UHGV-2105024 (vOTU-067616)

Viral Genome: UHGV-2105024

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2105024
vOTU ID	vOTU-067616
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029576\|Ga0245100_100599
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9804
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	35.6
Jumbo phage	No

Genome content
Genome length (bp)	38,558
GC content	57.97%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	71
CDS density	93%
Average CDS length (bps)	505.06
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2105024_4	K00390	107.9	1e-31	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-2105024_4	phrog_424	119.2	2.8e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2105024_4	UniRef90_UPI001D087498	431.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-2105024_4	1408437.JNJN01000032_gene2312	330.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-2105024_4	BrxP_00001	65.4	2.3e-19	BrxP	BREX
Pfam	UHGV-2105024_4	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-2105024_4	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-2105024_4	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-2105024_6	phrog_1384	121.2	7.9e-36	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-2105024_6	665956.HMPREF1032_03086	282.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-2105024_6	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
PHROG	UHGV-2105024_7	phrog_3136	134.5	3.60001e-40	N/A	unknown function
UniRef90	UHGV-2105024_7	UniRef90_A0A843GST0	94.7	4.42e-21	ASCH domain-containing protein	N/A
COG	UHGV-2105024_7	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-2105024_7	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-2105024_8	phrog_5781	82.3	6.1e-24	N/A	unknown function
UniRef90	UHGV-2105024_8	UniRef90_A0A2V2FSM6	117.0	4.58e-32	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-2105024_8	573061.Clocel_3558	92.4	3.77e-23	N/A	N/A
Pfam	UHGV-2105024_8	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-2105024_8	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-2105024_8	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2105024_9	1232443.BAIA02000078_gene48	57.4	0.0000000103	N/A	N/A
PHROG	UHGV-2105024_12	phrog_190	99.4	3.7e-29	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2105024_12	UniRef90_UPI0006C2AC63	133.0	3.49e-37	N/A	N/A
eggNOG-mapper	UHGV-2105024_12	1226322.HMPREF1545_00295	117.0	2.86e-31	N/A	N/A
Pfam	UHGV-2105024_12	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-2105024_12	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-2105024_14	phrog_374	56.8	4.7e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2105024_14	1423807.BACO01000037_gene1103	68.2	0.00000000000166	N/A	N/A
PHROG	UHGV-2105024_16	phrog_2245	85.4	6.2e-25	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-2105024_16	UniRef90_A0A4U9RLZ8	66.2	0.0000000000302	N/A	N/A
eggNOG-mapper	UHGV-2105024_16	428125.CLOLEP_01814	65.1	0.0000000000411	COG NOG14118 non supervised orthologous group	N/A
structural_annotation	UHGV-2105024_16	PF08271	N/A	N/A	N/A	N/A
PHROG	UHGV-2105024_17	phrog_21498	298.1	0	N/A	unknown function
eggNOG-mapper	UHGV-2105024_17	78346.BRUM_0376	259.0	0	DNA binding	N/A
COG	UHGV-2105024_17	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-2105024_17	PF05869,TIGR01712	N/A	N/A	N/A	N/A
PHROG	UHGV-2105024_18	phrog_3584	70.7	2e-20	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2105024_18	537013.CLOSTMETH_02141	62.8	0.0000000036	N/A	N/A
eggNOG-mapper	UHGV-2105024_19	1297617.JPJD01000059_gene2640	84.7	3.61e-19	N/A	N/A
structural_annotation	UHGV-2105024_19	PF06530,TIGR01636	N/A	N/A	N/A	N/A
UniRef90	UHGV-2105024_20	UniRef90_UPI001AE1B45B	99.0	6.63e-25	HNH endonuclease	N/A
eggNOG-mapper	UHGV-2105024_20	1111134.HMPREF1253_0388	86.7	4.76e-21	HNH nucleases	N/A
COG	UHGV-2105024_20	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-2105024_21	phrog_1066	128.4	2.7e-38	N/A	unknown function
eggNOG-mapper	UHGV-2105024_21	1382358.JHVN01000024_gene1703	125.0	2.37e-35	N/A	N/A
structural_annotation	UHGV-2105024_21	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-2105024_22	phrog_9	386.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-2105024_22	UniRef90_UPI001D07C789	792.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-2105024_22	1203606.HMPREF1526_00981	739.0	0	Terminase	N/A
Pfam	UHGV-2105024_22	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-2105024_22	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-2105024_22	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-2105024_22	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-2105024_23	phrog_12	177.9	0	portal protein	head and packaging
UniRef90	UHGV-2105024_23	UniRef90_C4GAS6	504.0	0	Putative phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-2105024_23	626523.GCWU000342_01027	504.0	0	Portal protein	N/A
Pfam	UHGV-2105024_23	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-2105024_23	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-2105024_23	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-2105024_24	K01358	132.5	4.9e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-2105024_24	phrog_94	197.2	0	head maturation protease	head and packaging
UniRef90	UHGV-2105024_24	UniRef90_UPI0018979DC8	201.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-2105024_24	1280689.AUJC01000011_gene1520	189.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-2105024_24	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-2105024_24	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-2105024_24	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-2105024_25	phrog_10	183.8	0	major head protein	head and packaging
UniRef90	UHGV-2105024_25	UniRef90_UPI00189AE5FE	404.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-2105024_25	1280689.AUJC01000011_gene1521	389.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-2105024_25	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-2105024_25	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-2105024_25	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-2105024_25	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2105024_26	phrog_5223	41.2	0.000000000022	neck protein	connector
UniRef90	UHGV-2105024_26	UniRef90_E6MGY0	52.4	0.000000997	Putative phage DNA packaging protein	N/A
eggNOG-mapper	UHGV-2105024_26	887929.HMP0721_1264	52.4	0.000000167	N/A	N/A
PHROG	UHGV-2105024_27	phrog_1951	75.0	6.9e-22	head-tail adaptor	connector
UniRef90	UHGV-2105024_27	UniRef90_A0A1F8UNT5	65.1	0.0000000000123	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-2105024_27	1094508.Tsac_2422	54.7	0.0000000285	Phage head-tail joining protein	N/A
Pfam	UHGV-2105024_27	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-2105024_27	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-2105024_27	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-2105024_27	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2105024_28	1487921.DP68_11350	55.5	0.0000000175	N/A	N/A
structural_annotation	UHGV-2105024_28	PF05657	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2105024_29	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-2105024_30	phrog_88	84.5	1.3e-24	major tail protein	tail
UniRef90	UHGV-2105024_30	UniRef90_S0FUN2	114.0	9.42e-29	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-2105024_30	1195236.CTER_5106	114.0	1.58e-29	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-2105024_30	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-2105024_30	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2105024_30	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-2105024_31	phrog_2115	40.3	0.000000000057	tail protein	tail
eggNOG-mapper	UHGV-2105024_31	1286171.EAL2_c05410	49.7	0.00000537	N/A	N/A
structural_annotation	UHGV-2105024_31	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-2105024_32	phrog_8462	114.4	8e-34	tail length tape measure protein	tail
UniRef90	UHGV-2105024_32	UniRef90_A0A1M6L1P7	171.0	1.62999e-41	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-2105024_32	1195236.CTER_5104	209.0	0	nuclear chromosome segregation	N/A
COG	UHGV-2105024_32	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-2105024_32	TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-2105024_33	phrog_37549	80.1	1.6e-23	virion structural protein	head and packaging
UniRef90	UHGV-2105024_33	UniRef90_A0A3D0W045	220.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-2105024_33	1195236.CTER_5103	125.0	5.57e-27	N/A	N/A
structural_annotation	UHGV-2105024_33	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2105024_34	phrog_26795	136.6	6.59998e-41	N/A	unknown function
eggNOG-mapper	UHGV-2105024_34	1195236.CTER_5102	153.0	2.08e-40	N/A	N/A
structural_annotation	UHGV-2105024_34	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2105024_35	PF18614,MF_00085,NF003076,COG0231	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2105024_37	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-2105024_39	phrog_10898	283.7	0	N/A	unknown function
UniRef90	UHGV-2105024_39	UniRef90_A0A7U3NJT3	190.0	0	Putative Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-2105024_39	717606.PaecuDRAFT_2136	69.7	0.0000000000618	S-layer homology domain	N/A
COG	UHGV-2105024_39	COG1520	N/A	N/A	Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat	N/A
structural_annotation	UHGV-2105024_39	PF19081,PF15418,MF_01905,NF032891,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-2105024_40	phrog_10898	41.4	0.000000000022	N/A	unknown function
structural_annotation	UHGV-2105024_40	PF16408,NF033510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2105024_41	1519439.JPJG01000060_gene1892	51.2	0.00000425	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-2105024_41	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
eggNOG-mapper	UHGV-2105024_42	742738.HMPREF9460_02534	59.7	0.000000207	N/A	N/A
Pfam	UHGV-2105024_42	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-2105024_42	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2105024_44	1519439.JPJG01000060_gene1895	58.2	0.0000000403	N/A	N/A
structural_annotation	UHGV-2105024_44	PF10618	N/A	N/A	N/A	N/A
PHROG	UHGV-2105024_46	phrog_937	46.0	0.00000000000079	hemolysin	other
PHROG	UHGV-2105024_47	phrog_443	56.8	6.8e-16	holin	lysis
UniRef90	UHGV-2105024_47	UniRef90_A0A4R1QPE5	91.7	4.38e-23	Phage r1t holin	N/A
eggNOG-mapper	UHGV-2105024_47	1469948.JPNB01000002_gene3855	91.7	7.34e-24	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-2105024_47	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-2105024_47	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-2105024_48	K01447	111.6	1e-32	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-2105024_48	phrog_1794	108.5	8.5e-32	amidase	lysis
UniRef90	UHGV-2105024_48	UniRef90_N1ZHY5	133.0	7.72e-35	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-2105024_48	97138.C820_00251	133.0	1.3e-35	Ami_2	N/A
Pfam	UHGV-2105024_48	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-2105024_48	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-2105024_48	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2105024_49	PF02001,MF_00674,COG1342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2105024_51	PF18812,COG2929	N/A	N/A	N/A	N/A
PHROG	UHGV-2105024_52	phrog_36767	44.4	0.0000000000024	N/A	unknown function
structural_annotation	UHGV-2105024_52	PF10049,COG5428	N/A	N/A	N/A	N/A
UniRef90	UHGV-2105024_56	UniRef90_A0A7M1RTM1	75.9	0.0000000000000501	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-2105024_56	1378168.N510_03079	70.9	0.00000000000166	N/A	N/A
KOfam	UHGV-2105024_57	K06400	246.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-2105024_57	phrog_95	261.8	0	integrase	integration and excision
UniRef90	UHGV-2105024_57	UniRef90_G9YSD9	416.0	0	Resolvase protein	N/A
eggNOG-mapper	UHGV-2105024_57	1121344.JHZO01000001_gene439	404.0	0	resolvase	N/A
Pfam	UHGV-2105024_57	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-2105024_57	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-2105024_57	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-2105024_57	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-2105024_57	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-2105024_58	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2105024_58	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-2105024_58	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-2105024_59	UniRef90_UPI001CB7843A	79.0	0.00000000000132	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-2105024_59	1348338.ADILRU_1828	72.8	0.0000000000297	TM2 domain	N/A
COG	UHGV-2105024_59	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-2105024_61	K22300	60.4	4e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2105024_61	phrog_8	57.6	2.8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-2105024_61	UniRef90_A0A1Y4H5B2	116.0	3.15e-31	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2105024_61	748224.HMPREF9436_01444	115.0	2.46e-31	N/A	N/A
PADLOC	UHGV-2105024_61	retron_type_VI_hth_cluster2_1	45.0	0.0000000000023	N/A	Retron
Pfam	UHGV-2105024_61	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2105024_61	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2105024_61	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2105024_64	COG2005	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2105024_66	642492.Clole_0961	68.9	0.0000000000000152	N/A	N/A
structural_annotation	UHGV-2105024_66	PF12286	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2105024_67	PF10548	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2105024_69	NF041247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2105024_70	PF05082	N/A	N/A	N/A	N/A