UHGV-2151477 (vOTU-072781)

Viral Genome: UHGV-2151477

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2151477
vOTU ID	vOTU-072781
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029748\|Ga0245205_1000305\|provirus_36110_70134
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	93.85 (High-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9738
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	41.14
Jumbo phage	No

Genome content
Genome length (bp)	34,025
GC content	50.96%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	52
CDS density	89%
Average CDS length (bps)	584.08
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 93.85)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-2151477_1	1268072.PSAB_10715	59.3	0.00000000485	N/A	N/A
KOfam	UHGV-2151477_2	K22300	60.8	3.3e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2151477_2	phrog_5823	55.9	5.9e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-2151477_2	UniRef90_D4LCX1	191.0	0	Predicted transcriptional regulators	N/A
eggNOG-mapper	UHGV-2151477_2	1384066.JAGT01000001_gene339	115.0	9e-32	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-2151477_2	retron_type_VI_hth_cluster2_1	54.7	0.0000000000000024	N/A	Retron
Pfam	UHGV-2151477_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2151477_2	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2151477_2	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_3	phrog_581	86.7	3.7e-25	minor head protein	head and packaging
UniRef90	UHGV-2151477_3	UniRef90_D4LE01	201.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-2151477_3	411473.RUMCAL_01925	197.0	0	N/A	N/A
Pfam	UHGV-2151477_3	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2151477_3	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2151477_4	PF12305	N/A	N/A	N/A	N/A
KOfam	UHGV-2151477_5	K07273	183.4	0	acm; lysozyme	N/A
PHROG	UHGV-2151477_5	phrog_291	136.6	1.7e-40	endolysin	lysis
UniRef90	UHGV-2151477_5	UniRef90_U2K8D9	683.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-2151477_5	411473.RUMCAL_01945	683.0	0	hydrolase, family 25	N/A
Pfam	UHGV-2151477_5	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
Pfam	UHGV-2151477_5	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-2151477_5	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-2151477_5	PF01183,PF08291,NF007557,COG3757,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_6	phrog_1129	69.2	4.4e-20	holin	lysis
UniRef90	UHGV-2151477_6	UniRef90_A0A416MDZ9	122.0	1.84e-34	Enolase	N/A
eggNOG-mapper	UHGV-2151477_6	411473.RUMCAL_01944	166.0	0	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-2151477_6	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-2151477_6	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_8	phrog_35590	369.6	0	N/A	unknown function
eggNOG-mapper	UHGV-2151477_8	411473.RUMCAL_00613	110.0	1.2e-25	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-2151477_8	COG2931	N/A	N/A	Ca2+-binding protein, RTX toxin-related	N/A
structural_annotation	UHGV-2151477_8	PF07675,NF038128	N/A	N/A	N/A	N/A
KOfam	UHGV-2151477_9	K16628	83.3	8.6e-25	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-2151477_9	phrog_25888	486.1	0	N/A	unknown function
UniRef90	UHGV-2151477_9	UniRef90_U2KR58	574.0	0	Collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-2151477_9	411473.RUMCAL_01941	574.0	0	cell adhesion	N/A
Pfam	UHGV-2151477_9	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-2151477_9	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A
structural_annotation	UHGV-2151477_9	PF10651	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2151477_10	PF14594,TIGR03361,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_12	phrog_1272	251.8	0	tail length tape measure protein	tail
UniRef90	UHGV-2151477_12	UniRef90_R7FII5	898.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-2151477_12	411473.RUMCAL_01938	900.0	0	tail tape measure protein, TP901	N/A
Pfam	UHGV-2151477_12	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-2151477_12	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-2151477_12	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_13	phrog_706	166.6	0	N/A	unknown function
UniRef90	UHGV-2151477_13	UniRef90_B0G3B6	147.0	1.51999e-41	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-2151477_13	411473.RUMCAL_01937	357.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2151477_13	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2151477_13	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_14	phrog_4450	103.3	1.9e-30	N/A	unknown function
UniRef90	UHGV-2151477_14	UniRef90_A0A355D9Y6	54.7	0.000000378	AP endonuclease	N/A
eggNOG-mapper	UHGV-2151477_14	641112.ACOK01000073_gene2902	93.6	7.07e-23	N/A	N/A
Pfam	UHGV-2151477_14	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-2151477_14	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_15	phrog_3099	184.6	0	N/A	unknown function
eggNOG-mapper	UHGV-2151477_15	411473.RUMCAL_01935	481.0	0	N/A	N/A
structural_annotation	UHGV-2151477_15	PF08813,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_16	phrog_3266	169.3	0	tail completion	connector
UniRef90	UHGV-2151477_16	UniRef90_A0A355UZ60	168.0	0	Chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-2151477_16	411473.RUMCAL_01934	303.0	0	N/A	N/A
structural_annotation	UHGV-2151477_16	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_17	phrog_556	88.1	8.1e-26	minor head protein	head and packaging
UniRef90	UHGV-2151477_17	UniRef90_A0A3C0QTS8	75.9	0.00000000000000162	Capsid protein	N/A
eggNOG-mapper	UHGV-2151477_17	1151292.QEW_4532	75.5	4.25e-16	Minor capsid protein	N/A
Pfam	UHGV-2151477_17	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-2151477_17	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_18	phrog_3366	61.2	1.7e-18	N/A	unknown function
eggNOG-mapper	UHGV-2151477_18	411473.RUMCAL_01932	225.0	0	N/A	N/A
structural_annotation	UHGV-2151477_18	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_19	phrog_541	100.2	1.5e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-2151477_19	641112.ACOK01000073_gene2896	102.0	3.3e-26	N/A	N/A
PHROG	UHGV-2151477_20	phrog_267	96.7	2.6e-28	major head protein	head and packaging
UniRef90	UHGV-2151477_20	UniRef90_A0A4P8IA69	363.0	0	Phage capsid and scaffold	N/A
eggNOG-mapper	UHGV-2151477_20	411473.RUMCAL_01930	549.0	0	N/A	N/A
structural_annotation	UHGV-2151477_20	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_21	phrog_194	56.9	4.5e-16	head scaffolding protein	head and packaging
UniRef90	UHGV-2151477_21	UniRef90_R7FEY9	322.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-2151477_21	411473.RUMCAL_01929	322.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-2151477_21	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-2151477_21	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_24	phrog_581	319.6	0	minor head protein	head and packaging
UniRef90	UHGV-2151477_24	UniRef90_U2K8C2	759.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-2151477_24	411473.RUMCAL_01925	759.0	0	N/A	N/A
Pfam	UHGV-2151477_24	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2151477_24	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2151477_24	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_25	phrog_533	327.6	0	portal protein	head and packaging
UniRef90	UHGV-2151477_25	UniRef90_U2KRP5	879.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-2151477_25	411473.RUMCAL_01924	879.0	0	N/A	N/A
structural_annotation	UHGV-2151477_25	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-2151477_26	K06909	138.9	4.90006e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2151477_26	phrog_2	166.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-2151477_26	UniRef90_U2LZ34	898.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-2151477_26	411473.RUMCAL_01923	898.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-2151477_26	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-2151477_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2151477_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2151477_26	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-2151477_27	UniRef90_W0U9H3	56.2	0.000000167	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-2151477_27	411473.RUMCAL_01921	215.0	0	N/A	N/A
KOfam	UHGV-2151477_28	K02601	54.3	0.0000000000000023	nusG; transcription termination/antitermination protein NusG	N/A
PHROG	UHGV-2151477_28	phrog_6386	132.5	2.4e-39	transcription antiterminator	transcription regulation
UniRef90	UHGV-2151477_28	UniRef90_U2K8B7	336.0	0	Transcription termination/antitermination factor NusG	N/A
eggNOG-mapper	UHGV-2151477_28	411473.RUMCAL_01920	336.0	0	Transcription termination factor nusG	N/A
Pfam	UHGV-2151477_28	PF02357	N/A	N/A	Transcription termination factor nusG	NusG
COG	UHGV-2151477_28	COG0250	N/A	N/A	Transcription termination/antitermination protein NusG	N/A
structural_annotation	UHGV-2151477_28	PF02357,MF_00951,NF033641,COG0250	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_29	phrog_426	103.3	3.2e-30	terminase small subunit	head and packaging
UniRef90	UHGV-2151477_29	UniRef90_UPI001D05DC57	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-2151477_29	411473.RUMCAL_01919	348.0	0	N/A	N/A
Pfam	UHGV-2151477_29	PF11985	N/A	N/A	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
structural_annotation	UHGV-2151477_29	PF11985	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_30	phrog_25462	185.7	0	N/A	unknown function
UniRef90	UHGV-2151477_30	UniRef90_A0A3C0QMV8	139.0	7.99006e-41	Type VI secretion protein	N/A
eggNOG-mapper	UHGV-2151477_30	411473.RUMCAL_01918	205.0	0	N/A	N/A
structural_annotation	UHGV-2151477_30	PF01638,MF_01819,NF002926,COG1733	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_31	phrog_462	63.2	2.5e-18	lipoprotein	other
eggNOG-mapper	UHGV-2151477_31	411473.RUMCAL_01917	193.0	0	N/A	N/A
PHROG	UHGV-2151477_32	phrog_532	66.9	3.4e-19	late transcriptional activator	transcription regulation
UniRef90	UHGV-2151477_32	UniRef90_U2KR36	194.0	0	Mor transcription activator family protein	N/A
eggNOG-mapper	UHGV-2151477_32	411473.RUMCAL_01916	194.0	0	Mor transcription activator	N/A
Pfam	UHGV-2151477_32	PF08765	N/A	N/A	Mor transcription activator family	Mor
COG	UHGV-2151477_32	COG5566	N/A	N/A	Transcriptional regulator, middle operon regulator (Mor) family	N/A
structural_annotation	UHGV-2151477_32	PF08765,NF040785,COG5566	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_33	phrog_286	79.3	6.2e-23	N/A	unknown function
UniRef90	UHGV-2151477_33	UniRef90_J6H7H7	105.0	1.04e-25	PF06252 family protein	N/A
eggNOG-mapper	UHGV-2151477_33	411473.RUMCAL_01915	300.0	0	N/A	N/A
Pfam	UHGV-2151477_33	PF06252	N/A	N/A	Bacteriophage Mu, GemA protein	GemA
structural_annotation	UHGV-2151477_33	PF06252	N/A	N/A	N/A	N/A
KOfam	UHGV-2151477_34	K02315	122.2	5.5e-36	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-2151477_34	phrog_50	139.2	3.20001e-41	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2151477_34	UniRef90_U2KRN6	479.0	0	IstB_IS21 domain-containing protein	N/A
eggNOG-mapper	UHGV-2151477_34	411473.RUMCAL_01914	479.0	0	N/A	N/A
Pfam	UHGV-2151477_34	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-2151477_34	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-2151477_34	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_35	phrog_270	80.2	4.2e-23	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2151477_35	UniRef90_UPI000FF705BB	68.6	0.00000000000447	phage replication protein	N/A
eggNOG-mapper	UHGV-2151477_35	411473.RUMCAL_01913	189.0	0	HNH endonuclease	N/A
COG	UHGV-2151477_35	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-2151477_36	phrog_6244	83.8	2.5e-24	N/A	unknown function
eggNOG-mapper	UHGV-2151477_36	1232453.BAIF02000002_gene1275	83.6	8.73e-20	YqaJ viral recombinase family	N/A
COG	UHGV-2151477_36	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
PHROG	UHGV-2151477_37	phrog_4292	90.1	1.1e-26	N/A	unknown function
UniRef90	UHGV-2151477_37	UniRef90_A0A7G3VS96	52.8	0.0000000565	Putative NHN endonuclease	N/A
eggNOG-mapper	UHGV-2151477_37	411473.RUMCAL_01910	119.0	4.31e-35	N/A	N/A
KOfam	UHGV-2151477_38	K07132	67.7	1.7e-19	MuB; ATP-dependent target DNA activator	N/A
PHROG	UHGV-2151477_38	phrog_296	142.7	3.20057e-42	DNA transposition protein	integration and excision
UniRef90	UHGV-2151477_38	UniRef90_R7FFF2	571.0	0	AAA domain protein	N/A
eggNOG-mapper	UHGV-2151477_38	411473.RUMCAL_01909	571.0	0	AAA domain	N/A
Pfam	UHGV-2151477_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-2151477_38	PF13401	N/A	N/A	AAA domain	AAA_22
COG	UHGV-2151477_38	COG2842	N/A	N/A	Bacteriophage DNA transposition protein, AAA+ family ATPase	N/A
structural_annotation	UHGV-2151477_38	PF13401,MF_01407,TIGR03015,COG2842	N/A	N/A	N/A	N/A
KOfam	UHGV-2151477_39	K07497	52.9	0.0000000000000068	K07497; putative transposase	N/A
PHROG	UHGV-2151477_39	phrog_310	362.8	0	transposase	integration and excision
UniRef90	UHGV-2151477_39	UniRef90_U2LZ18	1176.0	0	Integrase catalytic domain-containing protein	N/A
eggNOG-mapper	UHGV-2151477_39	411473.RUMCAL_01908	1176.0	0	Mu transposase, C-terminal	N/A
PADLOC	UHGV-2151477_39	TnsB_0_V-K	59.8	3.2e-17	TnsB_0_V-K	CRISPR-CAS
Pfam	UHGV-2151477_39	PF09039	N/A	N/A	Mu DNA binding, I gamma subdomain	HTH_Tnp_Mu_2
Pfam	UHGV-2151477_39	PF00665	N/A	N/A	Integrase core domain	rve
Pfam	UHGV-2151477_39	PF09299	N/A	N/A	Mu transposase, C-terminal	Mu-transpos_C
COG	UHGV-2151477_39	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-2151477_39	PF02914,PF09039,PF09299,PF21531,NF033594,TIGR01764,COG3316,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-2151477_43	K23779	57.5	3.5e-16	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-2151477_43	phrog_5823	47.2	0.00000000000029	transcriptional regulator	transcription regulation
UniRef90	UHGV-2151477_43	UniRef90_U2K8A4	146.0	2.24208e-44	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-2151477_43	596154.Alide2_1081	47.4	0.00000503	Helix-turn-helix domain	N/A
PADLOC	UHGV-2151477_43	retron_type_VI_hth_cluster2_1	51.7	0.000000000000025	N/A	Retron
Pfam	UHGV-2151477_43	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-2151477_43	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
UniRef90	UHGV-2151477_48	UniRef90_R7FFE5	258.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2151477_48	1160721.RBI_II00559	92.8	2.44e-21	Peptidase S24-like	N/A
Pfam	UHGV-2151477_48	PF07022	N/A	N/A	Bacteriophage CI repressor helix-turn-helix domain	Phage_CI_repr
COG	UHGV-2151477_48	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-2151477_48	PF12844,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-2151477_49	phrog_7974	46.9	0.00000000000041	N/A	unknown function
UniRef90	UHGV-2151477_49	UniRef90_R7FEW4	333.0	0	N/A	N/A
eggNOG-mapper	UHGV-2151477_49	645991.Sgly_0349	60.1	0.00000000242	N/A	N/A
eggNOG-mapper	UHGV-2151477_50	411473.RUMCAL_01929	55.1	0.000000163	Phage minor structural protein GP20	N/A