vOTU vOTU-000277

vOTU: vOTU-000277

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-000277
Number of genomes	68
Taxonomy (ICTV)	Bacteria → Firmicutes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-03082 → vGENUS-04213 → vSUBGEN-26776 → vOTU-000277
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Faecalibacillus → Faecalibacillus intestinalis
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1361658
Biosample ID	SAMEA2737759
Genome length (bp)	47,501 bps
CheckV completeness	100.00% (Complete)
CDS count	75
CDS density	91.21%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Faecalibacillus → Faecalibacillus intestinalis	Total connections	334	Host agreement	92.51
PHIST-predicted host lineage	Bacteria → Firmicutes	Total connections	5	Host agreement	60

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1361658_1	K07491	70.0	5.7e-20	rayT; REP-associated tyrosine transposase	N/A
PHROG	UHGV-1361658_1	phrog_2577	144.0	4.30199e-43	transposase	integration and excision
UniRef90	UHGV-1361658_1	UniRef90_A0A416Y0G1	271.0	0	IS200/IS605 family transposase	N/A
eggNOG-mapper	UHGV-1361658_1	1282887.AUJG01000011_gene2283	230.0	0	PFAM transposase IS200-family protein	N/A
Pfam	UHGV-1361658_1	PF01797	N/A	N/A	Transposase IS200 like	Y1_Tnp
NCBIFam	UHGV-1361658_1	NF033573.1	N/A	N/A	IS200/IS605 family transposase	N/A
COG	UHGV-1361658_1	COG1943	N/A	N/A	REP element-mobilizing transposase RayT	N/A
KOfam	UHGV-1361658_2	K07496	326.2	0	K07496; putative transposase	N/A
PHROG	UHGV-1361658_2	phrog_506	336.7	0	transposase	integration and excision
UniRef90	UHGV-1361658_2	UniRef90_A0A417IK71	754.0	0	Transposase	N/A
eggNOG-mapper	UHGV-1361658_2	1504823.CCMM01000005_gene146	753.0	0	Transposase, IS605 OrfB family	N/A
PADLOC	UHGV-1361658_2	Type_V_V_U4	140.0	1.96182e-44	Cas12	CRISPR-CAS
Pfam	UHGV-1361658_2	PF12323	N/A	N/A	Helix-turn-helix domain	HTH_OrfB_IS605
Pfam	UHGV-1361658_2	PF01385	N/A	N/A	Probable transposase	OrfB_IS605
Pfam	UHGV-1361658_2	PF07282	N/A	N/A	Putative transposase DNA-binding domain	OrfB_Zn_ribbon
NCBIFam	UHGV-1361658_2	NF040570.1	N/A	N/A	RNA-guided endonuclease TnpB family protein	N/A
COG	UHGV-1361658_2	COG0675	N/A	N/A	Transposase	N/A
structural_annotation	UHGV-1361658_2	PF07282,PF01385,NF038281,COG0675	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1361658_4	1232446.BAIE02000041_gene2433	64.7	0.0000000000547	N/A	N/A
Pfam	UHGV-1361658_6	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1361658_6	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-1361658_9	phrog_21575	43.1	0.0000000000056	N/A	unknown function
PHROG	UHGV-1361658_11	phrog_374	181.9	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1361658_11	1460635.JCM19038_3433	166.0	0	N/A	N/A
PHROG	UHGV-1361658_13	phrog_1233	76.8	3.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-1361658_13	476272.RUMHYD_01960	103.0	6.96e-27	N/A	N/A
PHROG	UHGV-1361658_17	phrog_38	174.0	0	terminase large subunit	head and packaging
eggNOG-mapper	UHGV-1361658_17	476272.RUMHYD_01940	335.0	0	TIGRFAM Phage	N/A
COG	UHGV-1361658_17	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361658_17	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1361658_18	phrog_64	202.4	0	portal protein	head and packaging
UniRef90	UHGV-1361658_18	UniRef90_UPI001BAB50B9	288.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1361658_18	1121866.AUGK01000003_gene1429	192.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1361658_18	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1361658_18	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1361658_20	phrog_1328	128.2	5.3e-38	major head protein	head and packaging
UniRef90	UHGV-1361658_20	UniRef90_UPI00164DD2D5	269.0	0	N/A	N/A
eggNOG-mapper	UHGV-1361658_20	398512.JQKC01000052_gene2672	206.0	0	N/A	N/A
Pfam	UHGV-1361658_20	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-1361658_20	PF17236,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1361658_21	UniRef90_A0A3D4KY33	70.1	0.000000000000175	DNA-packaging protein	N/A
Pfam	UHGV-1361658_21	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1361658_22	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361658_24	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1361658_25	1121333.JMLH01000047_gene1013	65.1	0.0000000000323	N/A	N/A
structural_annotation	UHGV-1361658_25	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1361658_28	phrog_1533	143.6	3.92364e-44	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1361658_28	1121866.AUGK01000003_gene1437	172.0	7.19006e-41	phage tail tape measure protein	N/A
COG	UHGV-1361658_28	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-1361658_29	phrog_1194	68.3	1.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-1361658_29	742740.HMPREF9474_03515	103.0	1.11e-26	N/A	N/A
structural_annotation	UHGV-1361658_29	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1361658_30	phrog_13879	73.9	1e-34	N/A	unknown function
eggNOG-mapper	UHGV-1361658_30	742740.HMPREF9474_03516	126.0	3.89e-27	N/A	N/A
structural_annotation	UHGV-1361658_30	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1361658_31	742740.HMPREF9474_03517	51.6	0.00000257	N/A	N/A
structural_annotation	UHGV-1361658_32	PF18463	N/A	N/A	N/A	N/A
PHROG	UHGV-1361658_34	phrog_9233	81.1	1.4e-23	holin	lysis
UniRef90	UHGV-1361658_34	UniRef90_A0A4Q7P349	117.0	3.04e-33	Dp-1 family holin	N/A
eggNOG-mapper	UHGV-1361658_34	742740.HMPREF9474_02251	114.0	6.48e-33	Putative phage holin Dp-1	N/A
Pfam	UHGV-1361658_34	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-1361658_34	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-1361658_35	phrog_14030	124.3	8.1e-37	N/A	unknown function
UniRef90	UHGV-1361658_35	UniRef90_A0A2A7MEX2	234.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-1361658_35	641107.CDLVIII_3774	226.0	0	Bacteriophage peptidoglycan hydrolase	N/A
Pfam	UHGV-1361658_35	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
Pfam	UHGV-1361658_35	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1361658_35	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1361658_35	PF05382,PF01471,NF038080,NF033742,COG3409,COG1388	N/A	N/A	N/A	N/A
KOfam	UHGV-1361658_36	K07813	46.0	0.0000000000006	agrB; accessory gene regulator B	N/A
Pfam	UHGV-1361658_36	PF04647	N/A	N/A	Accessory gene regulator B	AgrB
structural_annotation	UHGV-1361658_36	PF08281,NF001067,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1361658_38	1232452.BAIB02000007_gene1610	150.0	1.34e-39	N/A	N/A
structural_annotation	UHGV-1361658_38	PF10651,COG3470	N/A	N/A	N/A	N/A
PHROG	UHGV-1361658_39	phrog_6782	43.0	0.0000000000023	tail fiber protein	tail
eggNOG-mapper	UHGV-1361658_39	1120998.AUFC01000030_gene2248	73.9	0.00000000000852	N/A	N/A
UniRef90	UHGV-1361658_43	UniRef90_A0A8F0WFQ8	63.5	0.0000000176	Outer capsid protein/viral fiber	N/A
eggNOG-mapper	UHGV-1361658_43	476272.RUMHYD_01770	92.0	3.75e-20	N/A	N/A
PHROG	UHGV-1361658_44	phrog_20016	71.2	1.2e-20	N/A	unknown function
UniRef90	UHGV-1361658_44	UniRef90_A0A395WF88	215.0	0	BclA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1361658_44	1235790.C805_00062	58.9	0.00000000429	N/A	N/A
Pfam	UHGV-1361658_44	PF18573	N/A	N/A	BclA C-terminal domain	BclA_C
structural_annotation	UHGV-1361658_44	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-1361658_46	UniRef90_A0A7M1RRU0	84.3	2.9e-17	RNA polymerase sigma factor/ubiquitin-like protein	N/A
PHROG	UHGV-1361658_47	phrog_93	48.8	0.000000000000084	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361658_47	UniRef90_R2TKS8	76.6	5.34e-16	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1361658_47	1158609.I586_00057	76.6	8.96e-17	Archaeal holliday junction resolvase (hjc)	N/A
COG	UHGV-1361658_47	COG1591	N/A	N/A	Holliday junction resolvase Hjc, archaeal type	N/A
structural_annotation	UHGV-1361658_47	PF08774,NF040854,COG3331	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361658_48	PF05037,NF005674	N/A	N/A	N/A	N/A
PHROG	UHGV-1361658_49	phrog_434	96.4	2.8e-28	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361658_49	UniRef90_A0A1C6L0E5	236.0	0	Putative phage-type endonuclease	N/A
eggNOG-mapper	UHGV-1361658_49	1121866.AUGK01000003_gene1405	221.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-1361658_49	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
COG	UHGV-1361658_49	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1361658_49	PF09588,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-1361658_50	phrog_1252	437.6	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361658_50	UniRef90_R6MZ51	466.0	0	DNA polymerase elongation subunit (Family B)	N/A
eggNOG-mapper	UHGV-1361658_50	1121866.AUGK01000003_gene1403	396.0	0	DNA replication proofreading	N/A
COG	UHGV-1361658_50	COG0417	N/A	N/A	DNA polymerase B elongation subunit	N/A
structural_annotation	UHGV-1361658_50	PF04404,PF08490,MF_04100,TIGR00592,COG0417	N/A	N/A	N/A	N/A
Pfam	UHGV-1361658_51	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
COG	UHGV-1361658_51	COG3311	N/A	N/A	DNA-binding transcriptional regulator AlpA	N/A
structural_annotation	UHGV-1361658_53	PF17457	N/A	N/A	N/A	N/A
KOfam	UHGV-1361658_55	K14440	178.4	0	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-1361658_55	phrog_62	293.4	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361658_55	UniRef90_A0A6G7WZZ8	432.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-1361658_55	1219626.HMPREF1639_07295	357.0	0	SNF2 family N-terminal domain	N/A
PADLOC	UHGV-1361658_55	ZorD1_00007	117.1	5.8e-35	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-1361658_55	PF00270	N/A	N/A	DEAD/DEAH box helicase	DEAD
Pfam	UHGV-1361658_55	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-1361658_55	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1361658_55	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1361658_55	PF00176,PF00271,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361658_56	PF01104,NF041014	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361658_57	PF18300,MF_00085,NF003076	N/A	N/A	N/A	N/A
PHROG	UHGV-1361658_62	phrog_22292	82.5	4.8e-24	N/A	unknown function
PHROG	UHGV-1361658_65	phrog_22529	80.0	1.8e-23	N/A	unknown function
UniRef90	UHGV-1361658_65	UniRef90_UPI001CF89B7F	98.6	4.71e-23	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-1361658_65	742735.HMPREF9467_03282	98.6	5.27e-23	3D domain	N/A
Pfam	UHGV-1361658_65	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-1361658_65	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
eggNOG-mapper	UHGV-1361658_66	428126.CLOSPI_01750	86.3	3.13e-19	N/A	N/A
KOfam	UHGV-1361658_69	K06919	43.6	0.000000000003	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-1361658_69	phrog_864	233.2	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361658_69	UniRef90_A0A1M7S6C1	234.0	0	Putative DNA primase/helicase	N/A
eggNOG-mapper	UHGV-1361658_69	657322.FPR_09510	225.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-1361658_69	PF09250	N/A	N/A	Bifunctional DNA primase/polymerase, N-terminal	Prim-Pol
Pfam	UHGV-1361658_69	PF08708	N/A	N/A	Primase C terminal 1 (PriCT-1)	PriCT_1
Pfam	UHGV-1361658_69	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-1361658_69	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-1361658_69	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-1361658_69	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-1361658_69	PF05272,PF09250,PF08708,MF_00016,NF011296,COG5545	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1361658	Yes	47,501	32	100	1
UHGV-0188897	No	47,498	32	100	1
UHGV-0084268	No	46,745	32	100	1
UHGV-1361254	No	46,745	32	100	1
UHGV-0101061	No	46,722	32	100	1
UHGV-1363106	No	46,722	32	100	1
UHGV-0099712	No	46,678	32	100	1
UHGV-1361462	No	46,678	32	100	1
UHGV-1365000	No	46,439	32	100	1
UHGV-0375785	No	46,316	32	100	1
UHGV-0109616	No	46,261	32	100	1
UHGV-0265239	No	46,072	32	100	1
UHGV-0153538	No	46,031	32	100	1
UHGV-1370752	No	46,031	32	100	1
UHGV-1372153	No	45,664	32	100	1
UHGV-0101154	No	45,401	32	100	1
UHGV-0219487	No	45,401	32	100	1
UHGV-1375755	No	45,401	32	100	1
UHGV-2082533	No	45,401	32	100	1
UHGV-1360265	No	45,186	32	100	1
UHGV-0095231	No	45,000	32	100	1
UHGV-1370560	No	45,000	32	100	1
UHGV-0112042	No	44,964	33	100	1
UHGV-1498214	No	46,885	32	100	1
UHGV-2093898	No	46,726	32	100	1
UHGV-2101266	No	46,360	32	100	1
UHGV-1456517	No	45,978	32	99	1
UHGV-1343365	No	45,850	32	99	1
UHGV-0123883	No	45,775	32	99	1
UHGV-1460756	No	45,698	32	99	1
UHGV-1458638	No	45,673	32	99	1
UHGV-0078799	No	45,509	32	98	1
UHGV-1498513	No	45,509	32	98	1
UHGV-0144885	No	45,428	32	98	1
UHGV-1498417	No	45,428	32	98	1
UHGV-1497147	No	45,350	32	98	1
UHGV-0178882	No	44,022	32	95	1
UHGV-0074133	No	41,515	32	90	1
UHGV-1474632	No	41,515	32	90	1
UHGV-0350273	No	37,648	32	81	1
UHGV-0106908	No	26,848	32	58	1
UHGV-1491357	No	25,486	31	55	1
UHGV-1451660	No	24,664	32	53	1
UHGV-0130341	No	24,297	31	53	1
UHGV-1419903	No	24,297	31	53	1
UHGV-0176574	No	22,958	33	50	1
UHGV-1564425	No	21,518	33	47	1
UHGV-1573097	No	21,479	33	46	1
UHGV-1708204	No	19,765	33	43	1
UHGV-0111163	No	18,327	32	40	1
UHGV-1650320	No	18,327	32	40	1
UHGV-0110628	No	17,436	32	38	1
UHGV-1656597	No	17,089	31	37	1
UHGV-1650508	No	17,032	34	37	1
UHGV-0111157	No	16,313	33	35	1
UHGV-1573653	No	16,313	33	35	1
UHGV-1763337	No	15,693	34	34	1
UHGV-1752646	No	13,562	34	29	1
UHGV-0122885	No	13,003	31	28	1
UHGV-1723923	No	12,981	31	28	1
UHGV-0104987	No	12,735	31	27	1
UHGV-0128064	No	12,487	32	27	1
UHGV-1630628	No	12,487	32	27	1
UHGV-0158800	No	12,444	32	27	1
UHGV-1616938	No	12,444	32	27	1
UHGV-1567776	No	12,126	35	26	1
UHGV-0153302	No	11,458	31	25	1
UHGV-1724134	No	10,572	31	23	1