UHGV-2175282 (vOTU-062701)

Viral Genome: UHGV-2175282

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2175282
vOTU ID	vOTU-062701
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300029843\|Ga0245274_100004\|provirus_364516_418863
Associated BioSample	SAMEA3449325
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	93.25 (High-quality)
Trimmed provirus	Yes
CheckV viral markers	20
CheckV host markers	7
Recoded stop codon	No

Viral Content
geNomad score	0.9688
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	39.7
Jumbo phage	No

Genome content
Genome length (bp)	33,027
GC content	44.75%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	46
CDS density	94%
Average CDS length (bps)	671.74
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 93.25)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2175282_1	phrog_16255	71.1	1.6e-20	N/A	unknown function
UniRef90	UHGV-2175282_1	UniRef90_UPI0003F7F860	242.0	0	RloB family protein	N/A
eggNOG-mapper	UHGV-2175282_1	1280664.AUIX01000019_gene2692	242.0	0	RloB-like protein	N/A
PADLOC	UHGV-2175282_1	AbiLii-1	77.7	5.1e-22	AbiLii	Abi
Pfam	UHGV-2175282_1	PF13707	N/A	N/A	RloB-like protein	RloB
structural_annotation	UHGV-2175282_1	PF13707,COG1731	N/A	N/A	N/A	N/A
KOfam	UHGV-2175282_2	K06926	355.0	0	N/A	N/A
PHROG	UHGV-2175282_2	phrog_5836	191.7	0	N/A	unknown function
UniRef90	UHGV-2175282_2	UniRef90_W7UPE2	605.0	0	Abortive phage infection protein	N/A
eggNOG-mapper	UHGV-2175282_2	1280664.AUIX01000019_gene2691	609.0	0	AAA domain, putative AbiEii toxin, Type IV TA system	N/A
PADLOC	UHGV-2175282_2	AbiLi-1	300.5	0	AbiLi	Abi
Pfam	UHGV-2175282_2	PF13304	N/A	N/A	AAA domain, putative AbiEii toxin, Type IV TA system	AAA_21
COG	UHGV-2175282_2	COG1106	N/A	N/A	ATPase/GTPase, AAA15 family	N/A
structural_annotation	UHGV-2175282_2	PF13304,MF_00365,NF041760,COG4637	N/A	N/A	N/A	N/A
KOfam	UHGV-2175282_3	K07273	218.7	0	acm; lysozyme	N/A
PHROG	UHGV-2175282_3	phrog_291	187.2	0	endolysin	lysis
UniRef90	UHGV-2175282_3	UniRef90_A0A1C6IMI8	509.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-2175282_3	246199.CUS_5914	299.0	0	hydrolase, family 25	N/A
Pfam	UHGV-2175282_3	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-2175282_3	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-2175282_3	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-2175282_3	PF01183,PF01476,TIGR02899,COG3757,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_4	phrog_1863	58.3	3.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-2175282_4	1226322.HMPREF1545_04027	71.6	0.00000000000000223	N/A	N/A
PHROG	UHGV-2175282_5	phrog_13256	79.3	2.6e-23	N/A	unknown function
eggNOG-mapper	UHGV-2175282_5	1160721.RBI_II00522	92.0	5.15e-24	N/A	N/A
PHROG	UHGV-2175282_6	phrog_134	41.8	0.000000000015	N/A	unknown function
UniRef90	UHGV-2175282_6	UniRef90_A0A373VFP4	101.0	2.76e-27	XkdX family protein	N/A
eggNOG-mapper	UHGV-2175282_6	1298920.KI911353_gene543	58.5	0.0000000000357	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-2175282_6	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-2175282_6	PF09693,TIGR01669	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2175282_8	1410617.JHXH01000006_gene232	85.9	0.00000000000000634	N/A	N/A
structural_annotation	UHGV-2175282_8	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_10	phrog_9680	50.9	9.8e-16	host range and adsorption protein	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-2175282_10	1160721.RBI_II00526	511.0	0	N/A	N/A
structural_annotation	UHGV-2175282_10	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_11	phrog_1194	89.7	2.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-2175282_11	1160721.RBI_II00527	207.0	0	N/A	N/A
structural_annotation	UHGV-2175282_11	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_12	phrog_1535	594.6	0	tail length tape measure protein	tail
UniRef90	UHGV-2175282_12	UniRef90_R6TDK7	713.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-2175282_12	1160721.RBI_II00528	456.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-2175282_12	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
structural_annotation	UHGV-2175282_12	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_13	phrog_706	147.6	6.86636e-44	N/A	unknown function
UniRef90	UHGV-2175282_13	UniRef90_UPI001B3C82AE	216.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2175282_13	1449050.JNLE01000003_gene3882	199.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2175282_13	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2175282_13	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_14	phrog_11299	177.3	0	N/A	unknown function
eggNOG-mapper	UHGV-2175282_14	411471.SUBVAR_06935	53.9	0.0000034	N/A	N/A
structural_annotation	UHGV-2175282_14	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_15	phrog_3099	147.4	6.86636e-44	N/A	unknown function
eggNOG-mapper	UHGV-2175282_15	1160721.RBI_II00532	206.0	0	N/A	N/A
structural_annotation	UHGV-2175282_15	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_16	phrog_3266	123.3	1.1e-36	tail completion	connector
eggNOG-mapper	UHGV-2175282_16	411902.CLOBOL_00130	112.0	1.53e-29	N/A	N/A
structural_annotation	UHGV-2175282_16	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_17	phrog_556	123.7	6.3e-37	minor head protein	head and packaging
UniRef90	UHGV-2175282_17	UniRef90_UPI00143BEF55	125.0	3.43e-34	minor capsid protein	N/A
eggNOG-mapper	UHGV-2175282_17	1449050.JNLE01000003_gene3886	107.0	6.37e-28	N/A	N/A
Pfam	UHGV-2175282_17	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-2175282_17	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_18	phrog_3366	72.4	5.9e-22	N/A	unknown function
eggNOG-mapper	UHGV-2175282_18	1449050.JNLE01000003_gene3887	85.1	9.61e-20	N/A	N/A
Pfam	UHGV-2175282_18	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-2175282_18	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_19	phrog_541	92.7	3.1e-27	head-tail adaptor	connector
UniRef90	UHGV-2175282_19	UniRef90_A0A371AQT0	102.0	7.06e-26	N/A	N/A
eggNOG-mapper	UHGV-2175282_19	1304866.K413DRAFT_3039	95.5	9.97e-24	N/A	N/A
PHROG	UHGV-2175282_20	phrog_544	344.5	0	major head protein	head and packaging
UniRef90	UHGV-2175282_20	UniRef90_R6T873	664.0	0	Major head protein	N/A
eggNOG-mapper	UHGV-2175282_20	936580.HMPREF1516_0718	312.0	0	N/A	N/A
NCBIFam	UHGV-2175282_20	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-2175282_20	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_21	phrog_194	101.9	7.2e-30	head scaffolding protein	head and packaging
UniRef90	UHGV-2175282_21	UniRef90_R6U550	377.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-2175282_21	742765.HMPREF9457_02126	154.0	8.40779e-45	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-2175282_21	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-2175282_21	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2175282_22	PF12305	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_23	phrog_581	331.9	0	minor head protein	head and packaging
UniRef90	UHGV-2175282_23	UniRef90_R6SXL7	989.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-2175282_23	658655.HMPREF0988_02563	410.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-2175282_23	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2175282_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2175282_23	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_24	phrog_533	347.1	0	portal protein	head and packaging
UniRef90	UHGV-2175282_24	UniRef90_R6TDI6	893.0	0	Phage portal protein SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-2175282_24	1304866.K413DRAFT_3035	439.0	0	N/A	N/A
structural_annotation	UHGV-2175282_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-2175282_25	K06909	417.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2175282_25	phrog_18557	160.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-2175282_25	UniRef90_A0A1C6IMR2	1091.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-2175282_25	411461.DORFOR_01162	665.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-2175282_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-2175282_25	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-2175282_25	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2175282_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2175282_25	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_28	phrog_36	60.4	3.5e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-2175282_28	UniRef90_A0A371AT86	57.0	0.000000213	N/A	N/A
COG	UHGV-2175282_28	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
KOfam	UHGV-2175282_30	K06919	110.8	1.2e-32	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-2175282_30	phrog_1829	852.3	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2175282_30	UniRef90_A0A356CZ91	1540.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-2175282_30	1410670.JHXF01000015_gene2274	847.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-2175282_30	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-2175282_30	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-2175282_30	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-2175282_30	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-2175282_30	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-2175282_30	PF08706,PF05272,PF02257,MF_04000,NF011296,COG3378,COG4983	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_31	phrog_378	99.1	5.6e-29	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2175282_31	UniRef90_A0A373SL44	371.0	0	N/A	N/A
eggNOG-mapper	UHGV-2175282_31	1423807.BACO01000050_gene1454	78.2	0.00000000000000164	N/A	N/A
Pfam	UHGV-2175282_31	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-2175282_31	PF05037,NF004948	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_32	phrog_5702	78.9	3e-23	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2175282_32	UniRef90_A0A373SNE0	208.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-2175282_32	1410670.JHXF01000015_gene2271	147.0	1.26117e-44	VRR_NUC	N/A
Pfam	UHGV-2175282_32	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-2175282_32	PF03838,MF_00130,NF002585,COG3331	N/A	N/A	N/A	N/A
KOfam	UHGV-2175282_33	K19789	326.5	0	radD; DNA repair protein RadD	N/A
PHROG	UHGV-2175282_33	phrog_16	279.3	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2175282_33	UniRef90_A0A356CZA9	902.0	0	Helicase	N/A
eggNOG-mapper	UHGV-2175282_33	1410670.JHXF01000015_gene2270	590.0	0	helicase	N/A
PADLOC	UHGV-2175282_33	mREase_IV_00005	103.8	3.2e-31	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-2175282_33	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-2175282_33	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-2175282_33	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-2175282_33	PF04851,PF00271,MF_01489,TIGR04095,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_34	phrog_2872	245.7	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2175282_34	UniRef90_A0A373VPJ3	394.0	0	ATP-binding protein (Fragment)	N/A
eggNOG-mapper	UHGV-2175282_34	754027.HMPREF9554_00709	219.0	0	N/A	N/A
Pfam	UHGV-2175282_34	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-2175282_34	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_35	phrog_253	112.8	2.5e-33	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2175282_35	UniRef90_UPI0019171ADA	118.0	2.72e-30	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-2175282_35	881621.LIV_2167	75.1	0.0000000000000118	Siphovirus Gp157	N/A
Pfam	UHGV-2175282_35	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-2175282_35	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_36	phrog_15609	86.3	1.5e-25	N/A	unknown function
UniRef90	UHGV-2175282_36	UniRef90_A0A373SLQ6	456.0	0	N/A	N/A
eggNOG-mapper	UHGV-2175282_36	641112.ACOK01000073_gene2872	108.0	4.85e-25	N/A	N/A
structural_annotation	UHGV-2175282_36	PF11300,NF033725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2175282_42	PF11372	N/A	N/A	N/A	N/A
PHROG	UHGV-2175282_44	phrog_750	74.9	7e-22	N/A	unknown function
eggNOG-mapper	UHGV-2175282_44	742723.HMPREF9477_00931	100.0	3.14e-26	N/A	N/A
structural_annotation	UHGV-2175282_44	PF13835,NF040858	N/A	N/A	N/A	N/A
UniRef90	UHGV-2175282_46	UniRef90_A0A373VPI4	135.0	1.72e-40	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2175282_46	1292035.H476_1036	54.7	0.00000000423	N/A	N/A
structural_annotation	UHGV-2175282_46	PF05339,NF041951,COG1396	N/A	N/A	N/A	N/A