UHGV-2137416 (vOTU-021545)

Viral Genome: UHGV-2137416

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2137416
vOTU ID	vOTU-021545
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029681\|Ga0245167_101044
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	54.87 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9755
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	16.75
Jumbo phage	No

Genome content
Genome length (bp)	21,284
GC content	50.71%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	36
CDS density	99%
Average CDS length (bps)	586.50
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 54.87)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2137416_1	K01160	47.6	0.00000000000042	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-2137416_1	phrog_140	88.8	6.7e-26	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2137416_1	UniRef90_UPI001915D0A5	113.0	1e-29	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-2137416_1	545697.HMPREF0216_02819	100.0	1.24e-25	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-2137416_1	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-2137416_1	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-2137416_1	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-2137416_4	phrog_17740	42.5	0.000000000005	N/A	unknown function
eggNOG-mapper	UHGV-2137416_4	742738.HMPREF9460_00730	66.2	0.00000000000164	N/A	N/A
UniRef90	UHGV-2137416_7	UniRef90_U2SKB7	130.0	1.21e-36	N/A	N/A
Pfam	UHGV-2137416_7	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-2137416_7	NF041588	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2137416_8	1304866.K413DRAFT_4695	75.5	4.22e-17	N/A	N/A
structural_annotation	UHGV-2137416_8	NF010673	N/A	N/A	N/A	N/A
PHROG	UHGV-2137416_9	phrog_1891	80.0	1.3e-25	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2137416_9	UniRef90_A0A4Z0YED2	109.0	7.2e-27	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-2137416_9	1298920.KI911353_gene4861	70.1	0.00000000000129	HNH endonuclease	N/A
Pfam	UHGV-2137416_9	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-2137416_9	PF13392	N/A	N/A	N/A	N/A
PHROG	UHGV-2137416_11	phrog_424	86.8	2.4e-25	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-2137416_11	445972.ANACOL_01819	492.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-2137416_11	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-2137416_11	PF01507,MF_00064,NF010367,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-2137416_13	phrog_36	84.5	1.4e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-2137416_13	UniRef90_A0A3D3FGT2	104.0	3.86e-26	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-2137416_13	552396.HMPREF0863_01424	68.6	0.000000000000737	sigma factor activity	N/A
Pfam	UHGV-2137416_13	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-2137416_13	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-2137416_13	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-2137416_15	K07474	59.5	1.2e-16	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-2137416_15	phrog_51	58.5	1.7e-17	terminase small subunit	head and packaging
UniRef90	UHGV-2137416_15	UniRef90_A0A2V2FED9	154.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-2137416_15	1415775.U729_2598	89.4	7.66e-21	Terminase small subunit	N/A
Pfam	UHGV-2137416_15	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-2137416_15	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-2137416_15	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-2137416_16	K06909	92.6	4.7e-27	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2137416_16	phrog_2	67.4	2.9e-19	terminase large subunit	head and packaging
UniRef90	UHGV-2137416_16	UniRef90_UPI0006822C99	692.0	0	terminase	N/A
eggNOG-mapper	UHGV-2137416_16	645991.Sgly_0335	664.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-2137416_16	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2137416_16	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2137416_17	phrog_533	207.7	0	portal protein	head and packaging
UniRef90	UHGV-2137416_17	UniRef90_A0A372V6F6	445.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-2137416_17	1507.HMPREF0262_01175	444.0	0	N/A	N/A
structural_annotation	UHGV-2137416_17	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-2137416_18	phrog_581	284.3	0	minor head protein	head and packaging
UniRef90	UHGV-2137416_18	UniRef90_A0A1C6HBH6	439.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-2137416_18	1507.HMPREF0262_01176	552.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-2137416_18	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2137416_18	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2137416_18	PF06152	N/A	N/A	N/A	N/A
UniRef90	UHGV-2137416_21	UniRef90_A0A644YJM4	315.0	0	S-l_SbsC_C domain-containing protein	N/A
structural_annotation	UHGV-2137416_21	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2137416_23	phrog_541	80.5	1.7e-23	head-tail adaptor	connector
eggNOG-mapper	UHGV-2137416_23	1507.HMPREF0262_01180	118.0	8.91e-33	N/A	N/A
PHROG	UHGV-2137416_24	phrog_8710	110.0	1.2e-32	N/A	unknown function
eggNOG-mapper	UHGV-2137416_24	1507.HMPREF0262_01181	104.0	1.66e-27	N/A	N/A
structural_annotation	UHGV-2137416_24	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2137416_25	1507.HMPREF0262_01182	129.0	7.51e-37	N/A	N/A
PHROG	UHGV-2137416_26	phrog_2595	79.4	4e-23	head-tail connector protein	connector
UniRef90	UHGV-2137416_26	UniRef90_UPI000A26871F	122.0	4.83e-33	minor capsid protein	N/A
eggNOG-mapper	UHGV-2137416_26	1507.HMPREF0262_01183	137.0	9.49e-40	N/A	N/A
Pfam	UHGV-2137416_26	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-2137416_26	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-2137416_27	phrog_820	134.0	6.50001e-40	major tail protein	tail
eggNOG-mapper	UHGV-2137416_27	1507.HMPREF0262_01184	220.0	0	domain, Protein	N/A
COG	UHGV-2137416_27	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2137416_27	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2137416_28	phrog_8300	68.0	8.6e-20	N/A	unknown function
eggNOG-mapper	UHGV-2137416_28	1507.HMPREF0262_00213	91.3	1.11e-22	N/A	N/A
structural_annotation	UHGV-2137416_28	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-2137416_29	phrog_8355	101.8	2.3e-30	N/A	unknown function
UniRef90	UHGV-2137416_29	UniRef90_UPI0018A7EA5D	117.0	7.85e-32	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2137416_29	1507.HMPREF0262_01186	119.0	2.22e-33	N/A	N/A
Pfam	UHGV-2137416_29	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2137416_29	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2137416_30	phrog_1204	121.0	4.8e-39	tail protein	tail
eggNOG-mapper	UHGV-2137416_30	1158606.I579_01931	73.9	0.00000000018	phage tail tape measure protein	N/A
COG	UHGV-2137416_30	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-2137416_31	phrog_1194	67.7	1.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-2137416_31	585501.HMPREF6123_0824	91.7	3.86e-22	N/A	N/A
structural_annotation	UHGV-2137416_31	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2137416_32	phrog_13879	64.3	2.3e-29	N/A	unknown function
structural_annotation	UHGV-2137416_32	PF14594,PF00754,NF033848,COG3500,COG5156	N/A	N/A	N/A	N/A
COG	UHGV-2137416_34	COG4926	N/A	N/A	Phage-related protein	N/A
COG	UHGV-2137416_36	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A