UHGV-2139371 (vOTU-142741)

Viral Genome: UHGV-2139371

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2139371
vOTU ID	vOTU-142741
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029676\|Ga0243825_101116
Associated BioSample	SAMN05971532
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	62.39 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.982
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	36.18
Jumbo phage	No

Genome content
Genome length (bp)	24,364
GC content	49.00%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	36
CDS density	94%
Average CDS length (bps)	637.50
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 62.39)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2139371_1	phrog_6616	529.0	0	tail protein	tail
UniRef90	UHGV-2139371_1	UniRef90_A0A414EG21	436.0	0	Tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-2139371_1	476272.RUMHYD_01992	150.0	4.69e-35	N/A	N/A
structural_annotation	UHGV-2139371_1	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-2139371_2	phrog_1194	64.5	1.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-2139371_2	33035.JPJF01000093_gene2242	153.0	0	N/A	N/A
structural_annotation	UHGV-2139371_2	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2139371_3	phrog_1535	262.8	0	tail length tape measure protein	tail
UniRef90	UHGV-2139371_3	UniRef90_A0A1C5PIN9	956.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-2139371_3	33035.JPJF01000093_gene2243	583.0	0	phage tail tape measure protein	N/A
COG	UHGV-2139371_3	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-2139371_3	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-2139371_4	phrog_8355	100.7	5.3e-30	N/A	unknown function
UniRef90	UHGV-2139371_4	UniRef90_UPI001C031F13	120.0	1.27e-33	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2139371_4	33035.JPJF01000093_gene2244	97.1	1.7e-25	N/A	N/A
PHROG	UHGV-2139371_5	phrog_8300	88.6	5.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-2139371_5	33035.JPJF01000093_gene2245	114.0	1.26e-31	N/A	N/A
structural_annotation	UHGV-2139371_5	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2139371_6	phrog_820	120.8	6.9e-36	major tail protein	tail
eggNOG-mapper	UHGV-2139371_6	1282664.H354_06691	199.0	0	N/A	N/A
structural_annotation	UHGV-2139371_6	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2139371_7	phrog_2595	83.4	2.2e-24	head-tail connector protein	connector
UniRef90	UHGV-2139371_7	UniRef90_UPI001C00BA9C	187.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-2139371_7	679192.HMPREF9013_1297	106.0	1.13e-27	N/A	N/A
Pfam	UHGV-2139371_7	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-2139371_7	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-2139371_8	phrog_556	52.9	0.0000000000000063	minor head protein	head and packaging
eggNOG-mapper	UHGV-2139371_8	742740.HMPREF9474_03509	176.0	0	N/A	N/A
PHROG	UHGV-2139371_9	phrog_541	81.2	1.1e-23	head-tail adaptor	connector
eggNOG-mapper	UHGV-2139371_9	33035.JPJF01000093_gene2250	192.0	0	N/A	N/A
PHROG	UHGV-2139371_10	phrog_15682	60.6	2.3e-17	N/A	unknown function
UniRef90	UHGV-2139371_10	UniRef90_A0A841L8S8	66.6	0.00000000000128	Rho_N domain-containing protein	N/A
eggNOG-mapper	UHGV-2139371_10	1408823.AXUS01000024_gene2717	64.7	0.000000000000731	N/A	N/A
PHROG	UHGV-2139371_11	phrog_212	292.1	0	major head protein	head and packaging
UniRef90	UHGV-2139371_11	UniRef90_A0A416Q289	566.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-2139371_11	1151292.QEW_2433	507.0	0	N/A	N/A
structural_annotation	UHGV-2139371_11	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2139371_12	phrog_194	170.5	0	head scaffolding protein	head and packaging
UniRef90	UHGV-2139371_12	UniRef90_A0A174B6A1	261.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-2139371_12	1262449.CP6013_3198	172.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-2139371_12	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-2139371_12	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2139371_13	phrog_34731	61.6	1.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-2139371_13	365659.smi_0098	67.4	0.0000000000000875	Cysteine-rich CPCC	N/A
structural_annotation	UHGV-2139371_13	PF02699,MF_00369,TIGR00739,COG1862	N/A	N/A	N/A	N/A
PHROG	UHGV-2139371_14	phrog_581	260.9	0	minor head protein	head and packaging
UniRef90	UHGV-2139371_14	UniRef90_A0A373A8K2	614.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-2139371_14	33035.JPJF01000093_gene2255	474.0	0	N/A	N/A
Pfam	UHGV-2139371_14	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-2139371_14	PF21814	N/A	N/A	N/A	DUF6883
COG	UHGV-2139371_14	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-2139371_14	PF06152,PF21814	N/A	N/A	N/A	N/A
PHROG	UHGV-2139371_15	phrog_25639	129.7	5.6e-39	N/A	unknown function
eggNOG-mapper	UHGV-2139371_15	742740.HMPREF9474_03502	94.7	1.27e-24	N/A	N/A
PHROG	UHGV-2139371_16	phrog_533	266.5	0	portal protein	head and packaging
UniRef90	UHGV-2139371_16	UniRef90_UPI001C0F908C	827.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-2139371_16	1117108.PAALTS15_13582	507.0	0	N/A	N/A
structural_annotation	UHGV-2139371_16	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-2139371_17	K06909	82.8	4.7e-24	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2139371_17	phrog_2	71.5	1.7e-20	terminase large subunit	head and packaging
UniRef90	UHGV-2139371_17	UniRef90_UPI001BBD0083	842.0	0	Terminase	N/A
eggNOG-mapper	UHGV-2139371_17	742740.HMPREF9474_03500	682.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-2139371_17	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2139371_17	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-2139371_18	K07474	139.4	3.89995e-41	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-2139371_18	phrog_51	155.4	0	terminase small subunit	head and packaging
UniRef90	UHGV-2139371_18	UniRef90_A0A415L5B5	268.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-2139371_18	1298920.KI911353_gene4857	207.0	0	Terminase small subunit	N/A
Pfam	UHGV-2139371_18	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-2139371_18	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-2139371_18	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-2139371_19	phrog_36	72.4	7.8e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-2139371_19	UniRef90_UPI001D089637	132.0	5.37e-37	N/A	N/A
eggNOG-mapper	UHGV-2139371_19	1304866.K413DRAFT_3028	146.0	1.5134e-43	N/A	N/A
Pfam	UHGV-2139371_19	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-2139371_19	PF04545	N/A	N/A	N/A	N/A
PHROG	UHGV-2139371_24	phrog_15077	108.7	1e-31	N/A	unknown function
UniRef90	UHGV-2139371_24	UniRef90_UPI001D0741A0	184.0	0	N/A	N/A
eggNOG-mapper	UHGV-2139371_24	97139.C824_05986	331.0	0	N/A	N/A
structural_annotation	UHGV-2139371_24	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-2139371_25	phrog_8470	334.9	0	N/A	unknown function
UniRef90	UHGV-2139371_25	UniRef90_UPI001D086F83	783.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-2139371_25	1235792.C808_03081	785.0	0	PcfJ-like protein	N/A
Pfam	UHGV-2139371_25	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-2139371_25	PF14284	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2139371_26	1235792.C808_00065	217.0	0	N/A	N/A
PHROG	UHGV-2139371_27	phrog_7566	109.9	9.3e-33	N/A	unknown function
eggNOG-mapper	UHGV-2139371_27	411459.RUMOBE_00948	116.0	3.27e-32	N/A	N/A
KOfam	UHGV-2139371_28	K03469	46.9	0.00000000000052	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-2139371_28	phrog_531	60.6	2.8e-17	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2139371_28	UniRef90_A0A4Q7PJQ5	125.0	3.65e-34	RNase H superfamily protein	N/A
eggNOG-mapper	UHGV-2139371_28	546274.EIKCOROL_00863	58.5	0.0000000107	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-2139371_28	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-2139371_28	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-2139371_28	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-2139371_29	phrog_3584	132.9	2.4e-39	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2139371_29	33035.JPJF01000138_gene3005	267.0	0	N/A	N/A
structural_annotation	UHGV-2139371_29	PF01446	N/A	N/A	N/A	N/A
PHROG	UHGV-2139371_31	phrog_37702	45.2	0.0000000000011	N/A	unknown function
UniRef90	UHGV-2139371_33	UniRef90_A0A3R6ST41	73.9	4.68e-16	DNA-binding protein	N/A
eggNOG-mapper	UHGV-2139371_33	397290.C810_03448	63.2	0.00000000000159	N/A	N/A
structural_annotation	UHGV-2139371_33	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-2139371_35	K07741	203.9	0	antB; anti-repressor protein	N/A
PHROG	UHGV-2139371_35	phrog_63	167.5	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-2139371_35	UniRef90_UPI000E507582	385.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-2139371_35	658655.HMPREF0988_02592	340.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-2139371_35	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-2139371_35	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-2139371_35	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-2139371_35	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A