UHGV-2100710 (vOTU-072981)

Viral Genome: UHGV-2100710

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2100710
vOTU ID	vOTU-072981
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029572\|Ga0244925_100490\|provirus_31006_45449
Associated BioSample	SAMEA3708769
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	3
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9743
Virus hallmark genes (geNomad)	1
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	14.59
Jumbo phage	No

Genome content
Genome length (bp)	14,444
GC content	51.29%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	27
CDS density	92%
Average CDS length (bps)	493.11
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-2100710_1	UniRef90_A0A417NGQ8	499.0	0	PBECR4 domain-containing protein	N/A
eggNOG-mapper	UHGV-2100710_1	1235798.C817_01564	90.9	1.78e-19	N/A	N/A
Pfam	UHGV-2100710_1	PF18813	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4	PBECR4
PHROG	UHGV-2100710_3	phrog_13890	66.8	2.2e-19	N/A	unknown function
UniRef90	UHGV-2100710_3	UniRef90_A0A417NGM5	104.0	5.85e-28	Arc family DNA-binding protein	N/A
eggNOG-mapper	UHGV-2100710_3	742738.HMPREF9460_00716	89.0	1.17e-22	N/A	N/A
Pfam	UHGV-2100710_3	PF03869	N/A	N/A	Arc-like DNA binding domain	Arc
structural_annotation	UHGV-2100710_6	NF041070	N/A	N/A	N/A	N/A
PHROG	UHGV-2100710_9	phrog_1535	82.2	1.6e-37	tail length tape measure protein	tail
eggNOG-mapper	UHGV-2100710_9	693746.OBV_18190	132.0	8.07e-29	domain protein	N/A
COG	UHGV-2100710_9	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2100710_9	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-2100710_10	phrog_706	119.8	2e-35	N/A	unknown function
UniRef90	UHGV-2100710_10	UniRef90_UPI001D069FB9	214.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2100710_10	693746.OBV_18170	196.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2100710_10	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2100710_10	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2100710_11	phrog_11299	74.8	1.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-2100710_11	693746.OBV_18160	169.0	0	N/A	N/A
structural_annotation	UHGV-2100710_11	PF10666	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2100710_16	1009370.ALO_17461	66.2	0.00000000000286	N/A	N/A
KOfam	UHGV-2100710_17	K03091	41.2	0.000000000029	sigH; RNA polymerase sporulation-specific sigma factor	N/A
UniRef90	UHGV-2100710_17	UniRef90_A0A1I5LBW4	145.0	2.19001e-40	RNA polymerase sigma factor, sigma-70 family	N/A
eggNOG-mapper	UHGV-2100710_17	720554.Clocl_0693	54.3	0.00000384	Sigma-70, region 4	N/A
COG	UHGV-2100710_17	COG0568	N/A	N/A	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	N/A
structural_annotation	UHGV-2100710_17	PF07638,MF_00959,NF006147,COG0568	N/A	N/A	N/A	N/A
KOfam	UHGV-2100710_21	K02314	294.6	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-2100710_21	phrog_19	236.0	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2100710_21	UniRef90_UPI001C111256	665.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-2100710_21	1121020.JIAG01000005_gene2356	191.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-2100710_21	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-2100710_21	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-2100710_21	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-2100710_21	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-2100710_22	phrog_2514	75.7	4.5e-22	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2100710_22	UniRef90_A0A4Z0JMB2	80.9	0.0000000000000141	DNA replication protein DnaD	N/A
eggNOG-mapper	UHGV-2100710_22	1423775.BAMN01000006_gene1070	72.0	0.00000000000452	Replication initiation and membrane attachment	N/A
COG	UHGV-2100710_22	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
UniRef90	UHGV-2100710_23	UniRef90_R5S0R2	106.0	4.69e-29	Excisionase family DNA binding domain-containing protein	N/A
Pfam	UHGV-2100710_23	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-2100710_23	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-2100710_23	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-2100710_24	phrog_17740	44.1	0.0000000000027	N/A	unknown function
eggNOG-mapper	UHGV-2100710_24	198467.NP92_14535	50.8	0.0000000795	N/A	N/A
structural_annotation	UHGV-2100710_24	PF13560,COG3423	N/A	N/A	N/A	N/A
UniRef90	UHGV-2100710_25	UniRef90_A0A350H4E6	57.8	0.00000218	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2100710_25	742738.HMPREF9460_01397	61.2	0.0000000188	N/A	N/A
KOfam	UHGV-2100710_26	K14059	324.1	0	int; integrase	N/A
PHROG	UHGV-2100710_26	phrog_1	240.1	0	integrase	integration and excision
UniRef90	UHGV-2100710_26	UniRef90_UPI001F33A9B4	560.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-2100710_26	877414.ATWA01000018_gene2094	344.0	0	Phage integrase family	N/A
Pfam	UHGV-2100710_26	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-2100710_26	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2100710_26	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2100710_26	PF00589,PF02920,PF14659,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A