UHGV-2147576 (vOTU-059419)

Viral Genome: UHGV-2147576

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2147576
vOTU ID	vOTU-059419
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029770\|Ga0168716_100736
Associated BioSample	SAMEA2737697
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9819
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	32.68
Jumbo phage	No

Genome content
Genome length (bp)	40,441
GC content	52.43%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	73
CDS density	90%
Average CDS length (bps)	499.48
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-2147576_5	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_7	phrog_4973	43.2	0.0000000000057	N/A	unknown function
Pfam	UHGV-2147576_7	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-2147576_7	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_9	phrog_7838	145.9	2.39622e-43	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2147576_9	UniRef90_A0A8D9UGW3	269.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-2147576_9	742767.HMPREF9456_02052	186.0	0	N/A	N/A
structural_annotation	UHGV-2147576_9	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_10	phrog_72	66.1	4.2e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2147576_10	UniRef90_A0A8D9PDS2	178.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-2147576_10	445972.ANACOL_01825	145.0	9.09022e-42	N/A	N/A
structural_annotation	UHGV-2147576_10	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_11	phrog_7566	91.3	6.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-2147576_11	508419.F8J187_9CAUD	103.0	1.54e-27	N/A	N/A
KOfam	UHGV-2147576_12	K03111	155.6	0	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-2147576_12	phrog_44	148.3	3.92364e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2147576_12	UniRef90_A0A1C5QDM6	206.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-2147576_12	1226322.HMPREF1545_04080	206.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-2147576_12	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-2147576_12	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-2147576_12	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-2147576_12	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2147576_12	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_13	phrog_1408	67.5	1.8e-19	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2147576_13	UniRef90_A0A417QFV0	107.0	2.66e-24	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-2147576_13	742740.HMPREF9474_03117	181.0	0	N/A	N/A
structural_annotation	UHGV-2147576_13	PF01978,NF000243,COG0735	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2147576_15	PF21485	N/A	N/A	N/A	N/A
KOfam	UHGV-2147576_17	K00571	103.7	2e-30	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-2147576_17	phrog_23224	184.9	0	DNA methyltransferase	other
UniRef90	UHGV-2147576_17	UniRef90_UPI0012DD751B	360.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-2147576_17	718252.FP2_06750	360.0	0	DNA methylase	N/A
PADLOC	UHGV-2147576_17	MTase_II_00172	94.7	1.6e-28	Type II methyltransferase	RM
Pfam	UHGV-2147576_17	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-2147576_17	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-2147576_17	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-2147576_19	K17398	85.5	3.4e-36	DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]	N/A
PHROG	UHGV-2147576_19	phrog_17284	100.9	0	N/A	unknown function
UniRef90	UHGV-2147576_19	UniRef90_UPI001EDDC2F3	676.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-2147576_19	1235797.C816_01614	443.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-2147576_19	MTase_II_00147	43.0	0.00000000000036	Type II methyltransferase	RM
Pfam	UHGV-2147576_19	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-2147576_19	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-2147576_19	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2147576_20	PF06657	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_21	phrog_38832	60.3	9.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-2147576_21	665956.HMPREF1032_00143	77.8	6.22e-16	N/A	N/A
PHROG	UHGV-2147576_26	phrog_8	44.1	0.0000000000044	transcriptional regulator	transcription regulation
UniRef90	UHGV-2147576_26	UniRef90_A0A1C6J963	109.0	7.58e-30	Helix-turn-helix	N/A
Pfam	UHGV-2147576_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2147576_26	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-2147576_26	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-2147576_27	UniRef90_UPI0009523D83	171.0	0	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-2147576_27	1226322.HMPREF1545_00042	164.0	0	N/A	N/A
structural_annotation	UHGV-2147576_27	PF13542	N/A	N/A	N/A	N/A
KOfam	UHGV-2147576_29	K06909	114.8	8.8e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2147576_29	phrog_2	116.7	3.2e-34	terminase large subunit	head and packaging
UniRef90	UHGV-2147576_29	UniRef90_A0A3D3Y0N9	416.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2147576_29	1226322.HMPREF1545_00043	393.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-2147576_29	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-2147576_29	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2147576_29	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2147576_29	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_30	phrog_533	395.4	0	portal protein	head and packaging
UniRef90	UHGV-2147576_30	UniRef90_A0A1C5N775	585.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-2147576_30	1226322.HMPREF1545_00044	552.0	0	N/A	N/A
Pfam	UHGV-2147576_30	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-2147576_30	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_32	phrog_9479	174.1	0	N/A	unknown function
eggNOG-mapper	UHGV-2147576_32	1514668.JOOA01000002_gene2680	52.0	0.00000117	N/A	N/A
structural_annotation	UHGV-2147576_32	PF15529	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_33	phrog_8680	231.2	0	N/A	unknown function
UniRef90	UHGV-2147576_33	UniRef90_A0A3R6D7I3	258.0	0	N/A	N/A
eggNOG-mapper	UHGV-2147576_33	411470.RUMGNA_02208	238.0	0	N/A	N/A
Pfam	UHGV-2147576_33	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-2147576_33	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_34	phrog_581	288.2	0	minor head protein	head and packaging
UniRef90	UHGV-2147576_34	UniRef90_UPI001D080D49	564.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-2147576_34	1226322.HMPREF1545_00046	374.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-2147576_34	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2147576_34	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2147576_34	PF06152,TIGR01641	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2147576_36	PF18152	N/A	N/A	N/A	N/A
UniRef90	UHGV-2147576_37	UniRef90_A0A6B9SU02	84.0	1.27e-16	Fibronectin autolysin	N/A
structural_annotation	UHGV-2147576_37	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_38	phrog_544	192.6	0	major head protein	head and packaging
UniRef90	UHGV-2147576_38	UniRef90_A0A810PZM2	505.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-2147576_38	1347392.CCEZ01000005_gene1236	289.0	0	N/A	N/A
structural_annotation	UHGV-2147576_38	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_39	phrog_541	105.2	3.9e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-2147576_39	642492.Clole_0822	64.3	0.0000000000317	N/A	N/A
PHROG	UHGV-2147576_40	phrog_3366	91.7	7e-27	N/A	unknown function
eggNOG-mapper	UHGV-2147576_40	1226322.HMPREF1545_00053	152.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-2147576_40	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_41	phrog_556	66.8	2.6e-19	minor head protein	head and packaging
UniRef90	UHGV-2147576_41	UniRef90_UPI00195E1497	172.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-2147576_41	1226322.HMPREF1545_00054	129.0	8.14e-37	Minor capsid protein	N/A
Pfam	UHGV-2147576_41	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-2147576_41	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_42	phrog_3266	52.6	0.0000000000000061	tail completion	connector
eggNOG-mapper	UHGV-2147576_42	1232443.BAIA02000078_gene24	142.0	2.65e-41	N/A	N/A
structural_annotation	UHGV-2147576_42	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_43	phrog_3099	98.6	6.6e-29	N/A	unknown function
eggNOG-mapper	UHGV-2147576_43	1226322.HMPREF1545_00056	245.0	0	N/A	N/A
structural_annotation	UHGV-2147576_43	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_44	phrog_11299	90.7	1.6e-26	N/A	unknown function
eggNOG-mapper	UHGV-2147576_44	693746.OBV_18160	218.0	0	N/A	N/A
structural_annotation	UHGV-2147576_44	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_45	phrog_706	125.3	4.1e-37	N/A	unknown function
UniRef90	UHGV-2147576_45	UniRef90_UPI000682A80B	228.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2147576_45	693746.OBV_18170	219.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2147576_45	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2147576_45	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_47	phrog_1535	94.5	1.2e-36	tail length tape measure protein	tail
eggNOG-mapper	UHGV-2147576_47	693746.OBV_18190	190.0	0	domain protein	N/A
COG	UHGV-2147576_47	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2147576_47	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_48	phrog_1194	56.9	3.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-2147576_48	1226322.HMPREF1545_00060	204.0	0	N/A	N/A
structural_annotation	UHGV-2147576_48	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_49	phrog_32744	714.9	0	N/A	unknown function
eggNOG-mapper	UHGV-2147576_49	1120998.AUFC01000030_gene2247	229.0	0	N/A	N/A
structural_annotation	UHGV-2147576_49	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_50	phrog_3904	74.4	7.8e-22	tail fiber protein	tail
eggNOG-mapper	UHGV-2147576_50	1519439.JPJG01000060_gene1892	58.5	0.00000355	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-2147576_50	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-2147576_51	phrog_4105	74.2	1.5e-21	N/A	unknown function
eggNOG-mapper	UHGV-2147576_51	428125.CLOLEP_01431	52.4	0.000000263	N/A	N/A
PHROG	UHGV-2147576_52	phrog_13256	70.0	1.9e-20	N/A	unknown function
eggNOG-mapper	UHGV-2147576_52	1226322.HMPREF1545_00132	72.8	3.33e-16	N/A	N/A
PHROG	UHGV-2147576_54	phrog_18955	62.2	4.6e-18	N/A	unknown function
UniRef90	UHGV-2147576_54	UniRef90_UPI00164D2830	371.0	0	phosphodiester glycosidase family protein	N/A
Pfam	UHGV-2147576_54	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-2147576_54	COG4632	N/A	N/A	Sugar-P-sugar glycosidase (uncovering enzyme, UCE), NAGPA superfamily	N/A
structural_annotation	UHGV-2147576_54	PF09992,COG4632	N/A	N/A	N/A	N/A
KOfam	UHGV-2147576_55	K08640	95.4	9.3e-28	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-2147576_55	phrog_894	99.3	4.2e-29	endolysin	lysis
UniRef90	UHGV-2147576_55	UniRef90_K1TJK4	216.0	0	Peptidase_M15_3 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-2147576_55	1235797.C816_04171	192.0	0	Peptidase M15	N/A
Pfam	UHGV-2147576_55	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-2147576_55	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2147576_55	PF05951,COG3108	N/A	N/A	N/A	N/A
Pfam	UHGV-2147576_56	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
structural_annotation	UHGV-2147576_56	PF04545,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-2147576_58	phrog_3754	112.6	2.5e-33	N/A	unknown function
eggNOG-mapper	UHGV-2147576_58	1226322.HMPREF1545_00073	166.0	0	N/A	N/A
PHROG	UHGV-2147576_59	phrog_21718	104.2	1.1e-30	N/A	unknown function
eggNOG-mapper	UHGV-2147576_59	397290.C810_05210	72.4	0.0000000000000715	N/A	N/A
PHROG	UHGV-2147576_60	phrog_22984	84.2	8.2e-25	N/A	unknown function
PHROG	UHGV-2147576_61	phrog_16490	144.9	7.84727e-44	N/A	unknown function
eggNOG-mapper	UHGV-2147576_61	1408437.JNJN01000043_gene803	151.0	1.67035e-42	N/A	N/A
PHROG	UHGV-2147576_62	phrog_20016	167.3	0	N/A	unknown function
UniRef90	UHGV-2147576_62	UniRef90_A0A2Z4QB67	161.0	0	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-2147576_62	1226322.HMPREF1545_00077	148.0	5.88545e-44	N/A	N/A
structural_annotation	UHGV-2147576_62	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2147576_63	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2147576_64	1226322.HMPREF1545_00079	93.2	2.66e-23	N/A	N/A
KOfam	UHGV-2147576_65	K06400	285.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-2147576_65	phrog_95	301.3	0	integrase	integration and excision
UniRef90	UHGV-2147576_65	UniRef90_A0A3A9ED02	348.0	0	Site-specific recombinase	N/A
eggNOG-mapper	UHGV-2147576_65	357809.Cphy_2997	296.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-2147576_65	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-2147576_65	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-2147576_65	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-2147576_65	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-2147576_66	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2147576_66	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-2147576_66	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2147576_70	NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-2147576_71	UniRef90_A0A810QCI5	67.0	0.000000000000257	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2147576_71	1514668.JOOA01000002_gene1643	53.5	0.000000165	N/A	N/A
Pfam	UHGV-2147576_71	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-2147576_71	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-2147576_71	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A