UHGV-2100387 (vOTU-002891)

Viral Genome: UHGV-2100387

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2100387
vOTU ID	vOTU-002891
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029578\|Ga0245007_100518
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9826
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	50.22
Jumbo phage	No

Genome content
Genome length (bp)	43,958
GC content	54.85%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	67
CDS density	89%
Average CDS length (bps)	581.10
Total tRNA genes	5
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2100387_3	phrog_5	50.5	0.000000000000052	tail completion or Neck1 protein	connector
UniRef90	UHGV-2100387_3	UniRef90_A0A6N7TNP6	298.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-2100387_3	1123309.AQYB01000018_gene814	92.4	5.62e-22	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-2100387_3	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-2100387_3	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-2100387_3	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-2100387_5	phrog_8680	206.8	0	N/A	unknown function
UniRef90	UHGV-2100387_5	UniRef90_A0A6N7TNE8	439.0	0	N/A	N/A
eggNOG-mapper	UHGV-2100387_5	1423790.BN53_04265	173.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-2100387_5	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-2100387_5	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-2100387_5	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-2100387_7	phrog_2468	83.7	1.8e-24	head morphogenesis	head and packaging
UniRef90	UHGV-2100387_7	UniRef90_A0A6N7TLR7	637.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-2100387_7	386415.NT01CX_2177	97.8	7.83e-20	Phage Mu protein F like protein	N/A
Pfam	UHGV-2100387_7	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-2100387_7	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2100387_7	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-2100387_8	phrog_64	120.9	5.4e-36	portal protein	head and packaging
UniRef90	UHGV-2100387_8	UniRef90_A0A6N7TNT3	815.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-2100387_8	1042156.CXIVA_01850	82.8	0.0000000000000453	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-2100387_8	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-2100387_8	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-2100387_9	K06909	143.6	1.80067e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2100387_9	phrog_10250	173.5	0	N/A	unknown function
UniRef90	UHGV-2100387_9	UniRef90_A0A844D8I4	837.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2100387_9	411490.ANACAC_00783	493.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-2100387_9	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-2100387_9	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-2100387_9	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2100387_9	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2100387_9	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-2100387_10	UniRef90_UPI0018CC2891	117.0	1.47e-30	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2100387_10	1226322.HMPREF1545_00042	109.0	2.42e-28	N/A	N/A
structural_annotation	UHGV-2100387_10	PF04218	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2100387_12	PF07374,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-2100387_14	K01160	58.8	1.7e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-2100387_14	phrog_34	58.4	1.5e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2100387_14	UniRef90_A0A6N7TND6	216.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-2100387_14	875454.BAEW01000002_gene491	135.0	2.37e-39	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-2100387_14	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-2100387_14	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-2100387_14	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-2100387_15	phrog_424	91.6	7.8e-27	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-2100387_15	445972.ANACOL_01819	444.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-2100387_15	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-2100387_15	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2100387_17	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-2100387_18	K02086	63.7	2.3e-18	dnaD; DNA replication protein	N/A
PHROG	UHGV-2100387_18	phrog_186	71.6	1.4e-20	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2100387_18	UniRef90_A0A6N7TLH4	432.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-2100387_18	877411.JMMA01000002_gene2052	58.5	0.000000317	N/A	N/A
Pfam	UHGV-2100387_18	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-2100387_18	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-2100387_18	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
structural_annotation	UHGV-2100387_18	PF19808,PF07261,TIGR01446,COG3935	N/A	N/A	N/A	N/A
UniRef90	UHGV-2100387_19	UniRef90_UPI001CBB85F6	119.0	6.67e-31	single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2100387_19	PF00436,MF_00720,NF004512,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-2100387_20	phrog_2760	185.8	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2100387_20	UniRef90_A0A3A6EAW6	438.0	0	Phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-2100387_20	1235794.C811_01355	156.0	3.05483e-43	RecT family	N/A
Pfam	UHGV-2100387_20	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-2100387_20	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-2100387_20	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-2100387_20	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-2100387_21	phrog_674	143.0	2.10055e-42	N/A	unknown function
UniRef90	UHGV-2100387_21	UniRef90_A0A3A6E846	468.0	0	N/A	N/A
eggNOG-mapper	UHGV-2100387_21	556268.OFAG_00840	85.1	2.68e-16	N/A	N/A
Pfam	UHGV-2100387_21	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-2100387_21	PF07083	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2100387_22	PF14120	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2100387_23	PF09537	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2100387_24	PF12270,NF040944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2100387_25	PF10743,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-2100387_26	phrog_4433	158.4	0	N/A	unknown function
eggNOG-mapper	UHGV-2100387_26	394503.Ccel_3068	106.0	1.96e-25	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-2100387_26	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-2100387_26	PF12120,NF007410	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2100387_28	1121865.OMW_01950	69.7	0.0000000000000107	N/A	N/A
structural_annotation	UHGV-2100387_28	PF17516,NF007197	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2100387_29	760568.Desku_0919	96.7	5.19e-22	N/A	N/A
structural_annotation	UHGV-2100387_29	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
KOfam	UHGV-2100387_30	K07741	138.0	1.50001e-40	antB; anti-repressor protein	N/A
PHROG	UHGV-2100387_30	phrog_63	112.2	5.7e-33	anti-repressor Ant	transcription regulation
UniRef90	UHGV-2100387_30	UniRef90_A0A6N7TLD1	267.0	0	Phage antirepressor Ant	N/A
eggNOG-mapper	UHGV-2100387_30	1230342.CTM_16892	216.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-2100387_30	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-2100387_30	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-2100387_30	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-2100387_30	PF03374,PF08346,TIGR02681,COG3561,COG3645	N/A	N/A	N/A	N/A
UniRef90	UHGV-2100387_31	UniRef90_UPI0018995761	75.9	8.19e-17	helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-2100387_31	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-2100387_32	phrog_8	43.9	0.0000000000051	transcriptional regulator	transcription regulation
UniRef90	UHGV-2100387_32	UniRef90_A0A8J6IPF5	67.8	0.0000000000043	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-2100387_32	1378168.N510_01712	68.6	0.00000000000195	N/A	N/A
structural_annotation	UHGV-2100387_32	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-2100387_35	UniRef90_A0A5A5U028	86.7	4.21e-18	SAP domain-containing protein	N/A
eggNOG-mapper	UHGV-2100387_35	1280696.ATVY01000034_gene3237	99.8	6.98e-23	Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation	N/A
Pfam	UHGV-2100387_35	PF08461	N/A	N/A	Ribonuclease R winged-helix domain	HTH_12
UniRef90	UHGV-2100387_37	UniRef90_A0A6N7TLT0	336.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2100387_37	266265.Bxe_A3948	52.4	0.000000941	Helix-turn-helix domain	N/A
Pfam	UHGV-2100387_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2100387_37	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2100387_37	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-2100387_38	K14059	140.4	2.09999e-41	int; integrase	N/A
PHROG	UHGV-2100387_38	phrog_1	162.9	0	integrase	integration and excision
UniRef90	UHGV-2100387_38	UniRef90_A0A6N7TNQ4	737.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-2100387_38	411471.SUBVAR_05137	260.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2100387_38	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2100387_38	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-2100387_38	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2100387_40	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-2100387_41	phrog_20016	207.8	0	N/A	unknown function
UniRef90	UHGV-2100387_41	UniRef90_A0A285PT46	216.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-2100387_41	1226322.HMPREF1545_00077	186.0	0	N/A	N/A
structural_annotation	UHGV-2100387_41	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-2100387_42	phrog_16490	150.0	1.26117e-44	N/A	unknown function
eggNOG-mapper	UHGV-2100387_42	1408437.JNJN01000043_gene803	141.0	2.38e-38	N/A	N/A
PHROG	UHGV-2100387_43	phrog_22984	74.0	1e-21	N/A	unknown function
PHROG	UHGV-2100387_44	phrog_21718	122.7	2.4e-36	N/A	unknown function
eggNOG-mapper	UHGV-2100387_44	397290.C810_05210	98.6	5.95e-24	N/A	N/A
PHROG	UHGV-2100387_45	phrog_3754	94.6	1e-27	N/A	unknown function
eggNOG-mapper	UHGV-2100387_45	1235790.C805_00054	115.0	1.97e-31	N/A	N/A
eggNOG-mapper	UHGV-2100387_47	1235798.C817_04600	57.0	0.00000000443	N/A	N/A
structural_annotation	UHGV-2100387_47	PF13560,NF040522	N/A	N/A	N/A	N/A
PHROG	UHGV-2100387_48	phrog_99	55.4	9.5e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2100387_48	UniRef90_A0A4R2JE55	94.4	5.35e-19	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-2100387_48	742740.HMPREF9474_00071	87.4	5.38e-18	N/A	N/A
Pfam	UHGV-2100387_48	PF00847	N/A	N/A	AP2 domain	AP2
structural_annotation	UHGV-2100387_48	PF18337,PF00847	N/A	N/A	N/A	N/A
KOfam	UHGV-2100387_51	K24213	76.4	2.5e-22	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-2100387_51	phrog_5073	100.8	1.7e-29	tail fiber protein	tail
eggNOG-mapper	UHGV-2100387_51	411483.FAEPRAA2165_00757	171.0	2.8026e-45	N/A	N/A
Pfam	UHGV-2100387_51	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-2100387_52	phrog_15303	122.6	1.4e-36	N/A	unknown function
KOfam	UHGV-2100387_54	K07273	169.5	0	acm; lysozyme	N/A
PHROG	UHGV-2100387_54	phrog_291	126.5	2.4e-37	endolysin	lysis
UniRef90	UHGV-2100387_54	UniRef90_A0A564U0D3	342.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-2100387_54	718252.FP2_04890	217.0	0	hydrolase, family 25	N/A
Pfam	UHGV-2100387_54	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-2100387_54	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-2100387_54	PF01183,TIGR04053,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-2100387_55	phrog_2310	59.3	3.6e-17	N/A	unknown function
eggNOG-mapper	UHGV-2100387_56	657322.FPR_13530	65.1	0.0000000113	domain, Protein	N/A
COG	UHGV-2100387_56	COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-2100387_57	phrog_3558	220.0	0	tail protein	tail
UniRef90	UHGV-2100387_57	UniRef90_UPI001C01D15B	160.0	1.5e-38	phage tail protein	N/A
eggNOG-mapper	UHGV-2100387_57	1235799.C818_04233	102.0	3e-20	Prophage endopeptidase tail	N/A
Pfam	UHGV-2100387_57	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-2100387_57	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-2100387_57	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-2100387_58	phrog_33	44.2	0.0000000000037	distal tail protein Dit	tail
UniRef90	UHGV-2100387_58	UniRef90_A0A417QGC1	124.0	2.47e-31	MtfA protein	N/A
eggNOG-mapper	UHGV-2100387_58	1235792.C808_00094	114.0	7.88e-28	phage tail	N/A
COG	UHGV-2100387_58	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-2100387_58	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-2100387_59	phrog_9959	101.1	6.6e-30	tail length tape measure protein	tail
UniRef90	UHGV-2100387_59	UniRef90_A0A6N7TLD3	1023.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-2100387_59	411470.RUMGNA_02228	130.0	1.32e-28	tape measure	N/A
Pfam	UHGV-2100387_59	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-2100387_59	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-2100387_59	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-2100387_59	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-2100387_62	phrog_885	66.2	4.2e-19	major tail protein	tail
eggNOG-mapper	UHGV-2100387_62	1111121.HMPREF1247_0789	160.0	0	N/A	N/A
structural_annotation	UHGV-2100387_62	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2100387_63	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-2100387_64	phrog_17977	44.8	0.0000000000018	N/A	unknown function
UniRef90	UHGV-2100387_64	UniRef90_A0A844DHJ8	126.0	3e-35	Phage head closure protein	N/A
structural_annotation	UHGV-2100387_64	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2100387_66	phrog_247	209.7	0	major head protein	head and packaging
UniRef90	UHGV-2100387_66	UniRef90_UPI001BA5448B	256.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-2100387_66	33035.JPJF01000106_gene3132	375.0	0	N/A	N/A
Pfam	UHGV-2100387_66	PF20036	N/A	N/A	Major capsid protein 13-like	Gp13-like
structural_annotation	UHGV-2100387_66	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A