UHGV-2111437 (vOTU-158007)

Viral Genome: UHGV-2111437

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2111437
vOTU ID	vOTU-158007
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029579\|Ga0244893_101324
Associated BioSample	SAMEA3708737
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	50.86 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	7
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9784
Virus hallmark genes (geNomad)	2
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	19.1
Jumbo phage	No

Genome content
Genome length (bp)	21,479
GC content	55.24%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	44
CDS density	89%
Average CDS length (bps)	434.11
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 50.86)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2111437_5	phrog_1129	66.5	2.8e-19	holin	lysis
UniRef90	UHGV-2111437_5	UniRef90_A0A1C7FPV3	122.0	1.94e-34	Enolase	N/A
eggNOG-mapper	UHGV-2111437_5	1226322.HMPREF1545_00069	139.0	4.7504e-42	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-2111437_5	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-2111437_5	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-2111437_6	K08640	96.2	4e-28	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-2111437_6	phrog_18955	250.1	0	N/A	unknown function
UniRef90	UHGV-2111437_6	UniRef90_UPI001C1061EB	505.0	0	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-2111437_6	1235797.C816_04171	489.0	0	Peptidase M15	N/A
Pfam	UHGV-2111437_6	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
Pfam	UHGV-2111437_6	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-2111437_6	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2111437_6	PF09992,PF08291,COG4632,COG3108	N/A	N/A	N/A	N/A
UniRef90	UHGV-2111437_7	UniRef90_A0A8D9PDQ3	76.3	1.46e-16	ECF sigma factor	N/A
structural_annotation	UHGV-2111437_7	PF04545,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-2111437_8	phrog_374	70.7	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2111437_8	UniRef90_A0A2G2M2K8	216.0	0	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-2111437_8	887929.HMP0721_2409	139.0	1.68e-37	N/A	N/A
structural_annotation	UHGV-2111437_8	PF18337,PF00847	N/A	N/A	N/A	N/A
PHROG	UHGV-2111437_9	phrog_25567	56.8	2.8e-16	N/A	unknown function
UniRef90	UHGV-2111437_9	UniRef90_UPI00164AED9E	121.0	1.37e-33	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2111437_9	1235798.C817_04600	77.0	8.73e-17	N/A	N/A
structural_annotation	UHGV-2111437_9	NF040522,COG2944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2111437_11	COG4451	N/A	N/A	N/A	N/A
PHROG	UHGV-2111437_13	phrog_3754	109.6	2.3e-32	N/A	unknown function
eggNOG-mapper	UHGV-2111437_13	1226322.HMPREF1545_00073	158.0	0	N/A	N/A
PHROG	UHGV-2111437_14	phrog_21718	110.0	1.8e-32	N/A	unknown function
eggNOG-mapper	UHGV-2111437_14	397290.C810_05210	66.6	0.0000000000108	N/A	N/A
PHROG	UHGV-2111437_15	phrog_22984	72.3	4.3e-21	N/A	unknown function
PHROG	UHGV-2111437_16	phrog_16490	146.0	3.09687e-43	N/A	unknown function
eggNOG-mapper	UHGV-2111437_16	1408437.JNJN01000043_gene803	173.0	0	N/A	N/A
PHROG	UHGV-2111437_17	phrog_20016	178.9	0	N/A	unknown function
UniRef90	UHGV-2111437_17	UniRef90_A0A285PT46	193.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-2111437_17	397290.C810_05214	159.0	0	N/A	N/A
structural_annotation	UHGV-2111437_17	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-2111437_18	phrog_28802	48.8	0.00000000000011	N/A	unknown function
structural_annotation	UHGV-2111437_18	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2111437_19	1232443.BAIA02000078_gene6	67.0	0.00000000000106	N/A	N/A
KOfam	UHGV-2111437_20	K14059	214.2	0	int; integrase	N/A
PHROG	UHGV-2111437_20	phrog_1	184.4	0	integrase	integration and excision
UniRef90	UHGV-2111437_20	UniRef90_UPI001C124E9B	489.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-2111437_20	1226322.HMPREF1545_00144	330.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2111437_20	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-2111437_20	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2111437_20	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2111437_20	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-2111437_21	UniRef90_A0A8D9UHA6	77.4	0.00000000000000591	Helix-turn-helix XRE-family like protein	N/A
Pfam	UHGV-2111437_21	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-2111437_21	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2111437_23	COG1321	N/A	N/A	N/A	N/A
UniRef90	UHGV-2111437_24	UniRef90_A0A3D3Y0G5	95.5	2.78e-22	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-2111437_24	NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-2111437_25	phrog_4611	45.6	0.00000000000041	minor head protein	head and packaging
UniRef90	UHGV-2111437_25	UniRef90_UPI001EDCCFB6	107.0	7.15e-23	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-2111437_25	411902.CLOBOL_02557	155.0	3.49063e-42	N/A	N/A
structural_annotation	UHGV-2111437_25	PF06152	N/A	N/A	N/A	N/A
KOfam	UHGV-2111437_26	K22300	50.8	0.00000000000003	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2111437_26	phrog_8	46.1	0.00000000000072	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-2111437_26	1536772.R70723_32050	53.5	0.000000603	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-2111437_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2111437_26	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-2111437_28	PF13560,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-2111437_31	phrog_757	242.6	0	DNA methyltransferase	other
UniRef90	UHGV-2111437_31	UniRef90_A0A661TK95	236.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-2111437_31	485918.Cpin_3834	236.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-2111437_31	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-2111437_31	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2111437_33	760568.Desku_0919	110.0	2.28e-27	N/A	N/A
structural_annotation	UHGV-2111437_33	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
PHROG	UHGV-2111437_34	phrog_253	82.8	4.3e-24	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2111437_34	UniRef90_A0A1C5N4H2	121.0	5.72e-32	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-2111437_34	748224.HMPREF9436_03356	99.0	4.95e-24	Siphovirus Gp157	N/A
Pfam	UHGV-2111437_34	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-2111437_34	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-2111437_35	phrog_155	124.1	1.2e-36	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2111437_35	UniRef90_A0A3D4KYY8	212.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-2111437_35	1304866.K413DRAFT_1196	193.0	0	ERF superfamily	N/A
Pfam	UHGV-2111437_35	PF04404	N/A	N/A	ERF superfamily	ERF
COG	UHGV-2111437_35	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2111437_35	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-2111437_36	phrog_72	60.5	2.3e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2111437_36	UniRef90_A0A8D9PDS2	174.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-2111437_36	445972.ANACOL_01825	168.0	0	N/A	N/A
structural_annotation	UHGV-2111437_36	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-2111437_37	phrog_7370	65.5	6.6e-19	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2111437_37	UniRef90_R5XZW2	122.0	4.63e-34	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-2111437_37	1235800.C819_02254	63.5	0.0000000000173	HNH nucleases	N/A
Pfam	UHGV-2111437_37	PF01844	N/A	N/A	HNH endonuclease	HNH
KOfam	UHGV-2111437_38	K03111	149.4	3.36312e-44	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-2111437_38	phrog_44	150.3	9.80909e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2111437_38	UniRef90_UPI0002EC42B8	207.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-2111437_38	1007096.BAGW01000023_gene151	207.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-2111437_38	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-2111437_38	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-2111437_38	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-2111437_38	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2111437_38	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-2111437_39	phrog_2149	69.5	3.4e-20	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2111437_39	742740.HMPREF9474_03117	184.0	0	N/A	N/A
structural_annotation	UHGV-2111437_39	PF01978,NF000243,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-2111437_40	K02315	119.5	3.2e-35	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-2111437_40	phrog_50	111.8	6.7e-33	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2111437_40	UniRef90_A0A810Q3X8	358.0	0	IstB_IS21 domain-containing protein	N/A
eggNOG-mapper	UHGV-2111437_40	445972.ANACOL_01829	192.0	0	N/A	N/A
Pfam	UHGV-2111437_40	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-2111437_40	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-2111437_40	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-2111437_42	phrog_474	102.3	6.6e-30	phosphofructokinase	other
UniRef90	UHGV-2111437_42	UniRef90_A0A2V2EHL9	147.0	2.24208e-44	N/A	N/A
eggNOG-mapper	UHGV-2111437_42	1203606.HMPREF1526_00237	97.1	5.7e-25	N/A	N/A
Pfam	UHGV-2111437_42	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-2111437_42	PF19905	N/A	N/A	N/A	N/A