UHGV-2123883 (vOTU-059386)

Viral Genome: UHGV-2123883

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2123883
vOTU ID	vOTU-059386
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029703\|Ga0245234_100782
Associated BioSample	SAMEA3449286
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9822
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	18.59
Jumbo phage	No

Genome content
Genome length (bp)	36,247
GC content	57.82%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	66
CDS density	94%
Average CDS length (bps)	518.09
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2123883_1	phrog_14030	142.4	2.59941e-42	N/A	unknown function
UniRef90	UHGV-2123883_1	UniRef90_R6LL81	244.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-2123883_1	1121866.AUGK01000003_gene1444	91.7	1.76e-18	amidase activity	N/A
COG	UHGV-2123883_1	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-2123883_2	phrog_13256	67.2	1.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-2123883_2	1226322.HMPREF1545_00132	73.6	2.37e-16	N/A	N/A
UniRef90	UHGV-2123883_5	UniRef90_A0A521IRB0	55.5	0.000000616	Chitin-binding type-3 domain-containing protein	N/A
structural_annotation	UHGV-2123883_5	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_7	phrog_35892	123.7	5.8e-37	N/A	unknown function
UniRef90	UHGV-2123883_7	UniRef90_UPI001F37D978	155.0	1.36e-39	leucine-rich repeat domain-containing protein	N/A
eggNOG-mapper	UHGV-2123883_7	471875.RUMLAC_02240	138.0	1.2e-33	dockerin type I repeat-containing domain protein	N/A
Pfam	UHGV-2123883_7	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
Pfam	UHGV-2123883_7	PF13855	N/A	N/A	Leucine rich repeat	LRR_8
NCBIFam	UHGV-2123883_7	TIGR02167.1	N/A	N/A	bacterial surface protein 26-residue repeat	N/A
COG	UHGV-2123883_7	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2123883_7	PF13306,NF041351	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2123883_8	411471.SUBVAR_06929	309.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-2123883_8	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-2123883_9	PF10651	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2123883_10	PF18614,MF_00085,NF003076	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_11	phrog_26795	131.6	4.1e-39	N/A	unknown function
UniRef90	UHGV-2123883_11	UniRef90_A0A5J6T4K8	135.0	8.12e-33	Minor tail protein	N/A
eggNOG-mapper	UHGV-2123883_11	1195236.CTER_5102	136.0	3.45e-34	N/A	N/A
structural_annotation	UHGV-2123883_11	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_12	phrog_37549	78.3	3e-25	virion structural protein	head and packaging
UniRef90	UHGV-2123883_12	UniRef90_A0A3D0W045	231.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-2123883_12	1195236.CTER_5103	126.0	1.78e-27	N/A	N/A
structural_annotation	UHGV-2123883_12	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_13	phrog_33680	152.7	1.4013e-45	N/A	unknown function
UniRef90	UHGV-2123883_13	UniRef90_A0A1M6L1P7	259.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-2123883_13	1195236.CTER_5104	248.0	0	nuclear chromosome segregation	N/A
COG	UHGV-2123883_13	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-2123883_13	TIGR01760,COG5280	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2123883_14	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_15	phrog_88	83.6	2.3e-24	major tail protein	tail
UniRef90	UHGV-2123883_15	UniRef90_S0FUN2	117.0	1.19e-29	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-2123883_15	1195236.CTER_5106	117.0	1.99e-30	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-2123883_15	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-2123883_15	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2123883_15	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_16	phrog_5	45.3	0.0000000000018	tail completion or Neck1 protein	connector
structural_annotation	UHGV-2123883_16	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2123883_17	1487921.DP68_11350	61.2	0.000000000099	N/A	N/A
structural_annotation	UHGV-2123883_17	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_18	phrog_1951	74.9	7.3e-22	head-tail adaptor	connector
UniRef90	UHGV-2123883_18	UniRef90_UPI001B02B074	65.1	0.0000000000129	phage head closure protein	N/A
eggNOG-mapper	UHGV-2123883_18	1094508.Tsac_2422	54.3	0.0000000403	Phage head-tail joining protein	N/A
Pfam	UHGV-2123883_18	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-2123883_18	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-2123883_18	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-2123883_18	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_19	phrog_5223	46.0	0.00000000000067	neck protein	connector
UniRef90	UHGV-2123883_19	UniRef90_B6W9Y5	61.6	0.000000000257	Putative phage DNA packaging protein	N/A
eggNOG-mapper	UHGV-2123883_19	561177.ANHYDRO_01411	61.6	0.0000000000431	N/A	N/A
PHROG	UHGV-2123883_20	phrog_10	180.3	0	major head protein	head and packaging
UniRef90	UHGV-2123883_20	UniRef90_UPI00189AE5FE	419.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-2123883_20	1280689.AUJC01000011_gene1521	392.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-2123883_20	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-2123883_20	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-2123883_20	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-2123883_20	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-2123883_21	K01358	133.2	2.7e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-2123883_21	phrog_94	202.7	0	head maturation protease	head and packaging
UniRef90	UHGV-2123883_21	UniRef90_UPI0018979DC8	203.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-2123883_21	1280689.AUJC01000011_gene1520	188.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-2123883_21	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-2123883_21	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-2123883_21	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_22	phrog_12	182.0	0	portal protein	head and packaging
UniRef90	UHGV-2123883_22	UniRef90_UPI001898FCCE	507.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-2123883_22	626523.GCWU000342_01027	505.0	0	Portal protein	N/A
Pfam	UHGV-2123883_22	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-2123883_22	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-2123883_22	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_23	phrog_9	379.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-2123883_23	UniRef90_A0A1Y3W5R1	780.0	0	Terminase	N/A
eggNOG-mapper	UHGV-2123883_23	1203606.HMPREF1526_00981	738.0	0	Terminase	N/A
Pfam	UHGV-2123883_23	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-2123883_23	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-2123883_23	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-2123883_23	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_24	phrog_1066	129.7	9.6e-39	N/A	unknown function
eggNOG-mapper	UHGV-2123883_24	1341151.ASZU01000004_gene265	120.0	1.53e-33	N/A	N/A
structural_annotation	UHGV-2123883_24	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_25	phrog_119	48.2	0.00000000000014	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2123883_25	UniRef90_A0A174XSZ8	124.0	1.18e-34	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-2123883_25	1235793.C809_01915	117.0	2e-32	HNH endonuclease	N/A
Pfam	UHGV-2123883_25	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-2123883_25	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
eggNOG-mapper	UHGV-2123883_26	1297617.JPJD01000059_gene2640	80.5	1.62e-17	N/A	N/A
structural_annotation	UHGV-2123883_26	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_27	phrog_3584	115.2	4.8e-34	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2123883_27	537013.CLOSTMETH_02141	67.4	0.0000000000641	N/A	N/A
structural_annotation	UHGV-2123883_27	PF21578,MF_00360	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2123883_28	PF08271	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2123883_31	PF10013	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_33	phrog_190	104.3	1.1e-30	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2123883_33	UniRef90_UPI0006C2AC63	131.0	2.83e-36	N/A	N/A
eggNOG-mapper	UHGV-2123883_33	1226322.HMPREF1545_00295	118.0	1.01e-31	N/A	N/A
Pfam	UHGV-2123883_33	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-2123883_33	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_34	phrog_22543	43.0	0.0000000000082	N/A	unknown function
PHROG	UHGV-2123883_36	phrog_38832	66.9	1.2e-20	N/A	unknown function
eggNOG-mapper	UHGV-2123883_36	665956.HMPREF1032_03087	64.7	0.0000000000435	N/A	N/A
structural_annotation	UHGV-2123883_36	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_37	phrog_38832	70.8	1.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-2123883_37	665956.HMPREF1032_03087	124.0	1.21e-34	N/A	N/A
PHROG	UHGV-2123883_38	phrog_3136	136.3	9.79998e-41	N/A	unknown function
UniRef90	UHGV-2123883_38	UniRef90_A0A843H9M8	94.7	6.38e-21	ASCH domain-containing protein	N/A
COG	UHGV-2123883_38	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-2123883_38	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
UniRef90	UHGV-2123883_39	UniRef90_UPI000E2F27AF	52.8	0.00000226	N/A	N/A
Pfam	UHGV-2123883_39	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-2123883_39	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_40	phrog_424	77.4	1.7e-22	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-2123883_40	445972.ANACOL_01819	494.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-2123883_40	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-2123883_40	PF01507,MF_00064,NF010367,COG0175	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2123883_44	PF05082	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2123883_45	NF041247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2123883_47	PF10548	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_49	phrog_478	134.6	3.09999e-40	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-2123883_49	UniRef90_A0A373Q857	164.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-2123883_49	1111121.HMPREF1247_0834	100.0	2.54e-25	N/A	N/A
eggNOG-mapper	UHGV-2123883_50	642492.Clole_0961	69.7	0.00000000000000757	N/A	N/A
structural_annotation	UHGV-2123883_50	PF12286	N/A	N/A	N/A	N/A
KOfam	UHGV-2123883_56	K22300	52.8	0.0000000000000089	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2123883_56	phrog_2967	40.8	0.0000000000098	transcriptional regulator	transcription regulation
UniRef90	UHGV-2123883_56	UniRef90_A0A1Y4L0A2	132.0	1.98e-37	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2123883_56	748224.HMPREF9436_01444	111.0	8.99e-30	N/A	N/A
Pfam	UHGV-2123883_56	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2123883_56	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2123883_56	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2123883_58	622312.ROSEINA2194_02761	59.3	0.0000000495	NOG18738 non supervised orthologous group	N/A
COG	UHGV-2123883_58	COG2169	N/A	N/A	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	N/A
structural_annotation	UHGV-2123883_58	PF02805	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_59	phrog_10292	74.2	1e-21	N/A	unknown function
UniRef90	UHGV-2123883_59	UniRef90_A0A416W984	96.3	6.39e-23	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-2123883_59	537013.CLOSTMETH_02269	80.9	2.76e-17	TM2 domain	N/A
Pfam	UHGV-2123883_59	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-2123883_59	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-2123883_59	COG2314	N/A	N/A	N/A	N/A
Pfam	UHGV-2123883_60	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2123883_60	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-2123883_60	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-2123883_61	K06400	374.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-2123883_61	phrog_95	359.9	0	integrase	integration and excision
UniRef90	UHGV-2123883_61	UniRef90_UPI00189960B8	507.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-2123883_61	1235835.C814_00825	410.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-2123883_61	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-2123883_61	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-2123883_61	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-2123883_61	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-2123883_61	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-2123883_62	UniRef90_A0A8F0WD75	82.0	1.99e-16	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-2123883_62	1378168.N510_03079	68.9	0.000000000008	N/A	N/A
structural_annotation	UHGV-2123883_63	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-2123883_64	phrog_16490	54.1	0.0000000000000032	N/A	unknown function
eggNOG-mapper	UHGV-2123883_64	641112.ACOK01000103_gene525	53.9	0.00000285	N/A	N/A
structural_annotation	UHGV-2123883_66	PF13412,MF_00674,COG1342	N/A	N/A	N/A	N/A