UHGV-2099896_50	742740.HMPREF9474_02251	113.0	2.64e-32	Putative phage holin Dp-1	N/A
Pfam	UHGV-2099896_50	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-2099896_50	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-2099896_51	phrog_937	49.7	0.000000000000074	hemolysin	other
eggNOG-mapper	UHGV-2099896_51	1297617.JPJD01000099_gene2176	48.9	0.00000333	N/A	N/A
Pfam	UHGV-2099896_52	PF11192	N/A	N/A	N/A	DUF2977
KOfam	UHGV-2099896_53	K07296	43.0	0.0000000000036	ADIPOQ, ACDC; adiponectin	N/A
PHROG	UHGV-2099896_53	phrog_12105	74.6	6.2e-22	N/A	unknown function
Pfam	UHGV-2099896_53	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-2099896_53	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-2099896_54	phrog_606	72.5	1.7e-21	terminase small subunit	head and packaging
eggNOG-mapper	UHGV-2099896_54	1226322.HMPREF1545_03842	69.7	0.0000000000045	DNA-packaging protein gp3	N/A
Pfam	UHGV-2099896_54	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-2099896_54	PF16677	N/A	N/A	N/A	N/A