Overview | |
---|---|
UHGV ID | UHGV-2127391 |
vOTU ID | vOTU-094518 |
Representative Genome? | Yes |
Source | IMGVR4 |
Original genome ID | 3300029622|Ga0245124_1002647|provirus_2_12884 |
Associated BioSample | SAMEA3449176 |
Viral genome confidence | Uncertain |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 20.97 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 2 |
CheckV host markers | 1 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9421 |
Virus hallmark genes (geNomad) | 0 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Uncertain - plasmid or chromosomal |
viralVerify score | -5.61 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 12,883 |
GC content | 41.91% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 20 |
CDS density | 84% |
Average CDS length (bps) | 543.75 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |