UHGV-2137724 (vOTU-063285)

Viral Genome: UHGV-2137724

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2137724
vOTU ID	vOTU-063285
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029698\|Ga0245184_100568\|provirus_10062_45945
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	90.73 (High-quality)
Trimmed provirus	Yes
CheckV viral markers	15
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9597
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.15
Jumbo phage	No

Genome content
Genome length (bp)	31,247
GC content	37.89%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	49
CDS density	93%
Average CDS length (bps)	591.43
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 90.73)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-2137724_5	PF19199	N/A	N/A	Phage major coat protein, Gp8	Phage_coatGP8
KOfam	UHGV-2137724_6	K10954	108.5	9.1e-32	zot; zona occludens toxin	N/A
PHROG	UHGV-2137724_6	phrog_197	73.4	3.7e-21	Zot-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2137724_6	UniRef90_R6UB68	313.0	0	Zot domain-containing protein	N/A
eggNOG-mapper	UHGV-2137724_6	398512.JQKC01000060_gene2680	140.0	1.91e-38	Zonular occludens toxin (Zot)	N/A
Pfam	UHGV-2137724_6	PF05707	N/A	N/A	Zonular occludens toxin (Zot)	Zot
COG	UHGV-2137724_6	COG4128	N/A	N/A	Zona occludens toxin, predicted ATPase	N/A
structural_annotation	UHGV-2137724_6	PF05707,MF_04155,NF005424,COG4128	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2137724_7	1105031.HMPREF1141_2583	75.9	0.0000000000083	N/A	N/A
eggNOG-mapper	UHGV-2137724_8	394503.Ccel_1571	82.4	9.85e-20	N/A	N/A
KOfam	UHGV-2137724_9	K07467	180.6	0	nicK; putative DNA relaxase	N/A
PHROG	UHGV-2137724_9	phrog_453	70.4	9e-21	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2137724_9	UniRef90_R6UNI0	315.0	0	Replication initiation factor	N/A
eggNOG-mapper	UHGV-2137724_9	1235835.C814_01607	94.7	3.5e-19	Replication initiation factor	N/A
Pfam	UHGV-2137724_9	PF18106	N/A	N/A	Rolling Circle replication initiation protein N-terminal domain	Rol_Rep_N
Pfam	UHGV-2137724_9	PF02486	N/A	N/A	Replication initiation factor	Rep_trans
COG	UHGV-2137724_9	COG2946	N/A	N/A	DNA relaxase NicK	N/A
structural_annotation	UHGV-2137724_9	PF02486,PF18106,MF_00408,NF041493,COG2946	N/A	N/A	N/A	N/A
KOfam	UHGV-2137724_10	K04763	198.0	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-2137724_10	phrog_1	139.9	2.29995e-41	integrase	integration and excision
UniRef90	UHGV-2137724_10	UniRef90_R6UIE9	367.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-2137724_10	350688.Clos_1827	190.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2137724_10	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-2137724_10	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2137724_10	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-2137724_10	PF00589,PF02899,MF_01808,TIGR02225,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-2137724_11	K06400	369.7	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-2137724_11	phrog_95	358.2	0	integrase	integration and excision
UniRef90	UHGV-2137724_11	UniRef90_UPI00189960B8	536.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-2137724_11	1235835.C814_00825	487.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-2137724_11	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-2137724_11	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-2137724_11	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-2137724_11	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-2137724_11	PF00239,PF07508,PF19962,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-2137724_12	K07339	65.7	5.9e-19	hicA; mRNA interferase HicA [EC:3.1.-.-]	N/A
PHROG	UHGV-2137724_12	phrog_353	72.9	2.7e-21	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2137724_12	UniRef90_UPI0005D18D19	100.0	7.18e-27	type II toxin-antitoxin system HicA family toxin	N/A
eggNOG-mapper	UHGV-2137724_12	1514668.JOOA01000001_gene180	100.0	1.2e-27	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-2137724_12	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
COG	UHGV-2137724_12	COG1724	N/A	N/A	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	N/A
structural_annotation	UHGV-2137724_12	PF07927,COG1724	N/A	N/A	N/A	N/A
KOfam	UHGV-2137724_13	K18843	78.5	1.2e-22	hicB; antitoxin HicB	N/A
PHROG	UHGV-2137724_13	phrog_497	91.7	1.1e-26	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2137724_13	UniRef90_UPI0005D25C1A	172.0	0	type II toxin-antitoxin system HicB family antitoxin	N/A
eggNOG-mapper	UHGV-2137724_13	1514668.JOOA01000001_gene181	172.0	0	HicB_like antitoxin of bacterial toxin-antitoxin system	N/A
Pfam	UHGV-2137724_13	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-2137724_13	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-2137724_13	PF15919,COG1598	N/A	N/A	N/A	N/A
UniRef90	UHGV-2137724_14	UniRef90_A0A374DTF3	97.1	1.35e-22	N/A	N/A
PHROG	UHGV-2137724_15	phrog_1914	152.8	1.4013e-45	N/A	unknown function
UniRef90	UHGV-2137724_15	UniRef90_A0A374NDM7	216.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-2137724_15	1160721.RBI_I01604	191.0	0	N/A	N/A
Pfam	UHGV-2137724_15	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-2137724_15	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-2137724_15	PF06114,COG2856	N/A	N/A	N/A	N/A
UniRef90	UHGV-2137724_16	UniRef90_R6R9C1	124.0	2.82e-33	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2137724_16	718252.FP2_04820	71.6	0.0000000000000341	Cro/C1-type HTH DNA-binding domain	N/A
COG	UHGV-2137724_16	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
UniRef90	UHGV-2137724_17	UniRef90_R6R313	93.2	1.34e-23	N/A	N/A
eggNOG-mapper	UHGV-2137724_17	1347392.CCEZ01000005_gene1206	63.5	0.00000000000122	N/A	N/A
structural_annotation	UHGV-2137724_17	PF05339,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-2137724_21	phrog_34937	43.5	0.000000000005	N/A	unknown function
PHROG	UHGV-2137724_24	phrog_25754	88.5	3.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-2137724_24	1196322.A370_02055	79.3	1.01e-18	N/A	N/A
structural_annotation	UHGV-2137724_24	PF18195,MF_00257,NF041655,COG1923	N/A	N/A	N/A	N/A
PHROG	UHGV-2137724_26	phrog_38338	87.8	1.3e-25	N/A	unknown function
UniRef90	UHGV-2137724_26	UniRef90_UPI00189B3582	70.5	0.000000000000793	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-2137724_26	693746.OBV_24020	76.3	3.25e-16	N/A	N/A
PHROG	UHGV-2137724_27	phrog_8470	254.0	0	N/A	unknown function
UniRef90	UHGV-2137724_27	UniRef90_UPI00165E2CD5	134.0	4.5e-30	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-2137724_27	1501230.ET33_21150	133.0	1.57e-30	PcfJ-like protein	N/A
Pfam	UHGV-2137724_27	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-2137724_27	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-2137724_28	phrog_15609	121.9	1.4e-36	N/A	unknown function
eggNOG-mapper	UHGV-2137724_28	641112.ACOK01000073_gene2872	66.6	0.000000001	N/A	N/A
structural_annotation	UHGV-2137724_28	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-2137724_29	phrog_2245	86.6	2.8e-25	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-2137724_29	UniRef90_A0A2X3IMH1	55.1	0.000000102	N/A	N/A
eggNOG-mapper	UHGV-2137724_29	1567010.A0A0A7RU90_9VIRU	50.8	0.00000172	protein disulfide oxidoreductase activity	N/A
structural_annotation	UHGV-2137724_29	NF001611,COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-2137724_31	phrog_3584	237.7	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2137724_31	UniRef90_R6RCC6	207.0	0	Gp31	N/A
eggNOG-mapper	UHGV-2137724_31	1414720.CBYM010000002_gene589	170.0	0	N/A	N/A
structural_annotation	UHGV-2137724_31	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-2137724_32	phrog_824	149.7	7.00649e-45	N/A	unknown function
UniRef90	UHGV-2137724_32	UniRef90_A0A3R6I6C8	164.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-2137724_32	397288.C806_00096	152.0	0	VRR_NUC	N/A
Pfam	UHGV-2137724_32	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-2137724_32	PF08774	N/A	N/A	N/A	N/A
PHROG	UHGV-2137724_34	phrog_361	85.7	4.5e-25	terminase small subunit	head and packaging
UniRef90	UHGV-2137724_34	UniRef90_UPI001494A551	96.7	1.99e-23	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-2137724_34	1033744.CAEL01000029_gene1286	95.9	6.9e-24	Phage terminase, small subunit	N/A
Pfam	UHGV-2137724_34	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-2137724_34	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-2137724_35	phrog_9	300.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-2137724_35	UniRef90_A0A0L6JG50	826.0	0	Terminase	N/A
eggNOG-mapper	UHGV-2137724_35	398512.JQKC01000009_gene448	826.0	0	Phage Terminase	N/A
Pfam	UHGV-2137724_35	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-2137724_35	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-2137724_35	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-2137724_35	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-2137724_36	phrog_12	172.1	0	portal protein	head and packaging
UniRef90	UHGV-2137724_36	UniRef90_H2JJA2	490.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-2137724_36	755731.Clo1100_0545	490.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-2137724_36	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-2137724_36	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-2137724_36	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-2137724_36	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-2137724_37	K06904	131.0	1.2e-38	N/A	N/A
PHROG	UHGV-2137724_37	phrog_80	152.8	2.8026e-45	head maturation protease	head and packaging
UniRef90	UHGV-2137724_37	UniRef90_H2JJA3	184.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-2137724_37	755731.Clo1100_0546	184.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-2137724_37	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-2137724_37	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-2137724_37	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-2137724_37	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-2137724_38	phrog_10	168.7	0	major head protein	head and packaging
UniRef90	UHGV-2137724_38	UniRef90_F1TFK1	382.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-2137724_38	588581.Cpap_1272	382.0	0	Phage capsid family	N/A
Pfam	UHGV-2137724_38	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-2137724_38	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-2137724_38	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-2137724_38	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2137724_39	phrog_2550	65.9	3.6e-19	N/A	unknown function
UniRef90	UHGV-2137724_39	UniRef90_G2G0W0	55.1	0.0000000644	Prophage pi2 protein 35	N/A
eggNOG-mapper	UHGV-2137724_39	913865.DOT_5631	55.1	0.0000000108	N/A	N/A
structural_annotation	UHGV-2137724_39	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-2137724_40	phrog_1951	81.1	8.4e-24	head-tail adaptor	connector
UniRef90	UHGV-2137724_40	UniRef90_A0A373XMG4	85.9	1.92e-19	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-2137724_40	1414720.CBYM010000040_gene1649	64.7	0.00000000000518	head-tail adaptor	N/A
NCBIFam	UHGV-2137724_40	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-2137724_40	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-2137724_40	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-2137724_41	UniRef90_UPI001A9B6FBF	155.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-2137724_41	1414720.CBYM010000040_gene1650	126.0	3.04e-35	N/A	N/A
Pfam	UHGV-2137724_41	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-2137724_41	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-2137724_41	TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2137724_42	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2137724_43	phrog_885	164.6	0	major tail protein	tail
UniRef90	UHGV-2137724_43	UniRef90_UPI001C11708A	177.0	0	chitobiase/beta-hexosaminidase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-2137724_43	1321814.HMPREF9089_00935	173.0	0	N/A	N/A
structural_annotation	UHGV-2137724_43	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2137724_44	1321778.HMPREF1982_03556	53.5	0.000000199	N/A	N/A
PHROG	UHGV-2137724_46	phrog_23464	270.3	0	N/A	unknown function
eggNOG-mapper	UHGV-2137724_46	665950.HMPREF1025_02660	186.0	0	phage tail tape measure protein	N/A
COG	UHGV-2137724_46	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-2137724_46	COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-2137724_47	phrog_33	77.8	2.2e-22	distal tail protein Dit	tail
UniRef90	UHGV-2137724_47	UniRef90_UPI00189E4294	120.0	1.49e-29	phage tail family protein	N/A
eggNOG-mapper	UHGV-2137724_47	1540257.JQMW01000009_gene3383	56.6	0.00000293	N/A	N/A
Pfam	UHGV-2137724_47	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-2137724_47	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-2137724_47	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-2137724_48	phrog_1067	102.2	4.6e-30	minor head protein	head and packaging
UniRef90	UHGV-2137724_48	UniRef90_A0A1Y4NA30	110.0	1.01e-22	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-2137724_48	1160721.RBI_I01574	126.0	1.29e-28	Prophage endopeptidase tail	N/A
COG	UHGV-2137724_48	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-2137724_48	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A