UHGV-2107720 (vOTU-059350)

Viral Genome: UHGV-2107720

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2107720
vOTU ID	vOTU-059350
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029527\|Ga0244938_100445
Associated BioSample	SAMEA3708782
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9812
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	33.85
Jumbo phage	No

Genome content
Genome length (bp)	42,096
GC content	55.15%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	77
CDS density	94%
Average CDS length (bps)	513.16
Total tRNA genes	3
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2107720_1	phrog_4433	132.1	4.4e-39	N/A	unknown function
UniRef90	UHGV-2107720_1	UniRef90_A0A6M5C839	96.7	4.75e-22	Putative ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-2107720_1	33035.JPJF01000122_gene2458	103.0	2.88e-24	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-2107720_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-2107720_1	NF000318	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2107720_4	1121865.OMW_01950	73.2	4.59e-16	N/A	N/A
structural_annotation	UHGV-2107720_4	PF17516,NF007197	N/A	N/A	N/A	N/A
PHROG	UHGV-2107720_5	phrog_463	216.1	0	anti-repressor	transcription regulation
UniRef90	UHGV-2107720_5	UniRef90_UPI00156FBCEE	281.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-2107720_5	411490.ANACAC_00813	228.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-2107720_5	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-2107720_5	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-2107720_5	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-2107720_5	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
KOfam	UHGV-2107720_9	K07729	41.9	0.000000000021	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-2107720_9	phrog_8	44.1	0.0000000000045	transcriptional regulator	transcription regulation
UniRef90	UHGV-2107720_9	UniRef90_UPI001C009F10	116.0	1.29e-32	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-2107720_9	1268072.PSAB_01325	52.8	0.000000026	Transcriptional regulator	N/A
Pfam	UHGV-2107720_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2107720_9	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-2107720_9	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2107720_10	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
Pfam	UHGV-2107720_11	PF09106	N/A	N/A	Elongation factor SelB, winged helix	SelB-wing_2
structural_annotation	UHGV-2107720_11	PF09202,MF_01819,NF041230,COG1321	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2107720_13	321955.AAGP01000017_gene2211	56.6	0.000000155	N/A	N/A
structural_annotation	UHGV-2107720_13	PF16900,NF040991	N/A	N/A	N/A	N/A
UniRef90	UHGV-2107720_16	UniRef90_A0A6N7TLT0	207.0	0	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-2107720_16	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-2107720_16	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-2107720_17	K14059	138.7	7.20001e-41	int; integrase	N/A
PHROG	UHGV-2107720_17	phrog_1	167.0	0	integrase	integration and excision
UniRef90	UHGV-2107720_17	UniRef90_A0A6N7TNQ4	712.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-2107720_17	411471.SUBVAR_05137	264.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2107720_17	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2107720_17	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-2107720_17	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2107720_19	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-2107720_20	phrog_20016	205.5	0	N/A	unknown function
UniRef90	UHGV-2107720_20	UniRef90_A0A285PT46	228.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-2107720_20	1226322.HMPREF1545_00077	188.0	0	N/A	N/A
structural_annotation	UHGV-2107720_20	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-2107720_21	phrog_16490	157.1	0	N/A	unknown function
eggNOG-mapper	UHGV-2107720_21	1408437.JNJN01000043_gene803	123.0	1.61e-31	N/A	N/A
PHROG	UHGV-2107720_22	phrog_22984	87.4	9.4e-26	N/A	unknown function
PHROG	UHGV-2107720_23	phrog_21718	115.3	4.6e-34	N/A	unknown function
eggNOG-mapper	UHGV-2107720_23	397290.C810_05210	96.7	3.34e-23	N/A	N/A
PHROG	UHGV-2107720_24	phrog_3754	92.2	5.1e-27	N/A	unknown function
eggNOG-mapper	UHGV-2107720_24	1485543.JMME01000025_gene2462	103.0	3.96e-27	N/A	N/A
eggNOG-mapper	UHGV-2107720_27	1304874.JAFY01000007_gene1737	77.0	0.0000000000000216	N/A	N/A
structural_annotation	UHGV-2107720_28	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-2107720_30	phrog_15303	77.0	2.1e-22	N/A	unknown function
KOfam	UHGV-2107720_32	K07273	171.6	0	acm; lysozyme	N/A
PHROG	UHGV-2107720_32	phrog_291	131.8	5.9e-39	endolysin	lysis
UniRef90	UHGV-2107720_32	UniRef90_A0A564U0D3	378.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-2107720_32	718252.FP2_04890	228.0	0	hydrolase, family 25	N/A
Pfam	UHGV-2107720_32	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-2107720_32	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-2107720_32	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
UniRef90	UHGV-2107720_33	UniRef90_A0A2J4JSG1	79.7	1.22e-18	XkdX family protein	N/A
eggNOG-mapper	UHGV-2107720_33	718252.FP2_16990	78.6	5.74e-19	Phage uncharacterised protein (Phage_XkdX)	N/A
structural_annotation	UHGV-2107720_33	PF09693	N/A	N/A	N/A	N/A
PHROG	UHGV-2107720_34	phrog_29248	46.4	0.00000000000064	N/A	unknown function
PHROG	UHGV-2107720_35	phrog_10993	139.5	1.20512e-43	Hoc-like head decoration	head and packaging
UniRef90	UHGV-2107720_35	UniRef90_A0A1Q6KPN8	210.0	0	N/A	N/A
eggNOG-mapper	UHGV-2107720_35	718252.FP2_16970	184.0	0	N/A	N/A
Pfam	UHGV-2107720_35	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-2107720_35	PF19789,PF18911	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2107720_37	1235792.C808_00094	90.5	7.25e-20	phage tail	N/A
COG	UHGV-2107720_37	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-2107720_37	PF05709,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-2107720_38	phrog_3558	274.7	0	tail protein	tail
UniRef90	UHGV-2107720_38	UniRef90_UPI001C01D15B	684.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-2107720_38	1120933.ATUY01000002_gene164	156.0	9.66e-38	Prophage endopeptidase tail	N/A
Pfam	UHGV-2107720_38	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-2107720_38	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-2107720_38	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-2107720_39	phrog_28775	139.2	1.29998e-41	tail length tape measure protein	tail
UniRef90	UHGV-2107720_39	UniRef90_A0A844DDD5	622.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-2107720_39	1492737.FEM08_12070	145.0	1.54e-33	tape measure	N/A
Pfam	UHGV-2107720_39	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-2107720_39	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-2107720_39	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-2107720_39	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-2107720_42	phrog_885	57.7	1.5e-16	major tail protein	tail
eggNOG-mapper	UHGV-2107720_42	1504822.CCNO01000012_gene492	98.6	4.91e-23	N/A	N/A
structural_annotation	UHGV-2107720_42	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2107720_43	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-2107720_44	phrog_17977	45.0	0.0000000000015	N/A	unknown function
UniRef90	UHGV-2107720_44	UniRef90_A0A844DHJ8	119.0	1.63e-32	Phage head closure protein	N/A
structural_annotation	UHGV-2107720_44	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2107720_46	phrog_247	203.6	0	major head protein	head and packaging
UniRef90	UHGV-2107720_46	UniRef90_UPI001BA5448B	241.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-2107720_46	33035.JPJF01000106_gene3132	362.0	0	N/A	N/A
Pfam	UHGV-2107720_46	PF20036	N/A	N/A	Major capsid protein 13-like	Gp13-like
structural_annotation	UHGV-2107720_46	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2107720_47	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2107720_50	phrog_5	48.6	0.0000000000002	tail completion or Neck1 protein	connector
UniRef90	UHGV-2107720_50	UniRef90_A0A6N7TNP6	295.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-2107720_50	929506.CbC4_1219	89.7	8.45e-21	N/A	N/A
Pfam	UHGV-2107720_50	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-2107720_50	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-2107720_52	phrog_8680	203.7	0	N/A	unknown function
UniRef90	UHGV-2107720_52	UniRef90_A0A844D688	450.0	0	N/A	N/A
eggNOG-mapper	UHGV-2107720_52	1423790.BN53_04265	180.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-2107720_52	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-2107720_52	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-2107720_52	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-2107720_55	phrog_2468	84.7	7.8e-25	head morphogenesis	head and packaging
UniRef90	UHGV-2107720_55	UniRef90_A0A6N7TLR7	602.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-2107720_55	1504822.CCNO01000013_gene286	120.0	4.14e-27	cell adhesion	N/A
Pfam	UHGV-2107720_55	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-2107720_55	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2107720_55	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2107720_56	PF08863,MF_01077	N/A	N/A	N/A	N/A
PHROG	UHGV-2107720_57	phrog_64	120.4	6.5e-36	portal protein	head and packaging
UniRef90	UHGV-2107720_57	UniRef90_A0A6N7TNT3	890.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-2107720_57	642492.Clole_2764	78.6	0.000000000000972	phage portal protein, SPP1	N/A
Pfam	UHGV-2107720_57	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-2107720_57	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-2107720_58	K06909	143.4	2.10055e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2107720_58	phrog_10250	177.2	0	N/A	unknown function
UniRef90	UHGV-2107720_58	UniRef90_A0A844D8I4	833.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2107720_58	411490.ANACAC_00783	491.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-2107720_58	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-2107720_58	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-2107720_58	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2107720_58	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2107720_58	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-2107720_59	UniRef90_UPI0018CC2891	118.0	7.83e-31	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2107720_59	1226322.HMPREF1545_00042	111.0	6.36e-29	N/A	N/A
structural_annotation	UHGV-2107720_59	PF04218	N/A	N/A	N/A	N/A
PHROG	UHGV-2107720_60	phrog_36	55.5	0.0000000000000011	transcriptional regulator	transcription regulation
structural_annotation	UHGV-2107720_60	PF07374,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-2107720_62	K01160	58.6	2e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-2107720_62	phrog_34	56.9	4.8e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2107720_62	UniRef90_A0A6N7TND6	207.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-2107720_62	875454.BAEW01000002_gene491	132.0	2.75e-38	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-2107720_62	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-2107720_62	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-2107720_62	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-2107720_63	phrog_757	194.5	0	DNA methyltransferase	other
UniRef90	UHGV-2107720_63	UniRef90_A0A355KVL2	367.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-2107720_63	748224.HMPREF9436_03069	398.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-2107720_63	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-2107720_63	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-2107720_65	phrog_111	168.4	0	DNA methyltransferase	other
UniRef90	UHGV-2107720_65	UniRef90_UPI00130E351D	286.0	0	adenine methyltransferase	N/A
eggNOG-mapper	UHGV-2107720_65	1567011.A0A0A7RUD1_9VIRU	194.0	0	DNA N-6-adenine-methyltransferase (Dam)	N/A
PADLOC	UHGV-2107720_65	oMTase_00015	205.9	0	orphan methyltransferase	RM
Pfam	UHGV-2107720_65	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-2107720_65	PF05869,MF_03187,TIGR01712,COG2263	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2107720_66	PF01775,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2107720_67	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-2107720_68	K02086	66.4	3.7e-19	dnaD; DNA replication protein	N/A
PHROG	UHGV-2107720_68	phrog_186	72.6	5.2e-21	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2107720_68	UniRef90_A0A6N7TLH4	258.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-2107720_68	877411.JMMA01000002_gene2292	69.3	0.0000000000541	N/A	N/A
Pfam	UHGV-2107720_68	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-2107720_68	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-2107720_68	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
structural_annotation	UHGV-2107720_68	PF19808,PF07261,TIGR01446,COG3935	N/A	N/A	N/A	N/A
KOfam	UHGV-2107720_69	K03111	142.3	5.4006e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-2107720_69	phrog_44	141.6	3.59994e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2107720_69	UniRef90_D4K451	266.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-2107720_69	718252.FP2_06770	266.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-2107720_69	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-2107720_69	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-2107720_69	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-2107720_69	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2107720_69	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-2107720_70	phrog_561	112.9	3e-33	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2107720_70	UniRef90_UPI0011C8A287	152.0	1.20932e-42	recombinase RecT	N/A
eggNOG-mapper	UHGV-2107720_70	33035.JPJF01000071_gene4462	150.0	8.61799e-43	N/A	N/A
structural_annotation	UHGV-2107720_70	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2107720_72	PF06718	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2107720_76	PF10743,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-2107720_77	phrog_27197	89.1	3.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-2107720_77	394503.Ccel_3068	60.1	0.00000000116	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-2107720_77	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-2107720_77	NF007410	N/A	N/A	N/A	N/A