UHGV-2114067 (vOTU-008092)

Viral Genome: UHGV-2114067

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2114067
vOTU ID	vOTU-008092
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029536\|Ga0244918_100093\|provirus_84060_123179
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	97.49 (High-quality)
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9812
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	39.04
Jumbo phage	No

Genome content
Genome length (bp)	34,288
GC content	42.18%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	59
CDS density	91%
Average CDS length (bps)	528.20
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 97.49)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2114067_1	phrog_7854	135.9	0	endolysin	lysis
UniRef90	UHGV-2114067_1	UniRef90_A0A373SW30	734.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-2114067_1	411462.DORLON_00764	229.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-2114067_1	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-2114067_1	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-2114067_1	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-2114067_1	PF01520,TIGR02883,COG0860,COG5263	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_2	phrog_18218	135.2	1.90001e-40	N/A	unknown function
UniRef90	UHGV-2114067_2	UniRef90_A0A373SUI3	191.0	0	Ribonuclease	N/A
eggNOG-mapper	UHGV-2114067_2	658655.HMPREF0988_02546	156.0	0	N/A	N/A
structural_annotation	UHGV-2114067_2	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_3	phrog_1863	57.6	4e-17	N/A	unknown function
eggNOG-mapper	UHGV-2114067_3	1226322.HMPREF1545_04027	68.9	0.0000000000000223	N/A	N/A
PHROG	UHGV-2114067_4	phrog_20274	94.6	1.2e-27	N/A	unknown function
UniRef90	UHGV-2114067_4	UniRef90_A0A173TUK0	114.0	3.83e-31	Predicted membrane protein	N/A
eggNOG-mapper	UHGV-2114067_4	1203606.HMPREF1526_00964	105.0	4.77e-28	Putative ABC-transporter type IV	N/A
Pfam	UHGV-2114067_4	PF06541	N/A	N/A	Putative ABC-transporter type IV	ABC_trans_CmpB
COG	UHGV-2114067_4	COG4905	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2114067_5	411461.DORFOR_00723	60.5	0.00000000000732	N/A	N/A
eggNOG-mapper	UHGV-2114067_6	411461.DORFOR_01184	137.0	1.90002e-41	N/A	N/A
structural_annotation	UHGV-2114067_6	PF07703,NF038114,COG5501	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_7	phrog_32322	95.1	4.3e-28	N/A	unknown function
UniRef90	UHGV-2114067_7	UniRef90_A0A373SWC9	205.0	0	Ig-like_bact domain-containing protein	N/A
eggNOG-mapper	UHGV-2114067_7	411461.DORFOR_00725	138.0	3.26993e-41	N/A	N/A
Pfam	UHGV-2114067_7	PF13754	N/A	N/A	N/A	Big_3_4
KOfam	UHGV-2114067_8	K13276	93.4	1.4e-27	bpr; bacillopeptidase F [EC:3.4.21.-]	N/A
PHROG	UHGV-2114067_8	phrog_11157	250.2	0	N/A	unknown function
UniRef90	UHGV-2114067_8	UniRef90_A0A373STT7	489.0	0	Big_13 domain-containing protein	N/A
eggNOG-mapper	UHGV-2114067_8	411461.DORFOR_01182	377.0	0	N/A	N/A
Pfam	UHGV-2114067_8	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-2114067_8	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
NCBIFam	UHGV-2114067_8	NF033510.3	N/A	N/A	Ca2+-stabilized repeat-containing adhesin	N/A
COG	UHGV-2114067_8	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-2114067_8	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_9	phrog_1382	77.9	6.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-2114067_9	411461.DORFOR_00727	115.0	1.84e-33	N/A	N/A
PHROG	UHGV-2114067_10	phrog_12931	98.3	5.7e-29	N/A	unknown function
eggNOG-mapper	UHGV-2114067_10	411461.DORFOR_00728	139.0	7.14999e-41	N/A	N/A
PHROG	UHGV-2114067_11	phrog_25635	257.7	0	N/A	unknown function
eggNOG-mapper	UHGV-2114067_11	1280698.AUJS01000007_gene1050	248.0	0	N/A	N/A
structural_annotation	UHGV-2114067_11	PF20747,NF012201	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_12	phrog_538	216.2	0	minor tail protein	tail
UniRef90	UHGV-2114067_12	UniRef90_UPI001F3E20C1	459.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-2114067_12	1280698.AUJS01000007_gene1049	452.0	0	N/A	N/A
Pfam	UHGV-2114067_12	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-2114067_12	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_13	phrog_33	51.8	0.000000000000018	distal tail protein Dit	tail
UniRef90	UHGV-2114067_13	UniRef90_UPI00156E3DDD	519.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-2114067_13	1280698.AUJS01000007_gene1048	380.0	0	N/A	N/A
structural_annotation	UHGV-2114067_13	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_14	phrog_6900	264.4	0	tail length tape measure protein	tail
UniRef90	UHGV-2114067_14	UniRef90_A0A174L0T5	805.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-2114067_14	1280698.AUJS01000007_gene1047	558.0	0	nuclear chromosome segregation	N/A
COG	UHGV-2114067_14	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2114067_14	PF20155,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_15	phrog_1633	145.8	1.20512e-43	N/A	unknown function
UniRef90	UHGV-2114067_15	UniRef90_UPI0006C2F0F2	207.0	0	N/A	N/A
eggNOG-mapper	UHGV-2114067_15	1280698.AUJS01000007_gene1046	145.0	1.30321e-43	N/A	N/A
Pfam	UHGV-2114067_15	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-2114067_15	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_16	phrog_1526	105.9	1.9e-31	N/A	unknown function
eggNOG-mapper	UHGV-2114067_16	665950.HMPREF1025_02524	94.0	4e-24	N/A	N/A
PHROG	UHGV-2114067_17	phrog_117	184.6	0	major tail protein	tail
UniRef90	UHGV-2114067_17	UniRef90_UPI00156E6ACC	307.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-2114067_17	1280698.AUJS01000007_gene1044	270.0	0	domain, Protein	N/A
COG	UHGV-2114067_17	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2114067_17	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_18	phrog_123	59.0	8.1e-17	tail terminator	connector
eggNOG-mapper	UHGV-2114067_18	1280698.AUJS01000007_gene1043	167.0	0	N/A	N/A
structural_annotation	UHGV-2114067_18	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_19	phrog_387	42.5	0.000000000007	neck protein	connector
PHROG	UHGV-2114067_20	phrog_501	86.7	2.1e-25	head closure Hc1	connector
eggNOG-mapper	UHGV-2114067_20	1280698.AUJS01000007_gene1041	169.0	0	N/A	N/A
structural_annotation	UHGV-2114067_20	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_21	phrog_137	59.8	4e-17	head-tail adaptor Ad1	connector
UniRef90	UHGV-2114067_21	UniRef90_R6G3G4	169.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-2114067_21	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-2114067_21	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_23	phrog_10	106.9	2.3e-31	major head protein	head and packaging
UniRef90	UHGV-2114067_23	UniRef90_A0A174L023	505.0	0	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
eggNOG-mapper	UHGV-2114067_23	205876.Q855V6_9CAUD	307.0	0	peptidase activity	N/A
Pfam	UHGV-2114067_23	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-2114067_23	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-2114067_23	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_24	phrog_1793	80.9	2.1e-23	head scaffolding protein	head and packaging
UniRef90	UHGV-2114067_24	UniRef90_A0A396KYN2	190.0	0	N/A	N/A
eggNOG-mapper	UHGV-2114067_24	78345.BMERY_0881	84.7	3.72e-18	N/A	N/A
Pfam	UHGV-2114067_24	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-2114067_24	PF14265	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2114067_25	PF11344	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_27	phrog_193	157.2	0	head maturation protease	head and packaging
UniRef90	UHGV-2114067_27	UniRef90_A0A6N8H118	260.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-2114067_27	748224.HMPREF9436_01469	273.0	0	N/A	N/A
COG	UHGV-2114067_27	COG5529	N/A	N/A	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	N/A
structural_annotation	UHGV-2114067_27	PF20344	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_28	phrog_104	242.9	0	portal protein	head and packaging
UniRef90	UHGV-2114067_28	UniRef90_A0A174L3Q9	843.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-2114067_28	1123263.AUKY01000112_gene2059	578.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-2114067_28	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-2114067_28	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_29	phrog_9	169.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-2114067_29	UniRef90_UPI001D0087E2	871.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-2114067_29	1123263.AUKY01000112_gene2060	696.0	0	phage terminase, large subunit	N/A
COG	UHGV-2114067_29	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-2114067_29	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
UniRef90	UHGV-2114067_30	UniRef90_R6GFM0	129.0	2.56e-37	Conserved domain protein	N/A
structural_annotation	UHGV-2114067_30	PF19962	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_31	phrog_338	59.6	6.3e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2114067_31	UniRef90_A0A3E4GMG2	211.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-2114067_31	748224.HMPREF9436_01465	169.0	0	N/A	N/A
PHROG	UHGV-2114067_33	phrog_36	92.0	6.7e-27	transcriptional regulator	transcription regulation
UniRef90	UHGV-2114067_33	UniRef90_A0A373STV4	285.0	0	N/A	N/A
eggNOG-mapper	UHGV-2114067_33	411461.DORFOR_00754	153.0	1.4013e-45	sigma factor activity	N/A
Pfam	UHGV-2114067_33	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-2114067_33	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-2114067_33	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_35	phrog_20593	47.9	0.0000000000002	N/A	unknown function
PHROG	UHGV-2114067_38	phrog_7566	85.0	5.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-2114067_38	97139.C824_00037	110.0	9.14e-31	N/A	N/A
eggNOG-mapper	UHGV-2114067_39	1196322.A370_05726	65.1	0.00000000000117	N/A	N/A
PHROG	UHGV-2114067_40	phrog_15077	93.0	5.8e-27	N/A	unknown function
UniRef90	UHGV-2114067_40	UniRef90_A0A3A6HZA9	235.0	0	N/A	N/A
eggNOG-mapper	UHGV-2114067_40	1280698.AUJS01000007_gene1019	372.0	0	N/A	N/A
structural_annotation	UHGV-2114067_40	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_41	phrog_8470	232.3	0	N/A	unknown function
UniRef90	UHGV-2114067_41	UniRef90_UPI001C01E393	581.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-2114067_41	1280698.AUJS01000007_gene1018	855.0	0	N/A	N/A
Pfam	UHGV-2114067_41	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-2114067_41	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_42	phrog_4433	70.5	2.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-2114067_42	1280698.AUJS01000007_gene1017	188.0	0	N/A	N/A
eggNOG-mapper	UHGV-2114067_43	1280698.AUJS01000007_gene1016	227.0	0	N/A	N/A
KOfam	UHGV-2114067_44	K03469	51.2	0.000000000000025	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-2114067_44	phrog_531	61.4	1.7e-17	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2114067_44	UniRef90_A0A844KCI1	292.0	0	Ribonuclease HI	N/A
eggNOG-mapper	UHGV-2114067_44	665950.HMPREF1025_02551	152.0	1.4013e-45	RNase H	N/A
Pfam	UHGV-2114067_44	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-2114067_44	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-2114067_44	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_45	phrog_3584	154.2	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2114067_45	665950.HMPREF1025_02552	314.0	0	N/A	N/A
structural_annotation	UHGV-2114067_45	PF21578,NF041486	N/A	N/A	N/A	N/A
UniRef90	UHGV-2114067_48	UniRef90_A0A3E4LWT8	130.0	3.85e-38	HTH psq-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2114067_48	1304866.K413DRAFT_1183	52.0	0.000000105	N/A	N/A
structural_annotation	UHGV-2114067_48	PF21291,MF_00535,NF007257,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2114067_49	PF20037,COG3212	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_50	phrog_28292	138.3	1.40004e-41	N/A	unknown function
UniRef90	UHGV-2114067_50	UniRef90_A0A8B3BZ84	90.5	2.53e-22	3-hydroxyacyl-CoA dehydrogenase	N/A
eggNOG-mapper	UHGV-2114067_50	500632.CLONEX_01438	76.3	1.84e-17	N/A	N/A
UniRef90	UHGV-2114067_52	UniRef90_A0A1C5ULX1	102.0	7.55e-27	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2114067_52	1232446.BAIE02000002_gene796	65.9	0.000000000000274	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-2114067_52	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-2114067_52	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-2114067_55	UniRef90_UPI001EE0CE96	124.0	4.18e-36	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-2114067_55	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-2114067_56	K22299	66.1	7.8e-19	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-2114067_56	phrog_8	77.2	3.3e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-2114067_56	UniRef90_UPI001EE0856C	191.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2114067_56	1256908.HMPREF0373_00219	85.9	1.9e-20	sequence-specific DNA binding	N/A
PADLOC	UHGV-2114067_56	retron_type_VI_hth_cluster2_1	54.7	0.0000000000000029	N/A	Retron
Pfam	UHGV-2114067_56	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2114067_56	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2114067_56	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_57	phrog_87	89.2	3.6e-26	metallo-protease	other
UniRef90	UHGV-2114067_57	UniRef90_UPI001D01270F	322.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-2114067_57	742765.HMPREF9457_02093	197.0	0	IrrE N-terminal-like domain	N/A
Pfam	UHGV-2114067_57	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-2114067_57	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-2114067_57	PF06114,COG3800	N/A	N/A	N/A	N/A
PHROG	UHGV-2114067_58	phrog_1847	508.4	0	N/A	unknown function
UniRef90	UHGV-2114067_58	UniRef90_UPI001D07EED3	621.0	0	N/A	N/A
eggNOG-mapper	UHGV-2114067_58	1235792.C808_05258	490.0	0	N/A	N/A
Pfam	UHGV-2114067_58	PF13250	N/A	N/A	N/A	DUF4041
Pfam	UHGV-2114067_58	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-2114067_58	COG0172	N/A	N/A	Seryl-tRNA synthetase	N/A
structural_annotation	UHGV-2114067_58	PF13250,PF19824,MF_01506	N/A	N/A	N/A	N/A
KOfam	UHGV-2114067_59	K14059	154.1	1.4013e-45	int; integrase	N/A
PHROG	UHGV-2114067_59	phrog_1	149.5	2.66247e-44	integrase	integration and excision
UniRef90	UHGV-2114067_59	UniRef90_A0A373SU30	721.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-2114067_59	610130.Closa_1360	301.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2114067_59	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-2114067_59	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2114067_59	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2114067_59	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A