UHGV-2234835 (vOTU-116581)

Viral Genome: UHGV-2234835

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-2234835
vOTU ID	vOTU-116581
Representative Genome?	Yes
Source	IMGVR4
Original genome ID	7000000334\|SRS015217_WUGC_scaffold_8726
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	69.13 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9828
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	21.14
Jumbo phage	No

Genome content
Genome length (bp)	31,164
GC content	42.51%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	52
CDS density	90%
Average CDS length (bps)	538.10
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 69.13)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2234835_1	phrog_6616	427.6	0	tail protein	tail
UniRef90	UHGV-2234835_1	UniRef90_A0A395X7B3	910.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-2234835_1	33035.JPJF01000043_gene1002	238.0	0	N/A	N/A
structural_annotation	UHGV-2234835_1	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2234835_2	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2234835_3	phrog_1535	422.3	0	tail length tape measure protein	tail
UniRef90	UHGV-2234835_3	UniRef90_A0A173R880	514.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-2234835_3	476272.RUMHYD_01785	520.0	0	phage tail tape measure protein	N/A
COG	UHGV-2234835_3	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2234835_3	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-2234835_4	phrog_706	132.5	2.8e-39	N/A	unknown function
UniRef90	UHGV-2234835_4	UniRef90_UPI001BAD00AD	214.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2234835_4	411459.RUMOBE_01383	345.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2234835_4	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2234835_4	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2234835_5	phrog_11299	70.9	1.9e-20	N/A	unknown function
eggNOG-mapper	UHGV-2234835_5	33035.JPJF01000106_gene3125	62.4	0.00000000021	N/A	N/A
structural_annotation	UHGV-2234835_5	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-2234835_6	phrog_3099	132.3	2.9e-39	N/A	unknown function
eggNOG-mapper	UHGV-2234835_6	411902.CLOBOL_00129	170.0	0	N/A	N/A
structural_annotation	UHGV-2234835_6	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2234835_7	phrog_3266	92.6	3.1e-27	tail completion	connector
eggNOG-mapper	UHGV-2234835_7	476272.RUMHYD_01781	150.0	4.48416e-44	N/A	N/A
structural_annotation	UHGV-2234835_7	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2234835_8	phrog_556	54.7	1.6e-16	minor head protein	head and packaging
UniRef90	UHGV-2234835_8	UniRef90_UPI000E4989EB	277.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-2234835_8	476272.RUMHYD_01780	148.0	1.16308e-43	N/A	N/A
structural_annotation	UHGV-2234835_8	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-2234835_9	phrog_3366	103.8	1.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-2234835_9	476272.RUMHYD_01779	153.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-2234835_9	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2234835_10	phrog_1129	74.6	8.8e-22	holin	lysis
UniRef90	UHGV-2234835_10	UniRef90_A0A395X7B2	172.0	0	Enolase	N/A
eggNOG-mapper	UHGV-2234835_10	411461.DORFOR_00721	113.0	6.91e-32	N/A	N/A
Pfam	UHGV-2234835_10	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-2234835_10	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-2234835_11	phrog_1233	78.5	9.8e-23	N/A	unknown function
eggNOG-mapper	UHGV-2234835_11	1256908.HMPREF0373_00487	79.0	1.47e-17	N/A	N/A
structural_annotation	UHGV-2234835_11	PF13058	N/A	N/A	N/A	N/A
PHROG	UHGV-2234835_12	phrog_541	97.4	7.6e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-2234835_12	476272.RUMHYD_01778	115.0	1.61e-30	N/A	N/A
PHROG	UHGV-2234835_13	phrog_544	164.2	0	major head protein	head and packaging
UniRef90	UHGV-2234835_13	UniRef90_A0A395X7A1	662.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-2234835_13	1232453.BAIF02000011_gene3359	386.0	0	N/A	N/A
Pfam	UHGV-2234835_13	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-2234835_13	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2234835_14	phrog_194	67.0	3.7e-19	head scaffolding protein	head and packaging
UniRef90	UHGV-2234835_14	UniRef90_UPI001D14C9C8	182.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-2234835_14	476272.RUMHYD_01775	197.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-2234835_14	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-2234835_14	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2234835_15	phrog_28802	224.5	0	N/A	unknown function
eggNOG-mapper	UHGV-2234835_15	476272.RUMHYD_01772	199.0	0	N/A	N/A
PHROG	UHGV-2234835_16	phrog_20016	207.5	0	N/A	unknown function
UniRef90	UHGV-2234835_16	UniRef90_A0A285PT46	170.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-2234835_16	397290.C810_05214	187.0	0	N/A	N/A
structural_annotation	UHGV-2234835_16	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-2234835_17	phrog_16490	191.9	0	N/A	unknown function
eggNOG-mapper	UHGV-2234835_17	397290.C810_01328	189.0	0	N/A	N/A
PHROG	UHGV-2234835_18	phrog_22984	95.1	4.1e-28	N/A	unknown function
PHROG	UHGV-2234835_19	phrog_21718	133.8	7.4e-40	N/A	unknown function
eggNOG-mapper	UHGV-2234835_19	476272.RUMHYD_01768	130.0	1.6e-36	N/A	N/A
AcrCatalog	UHGV-2234835_20	cluster_37488	65.5	4.21e-17	NA	N/A
UniRef90	UHGV-2234835_21	UniRef90_S2ZLJ4	75.5	0.00000000000000337	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2234835_21	411470.RUMGNA_03786	75.1	0.00000000000000112	Helix-turn-helix XRE-family like proteins	N/A
COG	UHGV-2234835_21	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2234835_22	TIGR02096	N/A	N/A	N/A	N/A
KOfam	UHGV-2234835_23	K07726	46.0	0.00000000000087	K07726; putative transcriptional regulator	N/A
PHROG	UHGV-2234835_23	phrog_2104	44.4	0.0000000000027	N/A	unknown function
UniRef90	UHGV-2234835_23	UniRef90_A0A412ELA1	108.0	2.98e-30	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2234835_23	679200.HMPREF9333_02253	72.0	2.55e-16	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-2234835_23	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2234835_23	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-2234835_23	PF01381,NF040522,COG2944	N/A	N/A	N/A	N/A
UniRef90	UHGV-2234835_24	UniRef90_A0A395X7A4	171.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-2234835_24	476272.RUMHYD_01766	121.0	1.07e-34	N/A	N/A
PHROG	UHGV-2234835_25	phrog_3754	116.7	1.4e-34	N/A	unknown function
eggNOG-mapper	UHGV-2234835_25	476272.RUMHYD_01764	174.0	0	N/A	N/A
PHROG	UHGV-2234835_26	phrog_581	278.3	0	minor head protein	head and packaging
UniRef90	UHGV-2234835_26	UniRef90_A0A412EKN3	793.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-2234835_26	33035.JPJF01000106_gene3134	344.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-2234835_26	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2234835_26	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2234835_26	PF06152	N/A	N/A	N/A	N/A
UniRef90	UHGV-2234835_27	UniRef90_UPI0013141798	68.2	0.0000000000000366	ribbon-helix-helix protein, CopG family	N/A
structural_annotation	UHGV-2234835_27	PF01402,NF041793,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-2234835_28	phrog_533	273.2	0	portal protein	head and packaging
UniRef90	UHGV-2234835_28	UniRef90_A0A1C6CDM8	648.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-2234835_28	33035.JPJF01000106_gene3135	488.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-2234835_28	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-2234835_30	K06909	333.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2234835_30	phrog_3717	165.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-2234835_30	UniRef90_A0A395X9V4	805.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2234835_30	397291.C804_01612	414.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-2234835_30	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-2234835_30	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2234835_30	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2234835_30	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2234835_31	phrog_606	81.6	1.1e-23	terminase small subunit	head and packaging
UniRef90	UHGV-2234835_31	UniRef90_UPI001F487344	165.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-2234835_31	397290.C810_05185	174.0	0	DNA-packaging protein gp3	N/A
Pfam	UHGV-2234835_31	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-2234835_31	PF16677	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2234835_33	397290.C810_05184	59.3	0.000000000838	N/A	N/A
PHROG	UHGV-2234835_36	phrog_8684	85.2	2.1e-25	N/A	unknown function
UniRef90	UHGV-2234835_36	UniRef90_A0A2V2D5P6	196.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-2234835_36	457412.RSAG_01162	83.2	3.45e-18	YopX protein	N/A
Pfam	UHGV-2234835_36	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-2234835_36	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-2234835_36	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-2234835_38	phrog_20593	51.2	0.000000000000005	N/A	unknown function
UniRef90	UHGV-2234835_39	UniRef90_R7QYD6	84.3	3.08e-19	DNA-directed RNA polymerase subunit alpha	N/A
eggNOG-mapper	UHGV-2234835_39	1232449.BAHV02000010_gene2470	57.0	0.0000000391	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	N/A
Pfam	UHGV-2234835_39	PF03118	N/A	N/A	Bacterial RNA polymerase, alpha chain C terminal domain	RNA_pol_A_CTD
COG	UHGV-2234835_39	COG0202	N/A	N/A	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	N/A
structural_annotation	UHGV-2234835_39	PF03118,NF005841	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2234835_40	476272.RUMHYD_01751	49.3	0.00000322	N/A	N/A
AcrCatalog	UHGV-2234835_40	cluster_11670	42.7	0.0000000431	NA	N/A
PHROG	UHGV-2234835_42	phrog_15198	52.0	0.0000000000000046	N/A	unknown function
UniRef90	UHGV-2234835_42	UniRef90_UPI001D099705	258.0	0	N/A	N/A
eggNOG-mapper	UHGV-2234835_42	658655.HMPREF0988_00863	50.4	0.00000852	N/A	N/A
Pfam	UHGV-2234835_42	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-2234835_43	phrog_4601	50.0	0.000000000000016	N/A	unknown function
eggNOG-mapper	UHGV-2234835_44	1298920.KI911353_gene4863	67.0	0.0000000000161	N/A	N/A
UniRef90	UHGV-2234835_45	UniRef90_A0A173WN74	311.0	0	Sigma-70, region 4	N/A
Pfam	UHGV-2234835_45	PF18024	N/A	N/A	Helix-turn-helix domain	HTH_50
Pfam	UHGV-2234835_45	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-2234835_45	PF01710,NF040595	N/A	N/A	N/A	N/A
PHROG	UHGV-2234835_47	phrog_23707	81.0	6e-24	N/A	unknown function
UniRef90	UHGV-2234835_47	UniRef90_UPI00156E1A02	132.0	1.07e-38	alanine racemase	N/A
eggNOG-mapper	UHGV-2234835_47	411483.FAEPRAA2165_01889	65.5	0.00000000000517	N/A	N/A
PHROG	UHGV-2234835_48	phrog_7566	98.2	1.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-2234835_48	411459.RUMOBE_00948	222.0	0	N/A	N/A
eggNOG-mapper	UHGV-2234835_49	1298920.KI911353_gene4860	61.2	0.000000000207	N/A	N/A
KOfam	UHGV-2234835_50	K03497	70.5	1.3e-20	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-2234835_50	phrog_15077	155.2	0	N/A	unknown function
UniRef90	UHGV-2234835_50	UniRef90_UPI0009306E3C	1070.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-2234835_50	1235792.C808_00610	181.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-2234835_50	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-2234835_50	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-2234835_50	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-2234835_51	K03496	197.1	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-2234835_51	phrog_164	164.1	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2234835_51	UniRef90_A0A1C5REE7	506.0	0	Sporulation initiation inhibitor protein soj	N/A
eggNOG-mapper	UHGV-2234835_51	97139.C824_00725	270.0	0	Cellulose biosynthesis protein BcsQ	N/A
Pfam	UHGV-2234835_51	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-2234835_51	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-2234835_51	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
UniRef90	UHGV-2234835_52	UniRef90_A0A1C5RDL1	215.0	0	Ribonuclease H	N/A
eggNOG-mapper	UHGV-2234835_52	411461.DORFOR_01140	49.3	0.00000715	RNA-DNA hybrid ribonuclease activity	N/A
COG	UHGV-2234835_52	COG0328	N/A	N/A	Ribonuclease HI	N/A