vOTU vOTU-000352

vOTU: vOTU-000352

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-000352
Number of genomes	30
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00829 → vGENUS-00706 → vSUBGEN-01035 → vOTU-000352
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia → Faecousia sp003525905
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0385463
Biosample ID	N/A
Genome length (bp)	45,218 bps
CheckV completeness	100.00% (Complete)
CDS count	58
CDS density	92.58%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia → Faecousia sp003525905	Total connections	439	Host agreement	87.47
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	16	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0385463_1	1378168.N510_03079	95.1	3.57e-21	N/A	N/A
eggNOG-mapper	UHGV-0385463_2	1408437.JNJN01000043_gene802	139.0	5.57002e-41	N/A	N/A
PHROG	UHGV-0385463_3	phrog_16490	172.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0385463_3	1408437.JNJN01000043_gene803	160.0	1.4013e-45	N/A	N/A
eggNOG-mapper	UHGV-0385463_5	445972.ANACOL_01878	52.8	0.000000885	N/A	N/A
UniRef90	UHGV-0385463_6	UniRef90_U2R3E6	53.1	0.000000222	KORA domain-containing protein	N/A
PHROG	UHGV-0385463_7	phrog_13543	42.2	1.3e-21	N/A	unknown function
UniRef90	UHGV-0385463_7	UniRef90_U2SNH2	1005.0	0	LPD23 domain-containing protein	N/A
eggNOG-mapper	UHGV-0385463_7	1226322.HMPREF1545_00787	1005.0	0	N/A	N/A
Pfam	UHGV-0385463_7	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
Pfam	UHGV-0385463_7	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
eggNOG-mapper	UHGV-0385463_8	1203606.HMPREF1526_02741	97.8	5.47e-20	N/A	N/A
PHROG	UHGV-0385463_9	phrog_156	195.8	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0385463_9	1519439.JPJG01000060_gene1886	507.0	0	N/A	N/A
structural_annotation	UHGV-0385463_9	PF16510,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0385463_10	phrog_511	143.3	1.80067e-42	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0385463_10	1519439.JPJG01000060_gene1903	305.0	0	N/A	N/A
structural_annotation	UHGV-0385463_10	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
KOfam	UHGV-0385463_12	K06909	210.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0385463_12	phrog_3717	186.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0385463_12	UniRef90_UPI001105ADB4	591.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0385463_12	1226322.HMPREF1545_03843	564.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0385463_12	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0385463_12	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0385463_12	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0385463_12	PF04466,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0385463_13	phrog_371	88.6	6.8e-26	major head protein	head and packaging
UniRef90	UHGV-0385463_13	UniRef90_A0A8F2JBL2	192.0	0	Mu-like prophage major head subunit gpT family protein	N/A
eggNOG-mapper	UHGV-0385463_13	1226322.HMPREF1545_03848	244.0	0	N/A	N/A
structural_annotation	UHGV-0385463_13	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0385463_14	phrog_24113	102.8	2e-30	N/A	unknown function
eggNOG-mapper	UHGV-0385463_14	1226322.HMPREF1545_03847	89.0	1.09e-20	N/A	N/A
structural_annotation	UHGV-0385463_14	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-0385463_15	phrog_35275	170.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0385463_15	1226322.HMPREF1545_03846	134.0	5.05e-34	N/A	N/A
PHROG	UHGV-0385463_17	phrog_443	58.7	1.7e-16	holin	lysis
UniRef90	UHGV-0385463_17	UniRef90_UPI0002E2AC7F	96.7	4.69e-25	holin	N/A
eggNOG-mapper	UHGV-0385463_17	1235800.C819_01425	87.8	4.45e-22	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0385463_17	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0385463_17	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0385463_18	phrog_937	62.5	7.9e-18	hemolysin	other
eggNOG-mapper	UHGV-0385463_18	1519439.JPJG01000023_gene533	79.0	8.97e-18	N/A	N/A
KOfam	UHGV-0385463_19	K01447	60.2	3.8e-17	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0385463_19	phrog_15001	163.2	0	endolysin	lysis
UniRef90	UHGV-0385463_19	UniRef90_A0A7X7U879	199.0	0	LysM peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0385463_19	1235835.C814_01292	210.0	0	Ami_2	N/A
Pfam	UHGV-0385463_19	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0385463_19	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0385463_19	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0385463_19	PF18342,PF01510,NF041850,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0385463_20	phrog_2428	141.1	3.09967e-42	N/A	unknown function
UniRef90	UHGV-0385463_20	UniRef90_UPI0019D0F68F	144.0	2.49992e-42	ABC transporter ATPase	N/A
eggNOG-mapper	UHGV-0385463_20	1009370.ALO_12376	134.0	1.63e-38	N/A	N/A
dbAPIS	UHGV-0385463_20	APIS024	N/A	N/A	Tad1 proteins are not an enzymes, but are 'sponges' that bind and sequester the immune signaling molecule (cyclic ADP-ribose or gcADPR) produced by TIR-domain proteins, thus decoupling phage sensing from immune effector activation and rendering Thoeris inactive.	N/A
PHROG	UHGV-0385463_22	phrog_30034	120.2	2e-35	N/A	unknown function
UniRef90	UHGV-0385463_22	UniRef90_A0A3D1XGA4	166.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0385463_22	411471.SUBVAR_06976	97.8	4.23e-24	N/A	N/A
Pfam	UHGV-0385463_22	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
Pfam	UHGV-0385463_24	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-0385463_24	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
structural_annotation	UHGV-0385463_24	PF13306	N/A	N/A	N/A	N/A
KOfam	UHGV-0385463_25	K19719	75.2	1.4e-22	COL2A; collagen type II alpha	N/A
PHROG	UHGV-0385463_25	phrog_5073	141.9	0	tail fiber protein	tail
eggNOG-mapper	UHGV-0385463_25	1519439.JPJG01000060_gene1891	65.1	0.00000000074	N/A	N/A
Pfam	UHGV-0385463_25	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0385463_26	phrog_606	59.0	3.7e-17	terminase small subunit	head and packaging
eggNOG-mapper	UHGV-0385463_26	1226322.HMPREF1545_03842	90.1	6.45e-20	DNA-packaging protein gp3	N/A
Pfam	UHGV-0385463_26	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0385463_26	PF16677	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0385463_27	1226322.HMPREF1545_00288	49.7	0.00000192	N/A	N/A
Pfam	UHGV-0385463_27	PF05225	N/A	N/A	helix-turn-helix, Psq domain	HTH_psq
PHROG	UHGV-0385463_28	phrog_3584	105.9	3.9e-31	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0385463_28	1226322.HMPREF1545_03841	126.0	3.57e-32	N/A	N/A
structural_annotation	UHGV-0385463_28	PF01446,NF041486	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0385463_29	COG4451	N/A	N/A	N/A	N/A
PHROG	UHGV-0385463_30	phrog_4433	75.2	5.2e-22	N/A	unknown function
COG	UHGV-0385463_30	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
UniRef90	UHGV-0385463_31	UniRef90_UPI00164AED9E	77.0	8.28e-16	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0385463_31	1235798.C817_04600	64.7	0.00000000000867	N/A	N/A
structural_annotation	UHGV-0385463_31	NF040522,COG2944	N/A	N/A	N/A	N/A
KOfam	UHGV-0385463_38	K00558	147.8	2.8026e-45	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0385463_38	phrog_363	231.5	0	DNA methyltransferase	other
UniRef90	UHGV-0385463_38	UniRef90_G4KRB8	300.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-0385463_38	693746.OBV_01900	300.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0385463_38	MTase_II_00058	115.0	1.1e-33	Type II methyltransferase	RM
Pfam	UHGV-0385463_38	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0385463_38	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0385463_38	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0385463_38	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0385463_39	K00390	42.6	3.4e-25	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0385463_39	phrog_424	91.2	8.4e-27	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0385463_39	UniRef90_A0A098AU96	558.0	0	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes	N/A
eggNOG-mapper	UHGV-0385463_39	1235800.C819_02256	491.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0385463_39	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0385463_39	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0385463_39	PF01507,MF_00063,TIGR00434,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0385463_40	phrog_355	63.5	1.7e-18	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0385463_40	UniRef90_A0A2V2FSM6	82.0	8.3e-18	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-0385463_40	40631.O64365_BPN15	78.2	4.15e-17	N/A	N/A
Pfam	UHGV-0385463_40	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0385463_40	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0385463_41	phrog_23265	52.1	0.0000000000000058	N/A	unknown function
eggNOG-mapper	UHGV-0385463_41	391937.NA2_02982	53.5	0.000000397	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0385463_41	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0385463_41	NF007410	N/A	N/A	N/A	N/A
UniRef90	UHGV-0385463_43	UniRef90_A0A098GES5	92.8	1.3e-22	Putative phage associated protein	N/A
structural_annotation	UHGV-0385463_43	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0385463_45	PF07039	N/A	N/A	N/A	N/A
KOfam	UHGV-0385463_54	K22300	41.2	0.000000000033	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-0385463_54	UniRef90_A0A1Q6RKG1	95.9	7.38e-23	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0385463_54	748224.HMPREF9436_01444	95.1	3.61e-23	N/A	N/A
Pfam	UHGV-0385463_54	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0385463_54	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0385463_54	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
Pfam	UHGV-0385463_56	PF09811	N/A	N/A	Essential protein Yae1, N terminal	Yae1_N
Pfam	UHGV-0385463_56	PF02805	N/A	N/A	Metal binding domain of Ada	Ada_Zn_binding
COG	UHGV-0385463_56	COG1525	N/A	N/A	Endonuclease YncB, thermonuclease family	N/A
structural_annotation	UHGV-0385463_56	PF02805	N/A	N/A	N/A	N/A
UniRef90	UHGV-0385463_57	UniRef90_A0A354UMM3	65.9	0.0000000000409	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0385463_57	1449976.KALB_8768	53.1	0.00000137	Cupin domain	N/A
Pfam	UHGV-0385463_57	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0385463_57	COG1917	N/A	N/A	Cupin domain protein related to quercetin dioxygenase	N/A
structural_annotation	UHGV-0385463_57	PF13560,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0385463_58	K14059	259.1	0	int; integrase	N/A
PHROG	UHGV-0385463_58	phrog_1	212.2	0	integrase	integration and excision
UniRef90	UHGV-0385463_58	UniRef90_A0A8J6PFT7	266.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0385463_58	1048834.TC41_1897	143.0	2.23e-36	Arm DNA-binding domain	N/A
Pfam	UHGV-0385463_58	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0385463_58	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0385463_58	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0385463_58	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0385463	Yes	45,218	62	100	1
UHGV-0368520	No	44,752	62	100	1
UHGV-1373306	No	44,437	62	100	1
UHGV-2124240	No	44,356	62	100	1
UHGV-1376696	No	44,213	62	100	1
UHGV-0228827	No	44,207	62	100	1
UHGV-0190560	No	44,041	62	100	1
UHGV-1384859	No	44,041	62	100	1
UHGV-2016422	No	44,041	62	100	1
UHGV-0359640	No	43,763	62	100	1
UHGV-0378780	No	43,758	62	100	1
UHGV-0118681	No	43,348	62	100	1
UHGV-1355831	No	42,123	62	100	1
UHGV-0132673	No	44,753	62	100	1
UHGV-1449971	No	44,671	62	100	1
UHGV-1417029	No	43,319	62	98	1
UHGV-0252252	No	42,281	62	95	1
UHGV-0081000	No	34,896	62	79	1
UHGV-0159976	No	29,189	62	66	1
UHGV-1875837	No	26,998	62	61	1
UHGV-1404547	No	25,148	62	57	1
UHGV-1409209	No	25,061	62	57	1
UHGV-0099407	No	24,541	62	55	1
UHGV-1718669	No	19,852	62	45	1
UHGV-1740458	No	17,911	62	40	1
UHGV-1775894	No	15,402	62	35	1
UHGV-1764589	No	15,232	62	34	1
UHGV-1768564	No	13,931	62	31	1
UHGV-1714966	No	13,048	62	29	1
UHGV-1602509	No	11,812	62	27	1