UHGV-2198907 (vOTU-039764)

Viral Genome: UHGV-2198907

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2198907
vOTU ID	vOTU-039764
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	3300039367\|Ga0169600_00453
Associated BioSample	SAMEA2580019
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	51.63 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9824
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	23.85
Jumbo phage	No

Genome content
Genome length (bp)	18,387
GC content	48.89%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	23
CDS density	98%
Average CDS length (bps)	780.65
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 51.63)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-2198907_1	1094508.Tsac_2409	52.0	0.00000224	N/A	N/A
KOfam	UHGV-2198907_3	K07273	179.1	0	acm; lysozyme	N/A
PHROG	UHGV-2198907_3	phrog_291	148.3	5.46506e-44	endolysin	lysis
UniRef90	UHGV-2198907_3	UniRef90_A0A3D0PUA7	336.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-2198907_3	1105031.HMPREF1141_1412	214.0	0	family 25	N/A
Pfam	UHGV-2198907_3	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-2198907_3	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
eggNOG-mapper	UHGV-2198907_4	632245.CLP_1663	55.1	0.00000619	nuclear chromosome segregation	N/A
COG	UHGV-2198907_4	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-2198907_5	phrog_7389	71.2	1e-20	tail fiber protein	tail
eggNOG-mapper	UHGV-2198907_5	742738.HMPREF9460_03963	147.0	3.70994e-41	tail collar domain protein	N/A
Pfam	UHGV-2198907_5	PF18454	N/A	N/A	Major tropism determinant N-terminal domain	Mtd_N
COG	UHGV-2198907_5	COG4675	N/A	N/A	Phage tail collar domain	N/A
COG	UHGV-2198907_6	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A
PHROG	UHGV-2198907_7	phrog_1067	411.4	0	minor head protein	head and packaging
UniRef90	UHGV-2198907_7	UniRef90_UPI00073EA371	442.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-2198907_7	1160721.RBI_I01574	393.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-2198907_7	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-2198907_7	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-2198907_7	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-2198907_7	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-2198907_8	phrog_33	76.7	5.2e-22	distal tail protein Dit	tail
UniRef90	UHGV-2198907_8	UniRef90_UPI00164BA811	181.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-2198907_8	1443125.Z962_p0065	110.0	4.64e-27	phage tail	N/A
COG	UHGV-2198907_8	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-2198907_8	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-2198907_9	phrog_1533	489.1	0	tail length tape measure protein	tail
UniRef90	UHGV-2198907_9	UniRef90_R5TQ69	474.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-2198907_9	903814.ELI_1307	398.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-2198907_9	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-2198907_9	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-2198907_9	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-2198907_9	PF10145,MF_04138,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-2198907_10	phrog_3033	42.9	0.000000000007	N/A	unknown function
eggNOG-mapper	UHGV-2198907_10	483218.BACPEC_01316	48.9	0.000000153	N/A	N/A
PHROG	UHGV-2198907_11	phrog_709	102.8	2.4e-30	N/A	unknown function
eggNOG-mapper	UHGV-2198907_11	742741.HMPREF9475_02368	124.0	3.31e-35	N/A	N/A
structural_annotation	UHGV-2198907_11	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-2198907_12	phrog_88	165.9	0	major tail protein	tail
UniRef90	UHGV-2198907_12	UniRef90_U2R3I9	248.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-2198907_12	1226322.HMPREF1545_00121	248.0	0	phage major tail protein, phi13 family	N/A
Pfam	UHGV-2198907_12	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
NCBIFam	UHGV-2198907_12	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-2198907_12	PF06488,PF18316,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-2198907_13	UniRef90_U2SBX3	104.0	4.9e-27	HTH merR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2198907_13	1226322.HMPREF1545_00120	104.0	8.22e-28	N/A	N/A
structural_annotation	UHGV-2198907_13	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-2198907_14	phrog_5	57.5	3.7e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-2198907_14	UniRef90_UPI001E359353	118.0	1.32e-31	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-2198907_14	411471.SUBVAR_05855	105.0	2.41e-27	N/A	N/A
Pfam	UHGV-2198907_14	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-2198907_14	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-2198907_15	phrog_1951	104.0	7.4e-31	head-tail adaptor	connector
UniRef90	UHGV-2198907_15	UniRef90_A0A7X9GK78	115.0	1.73e-31	Phage head closure protein	N/A
eggNOG-mapper	UHGV-2198907_15	887929.HMP0721_1263	95.1	3.23e-24	N/A	N/A
NCBIFam	UHGV-2198907_15	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-2198907_15	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2198907_16	phrog_5223	79.5	2.5e-23	neck protein	connector
UniRef90	UHGV-2198907_16	UniRef90_A0A3B8U278	99.4	2.62e-25	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-2198907_16	573061.Clocel_2435	72.4	0.00000000000000189	N/A	N/A
NCBIFam	UHGV-2198907_16	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
PHROG	UHGV-2198907_17	phrog_28766	55.9	3.6e-16	tail fiber protein	tail
PHROG	UHGV-2198907_18	phrog_10	135.7	4.3e-40	major head protein	head and packaging
UniRef90	UHGV-2198907_18	UniRef90_UPI00073E62C9	367.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-2198907_18	626523.GCWU000342_01025	357.0	0	Phage capsid family	N/A
Pfam	UHGV-2198907_18	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-2198907_18	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-2198907_18	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-2198907_18	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-2198907_19	K01358	124.4	1.3e-36	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-2198907_19	phrog_94	190.6	0	head maturation protease	head and packaging
UniRef90	UHGV-2198907_19	UniRef90_U4R420	233.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-2198907_19	1203606.HMPREF1526_00979	212.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-2198907_19	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-2198907_19	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-2198907_19	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-2198907_20	phrog_12	171.0	0	portal protein	head and packaging
UniRef90	UHGV-2198907_20	UniRef90_A0A3B8U1I5	564.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-2198907_20	626523.GCWU000342_01027	519.0	0	Portal protein	N/A
Pfam	UHGV-2198907_20	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-2198907_20	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-2198907_20	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-2198907_21	phrog_9	371.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-2198907_21	UniRef90_C4GAS7	834.0	0	Putative phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-2198907_21	626523.GCWU000342_01028	834.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-2198907_21	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-2198907_21	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-2198907_21	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-2198907_21	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-2198907_22	phrog_1066	79.6	3e-23	N/A	unknown function
eggNOG-mapper	UHGV-2198907_22	1123263.AUKY01000046_gene465	73.2	0.0000000000000054	N/A	N/A
structural_annotation	UHGV-2198907_22	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-2198907_23	K07451	41.0	0.000000000033	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-2198907_23	phrog_119	47.8	0.00000000000018	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2198907_23	UniRef90_D9SQ19	111.0	1.35e-29	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-2198907_23	573061.Clocel_2442	111.0	2.26e-30	HNH endonuclease	N/A
COG	UHGV-2198907_23	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A