UHGV-2112750 (vOTU-026866)

Viral Genome: UHGV-2112750

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2112750
vOTU ID	vOTU-026866
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029551\|Ga0245011_101103
Associated BioSample	SAMEA3708855
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	60.76 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9786
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	33.18
Jumbo phage	No

Genome content
Genome length (bp)	24,277
GC content	44.49%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	30
CDS density	92%
Average CDS length (bps)	744.90
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 60.76)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2112750_1	K06334	239.2	0	cotJC; spore coat protein JC	N/A
PHROG	UHGV-2112750_1	phrog_7573	191.6	0	N/A	unknown function
UniRef90	UHGV-2112750_1	UniRef90_A0A174N4Q5	308.0	0	Manganese containing catalase	N/A
eggNOG-mapper	UHGV-2112750_1	457421.CBFG_01877	309.0	0	Manganese containing catalase	N/A
Pfam	UHGV-2112750_1	PF05067	N/A	N/A	Manganese containing catalase	Mn_catalase
COG	UHGV-2112750_1	COG3546	N/A	N/A	Mn-containing catalase (includes spore coat protein CotJC)	N/A
structural_annotation	UHGV-2112750_1	PF05067,MF_00931,TIGR04535,COG3546	N/A	N/A	N/A	N/A
KOfam	UHGV-2112750_2	K01185	126.5	3.2e-37	E3.2.1.17; lysozyme [EC:3.2.1.17]	N/A
PHROG	UHGV-2112750_2	phrog_7	179.0	0	endolysin	lysis
UniRef90	UHGV-2112750_2	UniRef90_R5IS13	375.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-2112750_2	397291.C804_01109	125.0	2.14e-30	Phage lysozyme	N/A
Pfam	UHGV-2112750_2	PF00959	N/A	N/A	Phage lysozyme	Phage_lysozyme
Pfam	UHGV-2112750_2	PF19085	N/A	N/A	Choline-binding repeat	Choline_bind_2
Pfam	UHGV-2112750_2	PF01473	N/A	N/A	Putative cell wall binding repeat	Choline_bind_1
COG	UHGV-2112750_2	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
HAMAP	UHGV-2112750_2	MF_04110	N/A	N/A	Endolysin	N/A
structural_annotation	UHGV-2112750_2	PF19127,MF_04110,TIGR04035,COG3772	N/A	N/A	N/A	N/A
PHROG	UHGV-2112750_3	phrog_1129	78.0	7.6e-23	holin	lysis
UniRef90	UHGV-2112750_3	UniRef90_A0A3R6U6I1	155.0	0	Enolase	N/A
eggNOG-mapper	UHGV-2112750_3	1321782.HMPREF1986_00360	109.0	2.28e-30	N/A	N/A
Pfam	UHGV-2112750_3	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-2112750_3	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-2112750_4	phrog_4105	68.5	8.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-2112750_4	1321782.HMPREF1986_02281	133.0	1.34e-38	N/A	N/A
PHROG	UHGV-2112750_5	phrog_20274	143.2	1.10002e-42	N/A	unknown function
UniRef90	UHGV-2112750_5	UniRef90_D7GNX6	243.0	0	Predicted membrane protein	N/A
eggNOG-mapper	UHGV-2112750_5	411902.CLOBOL_05645	207.0	0	N/A	N/A
Pfam	UHGV-2112750_5	PF06541	N/A	N/A	Putative ABC-transporter type IV	ABC_trans_CmpB
COG	UHGV-2112750_5	COG4905	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2112750_5	PF06541,COG4905	N/A	N/A	N/A	N/A
PHROG	UHGV-2112750_6	phrog_1348	40.2	0.000000000044	tail fiber protein	tail
UniRef90	UHGV-2112750_6	UniRef90_A0A417WCN8	397.0	0	Acyl carrier protein	N/A
eggNOG-mapper	UHGV-2112750_6	411902.CLOBOL_05646	273.0	0	N/A	N/A
structural_annotation	UHGV-2112750_6	PF14301	N/A	N/A	N/A	N/A
PHROG	UHGV-2112750_8	phrog_30004	44.1	0.0000000000023	N/A	unknown function
eggNOG-mapper	UHGV-2112750_8	610130.Closa_0759	116.0	2.65e-27	N/A	N/A
PHROG	UHGV-2112750_9	phrog_17196	81.6	8.2e-24	kinase	other
UniRef90	UHGV-2112750_9	UniRef90_A0A2M8Z316	154.0	6.79069e-42	Collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-2112750_9	742733.HMPREF9469_01805	208.0	0	N/A	N/A
structural_annotation	UHGV-2112750_9	PF13619,COG3536	N/A	N/A	N/A	N/A
PHROG	UHGV-2112750_11	phrog_18190	480.4	0	N/A	unknown function
UniRef90	UHGV-2112750_11	UniRef90_UPI0015934142	829.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-2112750_11	742733.HMPREF9469_01807	715.0	0	N/A	N/A
Pfam	UHGV-2112750_11	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-2112750_11	PF14594,NF033848,COG3501	N/A	N/A	N/A	N/A
PHROG	UHGV-2112750_12	phrog_1194	46.3	0.00000000000065	N/A	unknown function
eggNOG-mapper	UHGV-2112750_12	1304866.K413DRAFT_3047	180.0	0	N/A	N/A
Pfam	UHGV-2112750_12	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-2112750_12	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2112750_13	phrog_1535	296.0	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-2112750_13	33035.JPJF01000093_gene2243	252.0	0	phage tail tape measure protein	N/A
COG	UHGV-2112750_13	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-2112750_13	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-2112750_14	phrog_706	133.7	1.2e-39	N/A	unknown function
UniRef90	UHGV-2112750_14	UniRef90_UPI0011DC8B0C	271.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2112750_14	411902.CLOBOL_00127	236.0	0	N/A	N/A
Pfam	UHGV-2112750_14	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2112750_14	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2112750_15	phrog_11299	178.6	0	N/A	unknown function
eggNOG-mapper	UHGV-2112750_15	1298920.KI911353_gene2067	107.0	8.34e-28	N/A	N/A
structural_annotation	UHGV-2112750_15	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-2112750_16	phrog_3099	156.3	0	N/A	unknown function
eggNOG-mapper	UHGV-2112750_16	411902.CLOBOL_00129	257.0	0	N/A	N/A
structural_annotation	UHGV-2112750_16	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2112750_17	phrog_3266	129.8	1.1e-38	tail completion	connector
eggNOG-mapper	UHGV-2112750_17	411902.CLOBOL_00130	215.0	0	N/A	N/A
structural_annotation	UHGV-2112750_17	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-2112750_18	phrog_556	96.3	9.3e-29	minor head protein	head and packaging
UniRef90	UHGV-2112750_18	UniRef90_UPI0015948E32	236.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-2112750_18	411902.CLOBOL_00131	237.0	0	Minor capsid protein	N/A
Pfam	UHGV-2112750_18	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-2112750_18	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-2112750_19	phrog_3366	80.5	1.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-2112750_19	411902.CLOBOL_00132	192.0	0	N/A	N/A
Pfam	UHGV-2112750_19	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-2112750_19	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2112750_20	phrog_541	104.7	6.3e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-2112750_20	411902.CLOBOL_00133	159.0	0	N/A	N/A
PHROG	UHGV-2112750_21	phrog_10	185.6	0	major head protein	head and packaging
UniRef90	UHGV-2112750_21	UniRef90_A0A3R6X865	715.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-2112750_21	411902.CLOBOL_00134	684.0	0	Phage capsid family	N/A
Pfam	UHGV-2112750_21	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-2112750_21	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-2112750_21	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-2112750_21	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2112750_22	phrog_194	92.0	8.3e-27	head scaffolding protein	head and packaging
UniRef90	UHGV-2112750_22	UniRef90_UPI000E449396	265.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-2112750_22	411902.CLOBOL_00135	239.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-2112750_22	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-2112750_22	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2112750_23	phrog_355	58.5	1e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2112750_23	UniRef90_A0A396KGT7	214.0	0	N/A	N/A
eggNOG-mapper	UHGV-2112750_23	97138.C820_00250	128.0	2.77e-37	N/A	N/A
Pfam	UHGV-2112750_23	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-2112750_23	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-2112750_24	phrog_30750	57.1	2.1e-16	N/A	unknown function
PHROG	UHGV-2112750_25	phrog_581	307.4	0	minor head protein	head and packaging
UniRef90	UHGV-2112750_25	UniRef90_UPI001593C099	712.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-2112750_25	411902.CLOBOL_00137	590.0	0	N/A	N/A
Pfam	UHGV-2112750_25	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2112750_25	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2112750_25	PF06152,PF04002	N/A	N/A	N/A	N/A
PHROG	UHGV-2112750_26	phrog_533	411.6	0	portal protein	head and packaging
UniRef90	UHGV-2112750_26	UniRef90_A0A396QLL8	808.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-2112750_26	411902.CLOBOL_00138	745.0	0	N/A	N/A
Pfam	UHGV-2112750_26	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-2112750_26	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-2112750_27	K06909	95.8	5.6e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2112750_27	phrog_2	103.4	3.9e-30	terminase large subunit	head and packaging
UniRef90	UHGV-2112750_27	UniRef90_R5ILS3	847.0	0	Phage terminase large subunit PBSX family	N/A
eggNOG-mapper	UHGV-2112750_27	1449050.JNLE01000003_gene3895	593.0	0	phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-2112750_27	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-2112750_27	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2112750_27	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2112750_28	phrog_509	287.7	0	terminase small subunit	head and packaging
UniRef90	UHGV-2112750_28	UniRef90_R5J299	418.0	0	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-2112750_28	1449050.JNLE01000003_gene3896	274.0	0	DNA packaging	N/A
Pfam	UHGV-2112750_28	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
NCBIFam	UHGV-2112750_28	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-2112750_28	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2112750_28	PF06056,NF040601,COG5484	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2112750_29	565664.EFXG_00860	106.0	1.68e-25	N/A	N/A
PHROG	UHGV-2112750_30	phrog_36	56.6	5.5e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-2112750_30	UniRef90_A0A417C341	216.0	0	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-2112750_30	411902.CLOBOL_05672	177.0	0	N/A	N/A
structural_annotation	UHGV-2112750_30	PF02996	N/A	N/A	N/A	N/A